| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461577
Identifier: 77461577
GI number: 77461577
Start: 6015161
End: 6016117
Strand: Direct
Name: 77461577
Synonym: Pfl01_5356
Alternate gene names: NA
Gene position: 6015161-6016117 (Clockwise)
Preceding gene: 77461576
Following gene: 77461578
Centisome position: 93.43
GC content: 61.44
Gene sequence:
>957_bases ATGAGCGCCCTCGCCCCGAAGCCGGTCTTTCAGTTCACCCTGAGCGACTGGAACACCCGCGCCTCGGTCCGCACCAGCCC CCACGATTACCACTTGCCGGACAACGTGCAGGAACAACTGGAGACCCGGCACTGGTTTCCGCCGGCGTTCCTGCCCTATC TGGCCCACCCGTCTATTGAAGCAGCGGGCCGTTCGATGCTGCATCGGCTCACGGCCCGACATCTGGTGCATTTTCTCGAC TACACCACGTTGCTCGAACACCGGATCGTCAATCGCGCCGTCGAAACCATCGTGCATGGGGAGCTTCCGGTCGCGGTGCC GGCGCCGATGAAAACCGCCGCGCTCCAGCTCTACACCGACGAGGGCTATCACGCCCTGTTTTCCAGTCAGGTGGCGGAGC AGATCGCCAGCCTCTACGCCATCGCCGGGCGCCCGGTCATGCCCAGACGGATCACCCGGATGAACCTGCTGATCGCACGC ACCGGGCAGGAGCAACGTCCGCTGGCGTGCTTTCTTCTGGGTTTCGTTTCGGAAACCATCATTGCCCGTGAACTGCTGGA TGTCTGCCGCGACAGCCTGGTGTCCGGCGTCAACGACATGTTGCGCGATCACCTCACCGACGAAGCGCGCCACAGCCGCT ATTTCACCGAAGTGTTCCACTACCTCTGGTTGCACCTGAACCCGCGACAGCGAACGTTTACCGCGACGACCTTGCTCGAC ATTCTGGAAATCTTCTTCGACGTGGATGAGCACTGGCTCCAGGAAAGCCTCCGCGGCGCGGGTATTGCAAACACGACGGT GAGGGAGATTCTCGGCACGATGACAACGGCGCAAGCCCGTCGGCAGCGGGCACGGGCCGGCAGCCTCGCCACATTGAGCG CATTGAAAAAAGCCGGATTTTTTACCGAACCTCAAAACCAGACACTATTTGCCAGGGCAGGACTGATCGATGGATGA
Upstream 100 bases:
>100_bases AGAACAGTGCGGAACAACCCTTGTTCTTCGTCGGTTGCGGGGAAAGCGATGGCCAAGCGATGTGTCAGGAAATGCGCGAC CTGCTGCGTGAGGCACAGTC
Downstream 100 bases:
>100_bases CGGACAATCTGTGGTGACCCGACGACAGCGGCGCGGGGCTGTCAGTCTGTTGCTGGCAATGGTGTTGCTCGGCGTCTTTC CCTTGGATGTCCTGCTGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MSALAPKPVFQFTLSDWNTRASVRTSPHDYHLPDNVQEQLETRHWFPPAFLPYLAHPSIEAAGRSMLHRLTARHLVHFLD YTTLLEHRIVNRAVETIVHGELPVAVPAPMKTAALQLYTDEGYHALFSSQVAEQIASLYAIAGRPVMPRRITRMNLLIAR TGQEQRPLACFLLGFVSETIIARELLDVCRDSLVSGVNDMLRDHLTDEARHSRYFTEVFHYLWLHLNPRQRTFTATTLLD ILEIFFDVDEHWLQESLRGAGIANTTVREILGTMTTAQARRQRARAGSLATLSALKKAGFFTEPQNQTLFARAGLIDG
Sequences:
>Translated_318_residues MSALAPKPVFQFTLSDWNTRASVRTSPHDYHLPDNVQEQLETRHWFPPAFLPYLAHPSIEAAGRSMLHRLTARHLVHFLD YTTLLEHRIVNRAVETIVHGELPVAVPAPMKTAALQLYTDEGYHALFSSQVAEQIASLYAIAGRPVMPRRITRMNLLIAR TGQEQRPLACFLLGFVSETIIARELLDVCRDSLVSGVNDMLRDHLTDEARHSRYFTEVFHYLWLHLNPRQRTFTATTLLD ILEIFFDVDEHWLQESLRGAGIANTTVREILGTMTTAQARRQRARAGSLATLSALKKAGFFTEPQNQTLFARAGLIDG >Mature_317_residues SALAPKPVFQFTLSDWNTRASVRTSPHDYHLPDNVQEQLETRHWFPPAFLPYLAHPSIEAAGRSMLHRLTARHLVHFLDY TTLLEHRIVNRAVETIVHGELPVAVPAPMKTAALQLYTDEGYHALFSSQVAEQIASLYAIAGRPVMPRRITRMNLLIART GQEQRPLACFLLGFVSETIIARELLDVCRDSLVSGVNDMLRDHLTDEARHSRYFTEVFHYLWLHLNPRQRTFTATTLLDI LEIFFDVDEHWLQESLRGAGIANTTVREILGTMTTAQARRQRARAGSLATLSALKKAGFFTEPQNQTLFARAGLIDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36034; Mature: 35903
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALAPKPVFQFTLSDWNTRASVRTSPHDYHLPDNVQEQLETRHWFPPAFLPYLAHPSIE CCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCHH AAGRSMLHRLTARHLVHFLDYTTLLEHRIVNRAVETIVHGELPVAVPAPMKTAALQLYTD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHEEEEEC EGYHALFSSQVAEQIASLYAIAGRPVMPRRITRMNLLIARTGQEQRPLACFLLGFVSETI CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHH IARELLDVCRDSLVSGVNDMLRDHLTDEARHSRYFTEVFHYLWLHLNPRQRTFTATTLLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH ILEIFFDVDEHWLQESLRGAGIANTTVREILGTMTTAQARRQRARAGSLATLSALKKAGF HHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC FTEPQNQTLFARAGLIDG CCCCCCCEEEEECCCCCC >Mature Secondary Structure SALAPKPVFQFTLSDWNTRASVRTSPHDYHLPDNVQEQLETRHWFPPAFLPYLAHPSIE CCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCHH AAGRSMLHRLTARHLVHFLDYTTLLEHRIVNRAVETIVHGELPVAVPAPMKTAALQLYTD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHEEEEEC EGYHALFSSQVAEQIASLYAIAGRPVMPRRITRMNLLIARTGQEQRPLACFLLGFVSETI CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHH IARELLDVCRDSLVSGVNDMLRDHLTDEARHSRYFTEVFHYLWLHLNPRQRTFTATTLLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH ILEIFFDVDEHWLQESLRGAGIANTTVREILGTMTTAQARRQRARAGSLATLSALKKAGF HHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC FTEPQNQTLFARAGLIDG CCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA