| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461472
Identifier: 77461472
GI number: 77461472
Start: 5913408
End: 5914145
Strand: Reverse
Name: 77461472
Synonym: Pfl01_5251
Alternate gene names: NA
Gene position: 5914145-5913408 (Counterclockwise)
Preceding gene: 77461474
Following gene: 77461462
Centisome position: 91.86
GC content: 60.43
Gene sequence:
>738_bases ATGCCGCGATTGCATCGAGCCTTTGCTTTGATCGGATTGCTGTTGCTGGGTCAAAGCGCTGCAGCGGAGAAATTGCGTCT GGTGTTCGACGTCTGGCCGCCCTTTACCGATGACACGCTGGTCAACGGTGGGCTGGCGACCGATATCGTCAGCACGGCCC TGGCTCGTGCCGGTTATGCCAGCGGTTACGAGCAGGTGCCGTGGGCGCGCGCGTTGATGGGGGTTGGCGAAGGACGTTAC GACGTGCTGGTCAACGCCTGGTACAACGACGAGCGCACGAAGCTGGGGCAGTTTTCCGCCGAGTACCTGCTCAATCGCGT GCGCTTCCTCAAGCGCAAGGACGCACCCATCGAATACAACAACCTGCAGGAACTGCACACCTATCCGATTGCAGTGGTGC GCGGCTACGCCTATTCGGCGCCGTTCGATGCTGACTCCGCGTTGCAGAAAGTCCCTGTGCATAACTTTGCCATGGCCGTG CGCATGCTGGCGGCGGACCGGGTCAAGCTGACCTTGGAAGACGAATACGTCGCCCGCTATTACCTGGCCCGGGAATCACC GAAAGTGCGCAACGCGGTGGAGTTTCTGCCCAAGCCGCTGAGCGAGAACAGCCTGCACATCCTGGTCAGCCTGAAGAACC CGCAGCACGAACAGATCGTGGCCGGGTTCGACAAGGCGATTGCATCGATGAAGGCCGATGGCAGCTATGACAAGCTGCTC AGGCAACACGGCATGTGA
Upstream 100 bases:
>100_bases TTCAATGAGCTAAGGTTAGGGCCTGGGATTCGCCGGTAAGGGGCCTTGGGGTTTTGACTGAAAACACGCCGGGCGGCCCG CCCGCTAAGGATTTTCAAGC
Downstream 100 bases:
>100_bases GGCGGCTCAATCTTCGGCTGTGTCTTTGATCAGGTGCGCCGCCAGCGTGCGCAACGGGCCGAGCTGGCGGCAGATCAACG CCAGTTGCGTCTGCACCAGC
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: ABC-Type Amino Acid Transport/Signal Transduction System
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MPRLHRAFALIGLLLLGQSAAAEKLRLVFDVWPPFTDDTLVNGGLATDIVSTALARAGYASGYEQVPWARALMGVGEGRY DVLVNAWYNDERTKLGQFSAEYLLNRVRFLKRKDAPIEYNNLQELHTYPIAVVRGYAYSAPFDADSALQKVPVHNFAMAV RMLAADRVKLTLEDEYVARYYLARESPKVRNAVEFLPKPLSENSLHILVSLKNPQHEQIVAGFDKAIASMKADGSYDKLL RQHGM
Sequences:
>Translated_245_residues MPRLHRAFALIGLLLLGQSAAAEKLRLVFDVWPPFTDDTLVNGGLATDIVSTALARAGYASGYEQVPWARALMGVGEGRY DVLVNAWYNDERTKLGQFSAEYLLNRVRFLKRKDAPIEYNNLQELHTYPIAVVRGYAYSAPFDADSALQKVPVHNFAMAV RMLAADRVKLTLEDEYVARYYLARESPKVRNAVEFLPKPLSENSLHILVSLKNPQHEQIVAGFDKAIASMKADGSYDKLL RQHGM >Mature_244_residues PRLHRAFALIGLLLLGQSAAAEKLRLVFDVWPPFTDDTLVNGGLATDIVSTALARAGYASGYEQVPWARALMGVGEGRYD VLVNAWYNDERTKLGQFSAEYLLNRVRFLKRKDAPIEYNNLQELHTYPIAVVRGYAYSAPFDADSALQKVPVHNFAMAVR MLAADRVKLTLEDEYVARYYLARESPKVRNAVEFLPKPLSENSLHILVSLKNPQHEQIVAGFDKAIASMKADGSYDKLLR QHGM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27485; Mature: 27354
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLHRAFALIGLLLLGQSAAAEKLRLVFDVWPPFTDDTLVNGGLATDIVSTALARAGYA CCHHHHHHHHHHHHHHCCHHHHHHHEEEEECCCCCCCCCEECCCHHHHHHHHHHHHHHCC SGYEQVPWARALMGVGEGRYDVLVNAWYNDERTKLGQFSAEYLLNRVRFLKRKDAPIEYN CCCCCCHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NLQELHTYPIAVVRGYAYSAPFDADSALQKVPVHNFAMAVRMLAADRVKLTLEDEYVARY CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCEEEEECHHHHHHH YLARESPKVRNAVEFLPKPLSENSLHILVSLKNPQHEQIVAGFDKAIASMKADGSYDKLL HHHCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHH RQHGM HHHCC >Mature Secondary Structure PRLHRAFALIGLLLLGQSAAAEKLRLVFDVWPPFTDDTLVNGGLATDIVSTALARAGYA CHHHHHHHHHHHHHHCCHHHHHHHEEEEECCCCCCCCCEECCCHHHHHHHHHHHHHHCC SGYEQVPWARALMGVGEGRYDVLVNAWYNDERTKLGQFSAEYLLNRVRFLKRKDAPIEYN CCCCCCHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NLQELHTYPIAVVRGYAYSAPFDADSALQKVPVHNFAMAVRMLAADRVKLTLEDEYVARY CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCEEEEECHHHHHHH YLARESPKVRNAVEFLPKPLSENSLHILVSLKNPQHEQIVAGFDKAIASMKADGSYDKLL HHHCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHH RQHGM HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA