| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is ptsP [H]
Identifier: 77461598
GI number: 77461598
Start: 6039311
End: 6041590
Strand: Reverse
Name: ptsP [H]
Synonym: Pfl01_5377
Alternate gene names: 77461598
Gene position: 6041590-6039311 (Counterclockwise)
Preceding gene: 77461599
Following gene: 77461596
Centisome position: 93.84
GC content: 63.38
Gene sequence:
>2280_bases ATGCTCAATACGCTGCGCAAGATCGTCCAGGAAGTTAACTCCGCCAAGGATCTCAAGGCGGCGTTGGGGATTATTGTGTT GCGCGTCAAAGAGGCCATGGGCAGCCAGGTCTGCTCGGTCTACCTGCTTGATCCAGAGACCAACCGCTTCGTGCTGATGG CCACCGAGGGCTTGAACAAGCGCTCGATCGGCAAGGTCAGCATGGCACCCAACGAAGGTCTGGTCGGCCTGGTCGGCACG CGTGAAGAACCCCTGAACCTCGAAAACGCCGCGGATCACCCGCGCTACCGTTACTTCGCCGAAACCGGCGAGGAGCGCTA CGCCTCGTTCCTCGGGGCGCCGATCATTCACCACCGTCGCGTCGTCGGCGTGTTGGTCATCCAGCAGAAAGAACGCCGCC AGTTCGATGAGGGTGAAGAAGCCTTCCTCGTGACCATGAGCGCGCAGCTCGCGGGCGTAATCGCTCACGCCGAGGCCACA GGTTCCATCCGTGGTCTGGGCCGTCAGGGCAAGGGCATCCAGGAAGCCAAGTTCGTCGGCGTGCCGGGTTCACCGGGTGC AGCGGTCGGTACCGCGGTGGTCATGTTGCCACCGGCGGATCTGGACGTGGTGCCGGACAAGACCATCACCGACATCGACG CGGAACTGGCGCTGTTCAAGACCGCCATTGAAGGCGTGCGCGCCGACATGCGTGCGTTGTCGGCCAAACTCGCGACCCAG CTGCGTCCGGAAGAGCGCGCCCTGTTCGATGTCTATCTGATGATGCTTGACGATGCCTCGCTGGGCAGCGAAATCACCAA CGTGATCAAGACCGGGCAGTGGGCCCAGGGCGCGTTGCGTCAGGTCGTGACCGATCACGTCAATCGCTTCGATTTGATGG ACGACGAGTACTTGCGTGAGCGGGCGTCGGACGTCAAGGACCTCGGCCGCCGGCTGCTCGCCTATCTGCAGGAAGAGCGG CAGCAGAACCTGGTCTACCCGGAAAAGACCATTCTGGTCAGCGAAGAACTGACGCCGGCGATGCTCGGCGAGGTGCCGGA AGGCACGCTGGTCGGTCTGGTATCGGTGCTTGGTTCGGGGAACTCGCACGTCGCGATTCTCGCCCGGGCCATGGGCATTC CGACGGTCATGGGTCTGGTCGACCTGCCGTACGCCAAGGTCGACGGCATCGAAATGATCGTCGATGGCACACGAGGCGAG GTCTACACCAACCCCAGCGAAGTGCTGCGCAAGCAGTTCACCGAGGTGGTGGAGGAAGAGAAGCAACTGGCGCTGGGGCT CGATACCCTGCGCGACCTGCCGTGCGTGACCCTCGATGGTCATCGCATGCCGCTATGGGTCAACACCGGCCTGCTGGCCG ATGTGGCGCGGGCGCAGAAGCGCGGCGCCGAAGGCGTTGGTCTGTACCGCACCGAAGTGCCATTCATGATCAACCAGCGC TTCCCGAGCGAGAAGGAACAACTGGCGATCTACCGCGAGCAGCTCGCCGCGTTCCACCCGCAACCGGTGACCATGCGCAG CCTGGACATCGGCGGCGACAAGTCGCTGTCGTACTTCCCGATCAAGGAAGACAACCCGTTCCTCGGCTGGCGCGGGATCC GCGTCACCCTCGACCACCCGGAAATCTTCCTGGTGCAGACCCGCGCGATGCTCAAGGCCAGCGAAGGCCTGAACAACCTG CGAATCCTGCTGCCGATGATCTCCGGCATCCACGAGCTCGAAGAGGCGCTGCACCTGATCCACCGGGCCTGGGGCGAAGT GCGCGACGAAGGCACCGACGTGCCGATGCCGCCGGTGGGCGTGATGATTGAAATTCCGGCGGCGGTCTACCAGACCAAAG AGCTGGCGCGGATGGTGGACTTCCTGTCGGTCGGCTCCAACGACCTGACCCAGTACCTGCTGGCGGTGGACCGCAACAAC CCACGGGTGGCCGATCTCTACGACTACCTGCACCCGGCGGTGCTGCAAGCCCTGCAAACCGTGGTACGCGACGCCCATGC CGAAGGCAAGCCGGTGAGCATCTGCGGCGAGATGGCCGGTGACCCGGCGGCAGCGGTGCTGTTGATGGCGATGGGTTTCG ACAGCCTGTCGATGAACGCCACCAACCTGCCGAAGGTGAAATGGATGCTGCGCCAGATCCACCTGAGCAAGGCCAAGGAT CTGCTGGCGGAACTGATGACCATCGACAACCCGCAGGTCATCCACAGCTCGCTGCAACTGGCGCTGAAGAACCTCGGTCT GGCGAAGATGGTCAATCCGGCGGCGGTCAAACCGCTCTAG
Upstream 100 bases:
>100_bases CAGGTGGTGACATTCAAGCGCGAAGTGTATCGCCGCGCTCTCAAAGAGCTTGCCCCGCGCCTTTTAGCGCGCGACTGACG ACGGAGTTCGACCCCGAGCC
Downstream 100 bases:
>100_bases AAAGACAAGATCGCAGCCTTCGGGCTGCGATCTTCATAGGTCGATCTCCACTTCCCCCAGATGCCCGCCATACGGCCCGA AACTGCGCTCGATCATCCGC
Product: phosphoenolpyruvate-protein phosphotransferase PtsP
Products: NA
Alternate protein names: Enzyme I-Ntr; Phosphotransferase system, enzyme I [H]
Number of amino acids: Translated: 759; Mature: 759
Protein sequence:
>759_residues MLNTLRKIVQEVNSAKDLKAALGIIVLRVKEAMGSQVCSVYLLDPETNRFVLMATEGLNKRSIGKVSMAPNEGLVGLVGT REEPLNLENAADHPRYRYFAETGEERYASFLGAPIIHHRRVVGVLVIQQKERRQFDEGEEAFLVTMSAQLAGVIAHAEAT GSIRGLGRQGKGIQEAKFVGVPGSPGAAVGTAVVMLPPADLDVVPDKTITDIDAELALFKTAIEGVRADMRALSAKLATQ LRPEERALFDVYLMMLDDASLGSEITNVIKTGQWAQGALRQVVTDHVNRFDLMDDEYLRERASDVKDLGRRLLAYLQEER QQNLVYPEKTILVSEELTPAMLGEVPEGTLVGLVSVLGSGNSHVAILARAMGIPTVMGLVDLPYAKVDGIEMIVDGTRGE VYTNPSEVLRKQFTEVVEEEKQLALGLDTLRDLPCVTLDGHRMPLWVNTGLLADVARAQKRGAEGVGLYRTEVPFMINQR FPSEKEQLAIYREQLAAFHPQPVTMRSLDIGGDKSLSYFPIKEDNPFLGWRGIRVTLDHPEIFLVQTRAMLKASEGLNNL RILLPMISGIHELEEALHLIHRAWGEVRDEGTDVPMPPVGVMIEIPAAVYQTKELARMVDFLSVGSNDLTQYLLAVDRNN PRVADLYDYLHPAVLQALQTVVRDAHAEGKPVSICGEMAGDPAAAVLLMAMGFDSLSMNATNLPKVKWMLRQIHLSKAKD LLAELMTIDNPQVIHSSLQLALKNLGLAKMVNPAAVKPL
Sequences:
>Translated_759_residues MLNTLRKIVQEVNSAKDLKAALGIIVLRVKEAMGSQVCSVYLLDPETNRFVLMATEGLNKRSIGKVSMAPNEGLVGLVGT REEPLNLENAADHPRYRYFAETGEERYASFLGAPIIHHRRVVGVLVIQQKERRQFDEGEEAFLVTMSAQLAGVIAHAEAT GSIRGLGRQGKGIQEAKFVGVPGSPGAAVGTAVVMLPPADLDVVPDKTITDIDAELALFKTAIEGVRADMRALSAKLATQ LRPEERALFDVYLMMLDDASLGSEITNVIKTGQWAQGALRQVVTDHVNRFDLMDDEYLRERASDVKDLGRRLLAYLQEER QQNLVYPEKTILVSEELTPAMLGEVPEGTLVGLVSVLGSGNSHVAILARAMGIPTVMGLVDLPYAKVDGIEMIVDGTRGE VYTNPSEVLRKQFTEVVEEEKQLALGLDTLRDLPCVTLDGHRMPLWVNTGLLADVARAQKRGAEGVGLYRTEVPFMINQR FPSEKEQLAIYREQLAAFHPQPVTMRSLDIGGDKSLSYFPIKEDNPFLGWRGIRVTLDHPEIFLVQTRAMLKASEGLNNL RILLPMISGIHELEEALHLIHRAWGEVRDEGTDVPMPPVGVMIEIPAAVYQTKELARMVDFLSVGSNDLTQYLLAVDRNN PRVADLYDYLHPAVLQALQTVVRDAHAEGKPVSICGEMAGDPAAAVLLMAMGFDSLSMNATNLPKVKWMLRQIHLSKAKD LLAELMTIDNPQVIHSSLQLALKNLGLAKMVNPAAVKPL >Mature_759_residues MLNTLRKIVQEVNSAKDLKAALGIIVLRVKEAMGSQVCSVYLLDPETNRFVLMATEGLNKRSIGKVSMAPNEGLVGLVGT REEPLNLENAADHPRYRYFAETGEERYASFLGAPIIHHRRVVGVLVIQQKERRQFDEGEEAFLVTMSAQLAGVIAHAEAT GSIRGLGRQGKGIQEAKFVGVPGSPGAAVGTAVVMLPPADLDVVPDKTITDIDAELALFKTAIEGVRADMRALSAKLATQ LRPEERALFDVYLMMLDDASLGSEITNVIKTGQWAQGALRQVVTDHVNRFDLMDDEYLRERASDVKDLGRRLLAYLQEER QQNLVYPEKTILVSEELTPAMLGEVPEGTLVGLVSVLGSGNSHVAILARAMGIPTVMGLVDLPYAKVDGIEMIVDGTRGE VYTNPSEVLRKQFTEVVEEEKQLALGLDTLRDLPCVTLDGHRMPLWVNTGLLADVARAQKRGAEGVGLYRTEVPFMINQR FPSEKEQLAIYREQLAAFHPQPVTMRSLDIGGDKSLSYFPIKEDNPFLGWRGIRVTLDHPEIFLVQTRAMLKASEGLNNL RILLPMISGIHELEEALHLIHRAWGEVRDEGTDVPMPPVGVMIEIPAAVYQTKELARMVDFLSVGSNDLTQYLLAVDRNN PRVADLYDYLHPAVLQALQTVVRDAHAEGKPVSICGEMAGDPAAAVLLMAMGFDSLSMNATNLPKVKWMLRQIHLSKAKD LLAELMTIDNPQVIHSSLQLALKNLGLAKMVNPAAVKPL
Specific function: Component of the phosphoenolpyruvate-dependent nitrogen- metabolic phosphotransferase system (nitrogen-metabolic PTS), that seems to be involved in regulating nitrogen metabolism. Enzyme I- Ntr transfers the phosphoryl group from phosphoenolpyruvate (PEP)
COG id: COG3605
COG function: function code T; Signal transduction protein containing GAF and PtsI domains
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GAF domain [H]
Homologues:
Organism=Escherichia coli, GI1789193, Length=724, Percent_Identity=42.8176795580111, Blast_Score=586, Evalue=1e-168, Organism=Escherichia coli, GI1788756, Length=552, Percent_Identity=38.2246376811594, Blast_Score=356, Evalue=3e-99, Organism=Escherichia coli, GI1788726, Length=544, Percent_Identity=31.9852941176471, Blast_Score=260, Evalue=2e-70, Organism=Escherichia coli, GI48994992, Length=536, Percent_Identity=31.9029850746269, Blast_Score=242, Evalue=6e-65, Organism=Escherichia coli, GI1787994, Length=394, Percent_Identity=27.6649746192893, Blast_Score=107, Evalue=3e-24, Organism=Escherichia coli, GI226510935, Length=174, Percent_Identity=27.5862068965517, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003018 - InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR008731 - InterPro: IPR015813 [H]
Pfam domain/function: PF01590 GAF; PF05524 PEP-utilisers_N; PF00391 PEP-utilizers; PF02896 PEP-utilizers_C [H]
EC number: =2.7.3.9 [H]
Molecular weight: Translated: 83414; Mature: 83414
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNTLRKIVQEVNSAKDLKAALGIIVLRVKEAMGSQVCSVYLLDPETNRFVLMATEGLNK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCCCC RSIGKVSMAPNEGLVGLVGTREEPLNLENAADHPRYRYFAETGEERYASFLGAPIIHHRR CCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHCCCHHHHHH VVGVLVIQQKERRQFDEGEEAFLVTMSAQLAGVIAHAEATGSIRGLGRQGKGIQEAKFVG EEEHEEECCHHHCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCEEEE VPGSPGAAVGTAVVMLPPADLDVVPDKTITDIDAELALFKTAIEGVRADMRALSAKLATQ CCCCCCHHHCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRPEERALFDVYLMMLDDASLGSEITNVIKTGQWAQGALRQVVTDHVNRFDLMDDEYLRE CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH RASDVKDLGRRLLAYLQEERQQNLVYPEKTILVSEELTPAMLGEVPEGTLVGLVSVLGSG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHCCCCCCHHHHHHHHHCCC NSHVAILARAMGIPTVMGLVDLPYAKVDGIEMIVDGTRGEVYTNPSEVLRKQFTEVVEEE CCHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEEECCCCCEECCHHHHHHHHHHHHHHHH KQLALGLDTLRDLPCVTLDGHRMPLWVNTGLLADVARAQKRGAEGVGLYRTEVPFMINQR HHHHHHHHHHHCCCEEEECCCCCEEEECCCHHHHHHHHHHCCCCCCCEEEECCCEEECCC FPSEKEQLAIYREQLAAFHPQPVTMRSLDIGGDKSLSYFPIKEDNPFLGWRGIRVTLDHP CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCCCCCEEEEEEEEEECCC EIFLVQTRAMLKASEGLNNLRILLPMISGIHELEEALHLIHRAWGEVRDEGTDVPMPPVG CEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC VMIEIPAAVYQTKELARMVDFLSVGSNDLTQYLLAVDRNNPRVADLYDYLHPAVLQALQT EEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH VVRDAHAEGKPVSICGEMAGDPAAAVLLMAMGFDSLSMNATNLPKVKWMLRQIHLSKAKD HHHHHCCCCCCEEEHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LLAELMTIDNPQVIHSSLQLALKNLGLAKMVNPAAVKPL HHHHHHHCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCC >Mature Secondary Structure MLNTLRKIVQEVNSAKDLKAALGIIVLRVKEAMGSQVCSVYLLDPETNRFVLMATEGLNK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCCCC RSIGKVSMAPNEGLVGLVGTREEPLNLENAADHPRYRYFAETGEERYASFLGAPIIHHRR CCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHCCCHHHHHH VVGVLVIQQKERRQFDEGEEAFLVTMSAQLAGVIAHAEATGSIRGLGRQGKGIQEAKFVG EEEHEEECCHHHCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCEEEE VPGSPGAAVGTAVVMLPPADLDVVPDKTITDIDAELALFKTAIEGVRADMRALSAKLATQ CCCCCCHHHCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRPEERALFDVYLMMLDDASLGSEITNVIKTGQWAQGALRQVVTDHVNRFDLMDDEYLRE CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH RASDVKDLGRRLLAYLQEERQQNLVYPEKTILVSEELTPAMLGEVPEGTLVGLVSVLGSG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHCCCCCCHHHHHHHHHCCC NSHVAILARAMGIPTVMGLVDLPYAKVDGIEMIVDGTRGEVYTNPSEVLRKQFTEVVEEE CCHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEEECCCCCEECCHHHHHHHHHHHHHHHH KQLALGLDTLRDLPCVTLDGHRMPLWVNTGLLADVARAQKRGAEGVGLYRTEVPFMINQR HHHHHHHHHHHCCCEEEECCCCCEEEECCCHHHHHHHHHHCCCCCCCEEEECCCEEECCC FPSEKEQLAIYREQLAAFHPQPVTMRSLDIGGDKSLSYFPIKEDNPFLGWRGIRVTLDHP CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCCCCCEEEEEEEEEECCC EIFLVQTRAMLKASEGLNNLRILLPMISGIHELEEALHLIHRAWGEVRDEGTDVPMPPVG CEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC VMIEIPAAVYQTKELARMVDFLSVGSNDLTQYLLAVDRNNPRVADLYDYLHPAVLQALQT EEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH VVRDAHAEGKPVSICGEMAGDPAAAVLLMAMGFDSLSMNATNLPKVKWMLRQIHLSKAKD HHHHHCCCCCCEEEHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LLAELMTIDNPQVIHSSLQLALKNLGLAKMVNPAAVKPL HHHHHHHCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 7896715; 8973315 [H]