Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77461523

Identifier: 77461523

GI number: 77461523

Start: 5962530

End: 5964200

Strand: Reverse

Name: 77461523

Synonym: Pfl01_5302

Alternate gene names: NA

Gene position: 5964200-5962530 (Counterclockwise)

Preceding gene: 77461524

Following gene: 77461522

Centisome position: 92.63

GC content: 63.97

Gene sequence:

>1671_bases
ATGACAACAACCATTTCCCCCGACTCGCGCTGGACGCGGCGGCGTGACGAGAAGCAGCGGCGCCTCGACAAGGTGCGCGG
GCTGGCCGACGGTGCGGTGTTGCCTACCGACAAAATCGTCGCGGCACTCGAAGCGCTGATCCATCCGGGCGACCGTGTGG
TGCTGGAGGGCAATAACCAGAAGCAGGCGGATTTCCTTTCCCGCGCCCTGGCCAAGGCCGATCCGGAAAAGCTCCACGAC
CTGCACATGATCATGCCCAGCGTCGGTCGCTCCGAGCATCTGGACCTGTTCGAACGCGGCATCGCCCGCAAGCTCGATTT
CTCCTTCGCCGGTACCCAGAGCCTGCGCATCAGCCAGTTGCTCGAAGACGGTCTACTGGAGATCGGCGCGATCCACACCT
ACATCGAACTCTACGCCCGGCTGGTGGTGGACCTGATCCCCAACGTCGTGCTCTCGGCCGGGTTCATGGCCGACCGTGCC
GGCAACATATACACCGGCCCGAGCACCGAAGACACCCCGGCGCTGATTGAGCCGGCAGCGTTCAGCGACGGCATCGTCAT
CGTCCAGGTCAATCAACTGGTGGACGACGTCAGCGAACTGCCTCGTGTGGATATTCCGGCATCGTGGGTGGATTTCGTGG
TGGTGGCGGACAAGCCGTTCTACATCGAACCGCTGTTCACGCGCGACCCCCGGCACATCAAGCCTGTGCACGTGCTGATG
GCGATGATGGCGATCCGCGGGATCTACGAAAAACACAACGTGCAGTCGCTGAACCACGGCATCGGTTTCAACACCGCCGC
CATCGAACTGATCCTGCCGACCTACGGCGAATCCCTCGGCCTCAAGGGCAAGATCTGCCGCAACTGGACGCTCAACCCGC
ACCCGACGTTGATCCCGGCGATTGAAAGCGGCTGGGTCGAAAGCGTGCATTGCTTTGGCACCGAACTGGGCATGGAAAAC
TACATCGCCGCCCGGCCCGATGTGTTCTTCACCGGCCGCGACGGCTCGCTGCGTTCCAACCGGATGTTCTGCCAACTGGC
CGGGCAGTACGCGGTGGACCTGTTCATCGGCGCGACCCTGCAGGTCGATGGCGACGGCCATTCCTCCACCGTCACCCGAG
GCCGCCTCGCCGGTTTCGGTGGCGCACCGAACATGGGTCACGATCCGCGCGGTCGCCGTCACGGCACCCCGGCGTGGCTC
GACATGCGCCACGACGACTCGCAGCAACCGATGCTCGAACGCGGCAAGAAACTTGTGGTGCAGATGGTCGAGACGTTCCA
GGAGGGCGGCAAACCGACCTTCGTCGAAACCCTCGACGCGGTAGAGGTGGCGAAGAAAAGCGGGATGCCGCTGGCGCCGA
TCATGATCTACGGCGACGACGTCACTCACCTGCTCACCGAAGAAGGCATCGCCTACCTGTACAAGGCGCGCTCGCTGGAA
GAGCGTCAGGCGATGATCGCTGCGGTCGCTGGCGTCACCGCCATCGGCCTGCGCCATAACCCGAAAGACACCGAACGCAT
GCGCCGCGAAGGCCTGATCGCCTTGCCCGAAGACCTCGGCATCCGTCGCACCGACGCCACCCGCGAACTGCTCGCGGCGA
AGAGCGTGGCCGATCTGGTCGAGTGGTCCGGCGGCCTCTACAACCCGCCCGCCAAGTTCAGGAGCTGGTAA

Upstream 100 bases:

>100_bases
ATCATTACGCTGACCGTAATGATTCACCACCGCGCTTGATTGATGCCCCCACCCGACACTCCTAAGGTAGCTCCACAACA
GCGAACCCCGTGGAGTGAGC

Downstream 100 bases:

>100_bases
TGCACGCACTCAACCTGCAACCGAAAACCATCACCCTCGCGGAACGGCTGGCGGATCTGGCCGTGGACGCGCTGATCGAC
GAAGCCGACCTGTCGCCGAA

Product: malonate decarboxylase subunit alpha

Products: NA

Alternate protein names: Alpha Subunit Of Malonate Decarboxylase; Malonate Decarboxylase Subunit Alpha; Malonate Decarboxylase Alpha-Subunit; Subunit Alpha Of Malonate Decarboxylase

Number of amino acids: Translated: 556; Mature: 555

Protein sequence:

>556_residues
MTTTISPDSRWTRRRDEKQRRLDKVRGLADGAVLPTDKIVAALEALIHPGDRVVLEGNNQKQADFLSRALAKADPEKLHD
LHMIMPSVGRSEHLDLFERGIARKLDFSFAGTQSLRISQLLEDGLLEIGAIHTYIELYARLVVDLIPNVVLSAGFMADRA
GNIYTGPSTEDTPALIEPAAFSDGIVIVQVNQLVDDVSELPRVDIPASWVDFVVVADKPFYIEPLFTRDPRHIKPVHVLM
AMMAIRGIYEKHNVQSLNHGIGFNTAAIELILPTYGESLGLKGKICRNWTLNPHPTLIPAIESGWVESVHCFGTELGMEN
YIAARPDVFFTGRDGSLRSNRMFCQLAGQYAVDLFIGATLQVDGDGHSSTVTRGRLAGFGGAPNMGHDPRGRRHGTPAWL
DMRHDDSQQPMLERGKKLVVQMVETFQEGGKPTFVETLDAVEVAKKSGMPLAPIMIYGDDVTHLLTEEGIAYLYKARSLE
ERQAMIAAVAGVTAIGLRHNPKDTERMRREGLIALPEDLGIRRTDATRELLAAKSVADLVEWSGGLYNPPAKFRSW

Sequences:

>Translated_556_residues
MTTTISPDSRWTRRRDEKQRRLDKVRGLADGAVLPTDKIVAALEALIHPGDRVVLEGNNQKQADFLSRALAKADPEKLHD
LHMIMPSVGRSEHLDLFERGIARKLDFSFAGTQSLRISQLLEDGLLEIGAIHTYIELYARLVVDLIPNVVLSAGFMADRA
GNIYTGPSTEDTPALIEPAAFSDGIVIVQVNQLVDDVSELPRVDIPASWVDFVVVADKPFYIEPLFTRDPRHIKPVHVLM
AMMAIRGIYEKHNVQSLNHGIGFNTAAIELILPTYGESLGLKGKICRNWTLNPHPTLIPAIESGWVESVHCFGTELGMEN
YIAARPDVFFTGRDGSLRSNRMFCQLAGQYAVDLFIGATLQVDGDGHSSTVTRGRLAGFGGAPNMGHDPRGRRHGTPAWL
DMRHDDSQQPMLERGKKLVVQMVETFQEGGKPTFVETLDAVEVAKKSGMPLAPIMIYGDDVTHLLTEEGIAYLYKARSLE
ERQAMIAAVAGVTAIGLRHNPKDTERMRREGLIALPEDLGIRRTDATRELLAAKSVADLVEWSGGLYNPPAKFRSW
>Mature_555_residues
TTTISPDSRWTRRRDEKQRRLDKVRGLADGAVLPTDKIVAALEALIHPGDRVVLEGNNQKQADFLSRALAKADPEKLHDL
HMIMPSVGRSEHLDLFERGIARKLDFSFAGTQSLRISQLLEDGLLEIGAIHTYIELYARLVVDLIPNVVLSAGFMADRAG
NIYTGPSTEDTPALIEPAAFSDGIVIVQVNQLVDDVSELPRVDIPASWVDFVVVADKPFYIEPLFTRDPRHIKPVHVLMA
MMAIRGIYEKHNVQSLNHGIGFNTAAIELILPTYGESLGLKGKICRNWTLNPHPTLIPAIESGWVESVHCFGTELGMENY
IAARPDVFFTGRDGSLRSNRMFCQLAGQYAVDLFIGATLQVDGDGHSSTVTRGRLAGFGGAPNMGHDPRGRRHGTPAWLD
MRHDDSQQPMLERGKKLVVQMVETFQEGGKPTFVETLDAVEVAKKSGMPLAPIMIYGDDVTHLLTEEGIAYLYKARSLEE
RQAMIAAVAGVTAIGLRHNPKDTERMRREGLIALPEDLGIRRTDATRELLAAKSVADLVEWSGGLYNPPAKFRSW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61461; Mature: 61330

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTISPDSRWTRRRDEKQRRLDKVRGLADGAVLPTDKIVAALEALIHPGDRVVLEGNNQ
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCC
KQADFLSRALAKADPEKLHDLHMIMPSVGRSEHLDLFERGIARKLDFSFAGTQSLRISQL
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
LEDGLLEIGAIHTYIELYARLVVDLIPNVVLSAGFMADRAGNIYTGPSTEDTPALIEPAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCEECCCCCCCCCCEECCCC
FSDGIVIVQVNQLVDDVSELPRVDIPASWVDFVVVADKPFYIEPLFTRDPRHIKPVHVLM
CCCCEEEEEHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCHHHHHH
AMMAIRGIYEKHNVQSLNHGIGFNTAAIELILPTYGESLGLKGKICRNWTLNPHPTLIPA
HHHHHHHHHHHCCHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCCCCCCEEEC
IESGWVESVHCFGTELGMENYIAARPDVFFTGRDGSLRSNRMFCQLAGQYAVDLFIGATL
HHCCCHHHHHHHHHHHCHHHHCCCCCCEEEECCCCCCCCCCEEEEECCCCEEEEEEEEEE
QVDGDGHSSTVTRGRLAGFGGAPNMGHDPRGRRHGTPAWLDMRHDDSQQPMLERGKKLVV
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHH
QMVETFQEGGKPTFVETLDAVEVAKKSGMPLAPIMIYGDDVTHLLTEEGIAYLYKARSLE
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH
ERQAMIAAVAGVTAIGLRHNPKDTERMRREGLIALPEDLGIRRTDATRELLAAKSVADLV
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEECCHHCCCCCCHHHHHHHHHHHHHHHH
EWSGGLYNPPAKFRSW
HHCCCCCCCCHHHCCC
>Mature Secondary Structure 
TTTISPDSRWTRRRDEKQRRLDKVRGLADGAVLPTDKIVAALEALIHPGDRVVLEGNNQ
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCC
KQADFLSRALAKADPEKLHDLHMIMPSVGRSEHLDLFERGIARKLDFSFAGTQSLRISQL
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
LEDGLLEIGAIHTYIELYARLVVDLIPNVVLSAGFMADRAGNIYTGPSTEDTPALIEPAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCEECCCCCCCCCCEECCCC
FSDGIVIVQVNQLVDDVSELPRVDIPASWVDFVVVADKPFYIEPLFTRDPRHIKPVHVLM
CCCCEEEEEHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCHHHHHH
AMMAIRGIYEKHNVQSLNHGIGFNTAAIELILPTYGESLGLKGKICRNWTLNPHPTLIPA
HHHHHHHHHHHCCHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCCCCCCEEEC
IESGWVESVHCFGTELGMENYIAARPDVFFTGRDGSLRSNRMFCQLAGQYAVDLFIGATL
HHCCCHHHHHHHHHHHCHHHHCCCCCCEEEECCCCCCCCCCEEEEECCCCEEEEEEEEEE
QVDGDGHSSTVTRGRLAGFGGAPNMGHDPRGRRHGTPAWLDMRHDDSQQPMLERGKKLVV
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHH
QMVETFQEGGKPTFVETLDAVEVAKKSGMPLAPIMIYGDDVTHLLTEEGIAYLYKARSLE
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH
ERQAMIAAVAGVTAIGLRHNPKDTERMRREGLIALPEDLGIRRTDATRELLAAKSVADLV
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEECCHHCCCCCCHHHHHHHHHHHHHHHH
EWSGGLYNPPAKFRSW
HHCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA