| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461613
Identifier: 77461613
GI number: 77461613
Start: 6054029
End: 6054781
Strand: Direct
Name: 77461613
Synonym: Pfl01_5392
Alternate gene names: NA
Gene position: 6054029-6054781 (Clockwise)
Preceding gene: 77461610
Following gene: 77461615
Centisome position: 94.03
GC content: 64.94
Gene sequence:
>753_bases ATGCGCCGTTTGCTTTTTTCACTGTTGATGTTCTGCGTTTTGCCCGCCTGGGCGGACGGCCACGACCAGCTGTACAAGGT CGCCGGCTGGCCAGAACAACGCGCGCATTTCAACGACGCCCTGAGTGCCGCGCAGCAGCGTTACCAGAACAGCCTGCCGC CGGCGGTGTTTCAGGCGCTGGTGAACAACAGCAACCAGCGCTTCGCCCCTCAGGCTGTGGATCAACGGGCCGAAGCGCAA CTGCGCAAGAACCTTGCCGATCCGCAACCGGCCCTGTCGTTCTTTCAGTCACCGCTGGGCAAGAAGATCGTCGCCGCCGA ACTGCTGGCGACCCGCCGCGATCAATTGGCAAAGAACGCCAAGGGCCTGCCGAAGATGCCGGCCAGCGACAGCCGCCTGC TGATCATCGGCCACCTCGCCCAGGCCCTGCCCGCCCGTGAAGCCGGTGCCGAAGTCAGCCTGGCGATTGCCGGCGTGGCG GCGGACAGCCTGAGCTCGATGATCCCCGGCCTGCTCGGCGGCGGTCAGGCCCAGGGCATGTTGAACGGTCAACGCCAGCG CCTGATGGATCAGATCGGCGCCGACCTGAACAACACGCTGCTCTACGTCTATCGCGACCTGTCGGATGAAGAGCTGGAAG AGTTCGCGACCTTTGCCGAATCCACCGAAGGCAAGGCCTACTATCAGGCCGCGCTGGCAGCGATCCGCGCCGGGCTCGCC GTGGGCCAGAGCACCTCGAACCTCAGCCAGTGA
Upstream 100 bases:
>100_bases TGCGGCAAGAAATCCGACAGAGCCACGCGGCGGCTTGATACGAATTCTCGACAAGTACTGGCACCGCACGGAGAATAGTC GGCTGCCGACAGGAGTCCTT
Downstream 100 bases:
>100_bases TCTAGGGGTTGCGGCCCTTGATCCGCTTGCTCAAGAACTCGAAATACTCCTCGCGCATTTCCGCCGTTTCATTGGCCAGG TGATGCCGCGCCTCGGCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MRRLLFSLLMFCVLPAWADGHDQLYKVAGWPEQRAHFNDALSAAQQRYQNSLPPAVFQALVNNSNQRFAPQAVDQRAEAQ LRKNLADPQPALSFFQSPLGKKIVAAELLATRRDQLAKNAKGLPKMPASDSRLLIIGHLAQALPAREAGAEVSLAIAGVA ADSLSSMIPGLLGGGQAQGMLNGQRQRLMDQIGADLNNTLLYVYRDLSDEELEEFATFAESTEGKAYYQAALAAIRAGLA VGQSTSNLSQ
Sequences:
>Translated_250_residues MRRLLFSLLMFCVLPAWADGHDQLYKVAGWPEQRAHFNDALSAAQQRYQNSLPPAVFQALVNNSNQRFAPQAVDQRAEAQ LRKNLADPQPALSFFQSPLGKKIVAAELLATRRDQLAKNAKGLPKMPASDSRLLIIGHLAQALPAREAGAEVSLAIAGVA ADSLSSMIPGLLGGGQAQGMLNGQRQRLMDQIGADLNNTLLYVYRDLSDEELEEFATFAESTEGKAYYQAALAAIRAGLA VGQSTSNLSQ >Mature_250_residues MRRLLFSLLMFCVLPAWADGHDQLYKVAGWPEQRAHFNDALSAAQQRYQNSLPPAVFQALVNNSNQRFAPQAVDQRAEAQ LRKNLADPQPALSFFQSPLGKKIVAAELLATRRDQLAKNAKGLPKMPASDSRLLIIGHLAQALPAREAGAEVSLAIAGVA ADSLSSMIPGLLGGGQAQGMLNGQRQRLMDQIGADLNNTLLYVYRDLSDEELEEFATFAESTEGKAYYQAALAAIRAGLA VGQSTSNLSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27019; Mature: 27019
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLLFSLLMFCVLPAWADGHDQLYKVAGWPEQRAHFNDALSAAQQRYQNSLPPAVFQAL CHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH VNNSNQRFAPQAVDQRAEAQLRKNLADPQPALSFFQSPLGKKIVAAELLATRRDQLAKNA HCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KGLPKMPASDSRLLIIGHLAQALPAREAGAEVSLAIAGVAADSLSSMIPGLLGGGQAQGM CCCCCCCCCCCCEEHHHHHHHHCCHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCC LNGQRQRLMDQIGADLNNTLLYVYRDLSDEELEEFATFAESTEGKAYYQAALAAIRAGLA CCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VGQSTSNLSQ HCCCCCCCCC >Mature Secondary Structure MRRLLFSLLMFCVLPAWADGHDQLYKVAGWPEQRAHFNDALSAAQQRYQNSLPPAVFQAL CHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH VNNSNQRFAPQAVDQRAEAQLRKNLADPQPALSFFQSPLGKKIVAAELLATRRDQLAKNA HCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KGLPKMPASDSRLLIIGHLAQALPAREAGAEVSLAIAGVAADSLSSMIPGLLGGGQAQGM CCCCCCCCCCCCEEHHHHHHHHCCHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCC LNGQRQRLMDQIGADLNNTLLYVYRDLSDEELEEFATFAESTEGKAYYQAALAAIRAGLA CCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VGQSTSNLSQ HCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA