Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77461567

Identifier: 77461567

GI number: 77461567

Start: 6006341

End: 6006886

Strand: Direct

Name: 77461567

Synonym: Pfl01_5346

Alternate gene names: NA

Gene position: 6006341-6006886 (Clockwise)

Preceding gene: 77461566

Following gene: 77461568

Centisome position: 93.29

GC content: 63.55

Gene sequence:

>546_bases
ATGCACCCAAGCCTGACCGAAACACCTGCCCTGTCGCGCCGTGGGCTGCTGAAATTCAGCCTGGGCGCCACGGCTTTCCT
CGCCACCGCTGGCCTTGGTGCCAGTCTCAGCGGCTGTTCGTCGAGCGTATCGGCCAATGGATTCACCACCCTGCGCAGCG
GCGATCTGCTGTTTCTGCGCGCACTGATTCCAGTGATGCTGGAGGGCGCGGTCGCGGTGGAAAAGATCCCCGCCGCTGTC
GATGGCACCCTGAAGTCGCTGGATTACAGCCTCGACCACCTGTCGCCGGAAATGCTCAAGCTCACCCGGCAACTGTTCGA
TGTGCTGGGCATGGCGGTGACGCGCGGACCATTGACCGGGATCTGGGGCAGTTGGGAAAACGCCAGCCCAGAGGCGATCC
GCCATTTCCTCGAACGCTGGGAAAACAGCTCGCTGAGCCTGCTGCGCATGGGCCACAGCTCATTGCTGCAAATGGTGATG
ATGGCCTGGTACACCCGCGCCGAATCCTGGGCCCATTGCGGTTACCCCGGCCCGCCCGCCGTTTGA

Upstream 100 bases:

>100_bases
CAACGCGGCGAAGCTGATCTACCCGCCCTACGGCAAATCCATTCAGAAACTGATCCAGAAACTGTTCATTCGCTAACGTC
ACCGCCGGGTAATAACAACA

Downstream 100 bases:

>100_bases
GCCTGGCGACCCACGCAAAACAATAATAAGAGAACCTGATCGATGCCCGTACCCGACCCGTTTCGCGAAGGCCTTGCCCG
TGGCTGGAAAACCTACAACG

Product: twin-arginine translocation pathway signal protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MHPSLTETPALSRRGLLKFSLGATAFLATAGLGASLSGCSSSVSANGFTTLRSGDLLFLRALIPVMLEGAVAVEKIPAAV
DGTLKSLDYSLDHLSPEMLKLTRQLFDVLGMAVTRGPLTGIWGSWENASPEAIRHFLERWENSSLSLLRMGHSSLLQMVM
MAWYTRAESWAHCGYPGPPAV

Sequences:

>Translated_181_residues
MHPSLTETPALSRRGLLKFSLGATAFLATAGLGASLSGCSSSVSANGFTTLRSGDLLFLRALIPVMLEGAVAVEKIPAAV
DGTLKSLDYSLDHLSPEMLKLTRQLFDVLGMAVTRGPLTGIWGSWENASPEAIRHFLERWENSSLSLLRMGHSSLLQMVM
MAWYTRAESWAHCGYPGPPAV
>Mature_181_residues
MHPSLTETPALSRRGLLKFSLGATAFLATAGLGASLSGCSSSVSANGFTTLRSGDLLFLRALIPVMLEGAVAVEKIPAAV
DGTLKSLDYSLDHLSPEMLKLTRQLFDVLGMAVTRGPLTGIWGSWENASPEAIRHFLERWENSSLSLLRMGHSSLLQMVM
MAWYTRAESWAHCGYPGPPAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19476; Mature: 19476

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPSLTETPALSRRGLLKFSLGATAFLATAGLGASLSGCSSSVSANGFTTLRSGDLLFLR
CCCCCCCCCCHHHCCCEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHH
ALIPVMLEGAVAVEKIPAAVDGTLKSLDYSLDHLSPEMLKLTRQLFDVLGMAVTRGPLTG
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC
IWGSWENASPEAIRHFLERWENSSLSLLRMGHSSLLQMVMMAWYTRAESWAHCGYPGPPA
CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
V
C
>Mature Secondary Structure
MHPSLTETPALSRRGLLKFSLGATAFLATAGLGASLSGCSSSVSANGFTTLRSGDLLFLR
CCCCCCCCCCHHHCCCEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHH
ALIPVMLEGAVAVEKIPAAVDGTLKSLDYSLDHLSPEMLKLTRQLFDVLGMAVTRGPLTG
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC
IWGSWENASPEAIRHFLERWENSSLSLLRMGHSSLLQMVMMAWYTRAESWAHCGYPGPPA
CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA