| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461523
Identifier: 77461523
GI number: 77461523
Start: 5962530
End: 5964200
Strand: Reverse
Name: 77461523
Synonym: Pfl01_5302
Alternate gene names: NA
Gene position: 5964200-5962530 (Counterclockwise)
Preceding gene: 77461524
Following gene: 77461522
Centisome position: 92.63
GC content: 63.97
Gene sequence:
>1671_bases ATGACAACAACCATTTCCCCCGACTCGCGCTGGACGCGGCGGCGTGACGAGAAGCAGCGGCGCCTCGACAAGGTGCGCGG GCTGGCCGACGGTGCGGTGTTGCCTACCGACAAAATCGTCGCGGCACTCGAAGCGCTGATCCATCCGGGCGACCGTGTGG TGCTGGAGGGCAATAACCAGAAGCAGGCGGATTTCCTTTCCCGCGCCCTGGCCAAGGCCGATCCGGAAAAGCTCCACGAC CTGCACATGATCATGCCCAGCGTCGGTCGCTCCGAGCATCTGGACCTGTTCGAACGCGGCATCGCCCGCAAGCTCGATTT CTCCTTCGCCGGTACCCAGAGCCTGCGCATCAGCCAGTTGCTCGAAGACGGTCTACTGGAGATCGGCGCGATCCACACCT ACATCGAACTCTACGCCCGGCTGGTGGTGGACCTGATCCCCAACGTCGTGCTCTCGGCCGGGTTCATGGCCGACCGTGCC GGCAACATATACACCGGCCCGAGCACCGAAGACACCCCGGCGCTGATTGAGCCGGCAGCGTTCAGCGACGGCATCGTCAT CGTCCAGGTCAATCAACTGGTGGACGACGTCAGCGAACTGCCTCGTGTGGATATTCCGGCATCGTGGGTGGATTTCGTGG TGGTGGCGGACAAGCCGTTCTACATCGAACCGCTGTTCACGCGCGACCCCCGGCACATCAAGCCTGTGCACGTGCTGATG GCGATGATGGCGATCCGCGGGATCTACGAAAAACACAACGTGCAGTCGCTGAACCACGGCATCGGTTTCAACACCGCCGC CATCGAACTGATCCTGCCGACCTACGGCGAATCCCTCGGCCTCAAGGGCAAGATCTGCCGCAACTGGACGCTCAACCCGC ACCCGACGTTGATCCCGGCGATTGAAAGCGGCTGGGTCGAAAGCGTGCATTGCTTTGGCACCGAACTGGGCATGGAAAAC TACATCGCCGCCCGGCCCGATGTGTTCTTCACCGGCCGCGACGGCTCGCTGCGTTCCAACCGGATGTTCTGCCAACTGGC CGGGCAGTACGCGGTGGACCTGTTCATCGGCGCGACCCTGCAGGTCGATGGCGACGGCCATTCCTCCACCGTCACCCGAG GCCGCCTCGCCGGTTTCGGTGGCGCACCGAACATGGGTCACGATCCGCGCGGTCGCCGTCACGGCACCCCGGCGTGGCTC GACATGCGCCACGACGACTCGCAGCAACCGATGCTCGAACGCGGCAAGAAACTTGTGGTGCAGATGGTCGAGACGTTCCA GGAGGGCGGCAAACCGACCTTCGTCGAAACCCTCGACGCGGTAGAGGTGGCGAAGAAAAGCGGGATGCCGCTGGCGCCGA TCATGATCTACGGCGACGACGTCACTCACCTGCTCACCGAAGAAGGCATCGCCTACCTGTACAAGGCGCGCTCGCTGGAA GAGCGTCAGGCGATGATCGCTGCGGTCGCTGGCGTCACCGCCATCGGCCTGCGCCATAACCCGAAAGACACCGAACGCAT GCGCCGCGAAGGCCTGATCGCCTTGCCCGAAGACCTCGGCATCCGTCGCACCGACGCCACCCGCGAACTGCTCGCGGCGA AGAGCGTGGCCGATCTGGTCGAGTGGTCCGGCGGCCTCTACAACCCGCCCGCCAAGTTCAGGAGCTGGTAA
Upstream 100 bases:
>100_bases ATCATTACGCTGACCGTAATGATTCACCACCGCGCTTGATTGATGCCCCCACCCGACACTCCTAAGGTAGCTCCACAACA GCGAACCCCGTGGAGTGAGC
Downstream 100 bases:
>100_bases TGCACGCACTCAACCTGCAACCGAAAACCATCACCCTCGCGGAACGGCTGGCGGATCTGGCCGTGGACGCGCTGATCGAC GAAGCCGACCTGTCGCCGAA
Product: malonate decarboxylase subunit alpha
Products: NA
Alternate protein names: Alpha Subunit Of Malonate Decarboxylase; Malonate Decarboxylase Subunit Alpha; Malonate Decarboxylase Alpha-Subunit; Subunit Alpha Of Malonate Decarboxylase
Number of amino acids: Translated: 556; Mature: 555
Protein sequence:
>556_residues MTTTISPDSRWTRRRDEKQRRLDKVRGLADGAVLPTDKIVAALEALIHPGDRVVLEGNNQKQADFLSRALAKADPEKLHD LHMIMPSVGRSEHLDLFERGIARKLDFSFAGTQSLRISQLLEDGLLEIGAIHTYIELYARLVVDLIPNVVLSAGFMADRA GNIYTGPSTEDTPALIEPAAFSDGIVIVQVNQLVDDVSELPRVDIPASWVDFVVVADKPFYIEPLFTRDPRHIKPVHVLM AMMAIRGIYEKHNVQSLNHGIGFNTAAIELILPTYGESLGLKGKICRNWTLNPHPTLIPAIESGWVESVHCFGTELGMEN YIAARPDVFFTGRDGSLRSNRMFCQLAGQYAVDLFIGATLQVDGDGHSSTVTRGRLAGFGGAPNMGHDPRGRRHGTPAWL DMRHDDSQQPMLERGKKLVVQMVETFQEGGKPTFVETLDAVEVAKKSGMPLAPIMIYGDDVTHLLTEEGIAYLYKARSLE ERQAMIAAVAGVTAIGLRHNPKDTERMRREGLIALPEDLGIRRTDATRELLAAKSVADLVEWSGGLYNPPAKFRSW
Sequences:
>Translated_556_residues MTTTISPDSRWTRRRDEKQRRLDKVRGLADGAVLPTDKIVAALEALIHPGDRVVLEGNNQKQADFLSRALAKADPEKLHD LHMIMPSVGRSEHLDLFERGIARKLDFSFAGTQSLRISQLLEDGLLEIGAIHTYIELYARLVVDLIPNVVLSAGFMADRA GNIYTGPSTEDTPALIEPAAFSDGIVIVQVNQLVDDVSELPRVDIPASWVDFVVVADKPFYIEPLFTRDPRHIKPVHVLM AMMAIRGIYEKHNVQSLNHGIGFNTAAIELILPTYGESLGLKGKICRNWTLNPHPTLIPAIESGWVESVHCFGTELGMEN YIAARPDVFFTGRDGSLRSNRMFCQLAGQYAVDLFIGATLQVDGDGHSSTVTRGRLAGFGGAPNMGHDPRGRRHGTPAWL DMRHDDSQQPMLERGKKLVVQMVETFQEGGKPTFVETLDAVEVAKKSGMPLAPIMIYGDDVTHLLTEEGIAYLYKARSLE ERQAMIAAVAGVTAIGLRHNPKDTERMRREGLIALPEDLGIRRTDATRELLAAKSVADLVEWSGGLYNPPAKFRSW >Mature_555_residues TTTISPDSRWTRRRDEKQRRLDKVRGLADGAVLPTDKIVAALEALIHPGDRVVLEGNNQKQADFLSRALAKADPEKLHDL HMIMPSVGRSEHLDLFERGIARKLDFSFAGTQSLRISQLLEDGLLEIGAIHTYIELYARLVVDLIPNVVLSAGFMADRAG NIYTGPSTEDTPALIEPAAFSDGIVIVQVNQLVDDVSELPRVDIPASWVDFVVVADKPFYIEPLFTRDPRHIKPVHVLMA MMAIRGIYEKHNVQSLNHGIGFNTAAIELILPTYGESLGLKGKICRNWTLNPHPTLIPAIESGWVESVHCFGTELGMENY IAARPDVFFTGRDGSLRSNRMFCQLAGQYAVDLFIGATLQVDGDGHSSTVTRGRLAGFGGAPNMGHDPRGRRHGTPAWLD MRHDDSQQPMLERGKKLVVQMVETFQEGGKPTFVETLDAVEVAKKSGMPLAPIMIYGDDVTHLLTEEGIAYLYKARSLEE RQAMIAAVAGVTAIGLRHNPKDTERMRREGLIALPEDLGIRRTDATRELLAAKSVADLVEWSGGLYNPPAKFRSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61461; Mature: 61330
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTISPDSRWTRRRDEKQRRLDKVRGLADGAVLPTDKIVAALEALIHPGDRVVLEGNNQ CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCC KQADFLSRALAKADPEKLHDLHMIMPSVGRSEHLDLFERGIARKLDFSFAGTQSLRISQL HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHH LEDGLLEIGAIHTYIELYARLVVDLIPNVVLSAGFMADRAGNIYTGPSTEDTPALIEPAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCEECCCCCCCCCCEECCCC FSDGIVIVQVNQLVDDVSELPRVDIPASWVDFVVVADKPFYIEPLFTRDPRHIKPVHVLM CCCCEEEEEHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCHHHHHH AMMAIRGIYEKHNVQSLNHGIGFNTAAIELILPTYGESLGLKGKICRNWTLNPHPTLIPA HHHHHHHHHHHCCHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCCCCCCEEEC IESGWVESVHCFGTELGMENYIAARPDVFFTGRDGSLRSNRMFCQLAGQYAVDLFIGATL HHCCCHHHHHHHHHHHCHHHHCCCCCCEEEECCCCCCCCCCEEEEECCCCEEEEEEEEEE QVDGDGHSSTVTRGRLAGFGGAPNMGHDPRGRRHGTPAWLDMRHDDSQQPMLERGKKLVV EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHH QMVETFQEGGKPTFVETLDAVEVAKKSGMPLAPIMIYGDDVTHLLTEEGIAYLYKARSLE HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH ERQAMIAAVAGVTAIGLRHNPKDTERMRREGLIALPEDLGIRRTDATRELLAAKSVADLV HHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEECCHHCCCCCCHHHHHHHHHHHHHHHH EWSGGLYNPPAKFRSW HHCCCCCCCCHHHCCC >Mature Secondary Structure TTTISPDSRWTRRRDEKQRRLDKVRGLADGAVLPTDKIVAALEALIHPGDRVVLEGNNQ CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCC KQADFLSRALAKADPEKLHDLHMIMPSVGRSEHLDLFERGIARKLDFSFAGTQSLRISQL HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHH LEDGLLEIGAIHTYIELYARLVVDLIPNVVLSAGFMADRAGNIYTGPSTEDTPALIEPAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCEECCCCCCCCCCEECCCC FSDGIVIVQVNQLVDDVSELPRVDIPASWVDFVVVADKPFYIEPLFTRDPRHIKPVHVLM CCCCEEEEEHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCHHHHHH AMMAIRGIYEKHNVQSLNHGIGFNTAAIELILPTYGESLGLKGKICRNWTLNPHPTLIPA HHHHHHHHHHHCCHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCCCCCCEEEC IESGWVESVHCFGTELGMENYIAARPDVFFTGRDGSLRSNRMFCQLAGQYAVDLFIGATL HHCCCHHHHHHHHHHHCHHHHCCCCCCEEEECCCCCCCCCCEEEEECCCCEEEEEEEEEE QVDGDGHSSTVTRGRLAGFGGAPNMGHDPRGRRHGTPAWLDMRHDDSQQPMLERGKKLVV EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHH QMVETFQEGGKPTFVETLDAVEVAKKSGMPLAPIMIYGDDVTHLLTEEGIAYLYKARSLE HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH ERQAMIAAVAGVTAIGLRHNPKDTERMRREGLIALPEDLGIRRTDATRELLAAKSVADLV HHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEECCHHCCCCCCHHHHHHHHHHHHHHHH EWSGGLYNPPAKFRSW HHCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA