| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is dbpA [H]
Identifier: 77461469
GI number: 77461469
Start: 5908288
End: 5909724
Strand: Direct
Name: dbpA [H]
Synonym: Pfl01_5248
Alternate gene names: 77461469
Gene position: 5908288-5909724 (Clockwise)
Preceding gene: 77461468
Following gene: 77461470
Centisome position: 91.77
GC content: 62.63
Gene sequence:
>1437_bases GTGGCCAGAGGCTGCTACACTGCGCGACATTTTGTTTTGCAGGCCAGTCCCGTGACCACCATCGCCACCGCTTTTAATAC TTTGCCGCTGTCCGCCGCCATGCTGGCTAACCTCGACTCCCTCGGTTATGCCCAGATGACGCCGATCCAGGCGCAGAGCT TGCCGGTGATCCTCAAGGGGATGGACCTGATCGCCCAGGCCAAGACCGGCAGCGGCAAGACTGCCGCGTTCGGTATCGGC CTGCTGAACCCGATCAATCCGCGCTACTTCGGTTGCCAGGCGCTGGTAATTTGCCCGACTCGCGAACTGGCTGACCAGGT CGCCAAGGAAATCCGCCGTCTGGCCCGTGCCGAAGACAACATCAAGGTCCTGACCCTGTGCGGCGGCGTGTCCTTCGGCC CGCAGATCGGCTCGCTGGAGCACGGCGCGCACATCATCGTCGGCACCCCGGGCCGCATCCAGCAGCACCTGCGCAAGGGT TCGCTGGTCCTCGACGGCCTCAACACGCTGATCCTCGACGAAGCCGACCGCATGCTCGACATGGGTTTCTACGACGCCAT CGAAGACATCATCGAGCAGACCCCGGCCCGTCGTCAGACCCTGCTGTTCTCGGCGACCTACCCGGTGGGCATCAAGCAAC TGGCGTCGAAGTTCATGCGCGATCCGCAAACGGTCAAGGCCGAAGCGTTCCACGACGATACCCAGATCGAGCAGCGCTTC TACGAGATTTCTCCGGAAGAGCGCATGAGTGCGGTGACCAAGGTTCTGCACCACTTCCGTCCGGCCTCCACCGTGGCGTT CTGCTTCACCAAGCAGCAAGTGCAGGAAACTGTCGATCACCTGACCTCCAAAGGCATTTCCGCCGTCGGCCTGCACGGCG ATCTGGAGCAGCGTGACCGCGATCAGGTGTTGGCGATGTTCGCCAACCGCAGTACTTCGGTACTGGTTGCCACCGACGTT GCCGCCCGTGGTCTGGACATTGATGCACTGGACATGGTGATCAACGTCGAACTGGCCCGCGACTCGGAAATCCACATTCA CCGTGTTGGCCGTACCGGTCGTGCCGGCGAGAAAGGCATCGCGGTCAGCCTGGTGGCGCCGTCCGAAGCGCACCGCGCGC AAGCCATCGAACAACTGCAGAAGACCCCGCTGAACTGGGATCAGGTGGACAACCTCAAGTCCCAGGGCGGTGCCCCGCTG CAACCGCCGATGAGCACGCTGTGCATCGCTGGCGGCCGGAAAGACAAGGTACGTCCGGGCGACATTCTTGGCGCACTGAC CGGTGAGGCCGGCATTCCGGGCGCCCAGGTCGGCAAGATCGCGATCTTTGACTTCCAGTCCTATGTGGCCGTCGAGCGCA CCGTGGTCATGCAGGCGCTGCAGCGTTTGAACAACGGCAAGATCAAGGGTCGTTCGCTGCGCGTCCGGGTTTTGTAA
Upstream 100 bases:
>100_bases AAACGCCGGGAAGAACATATCGAGCATTGACCGGGGTCTGCGTGGCGAGGGAACCGGCCCTCGTCACAGGCTTTGCGTTC GTCCAGAACTTTCGAGGAAA
Downstream 100 bases:
>100_bases GCGATCTTCCATCCAAGGAAGATCCCCTGTGGGAGCGAGCCTGCTCGCGATGGCGGACTGTCAGTCAACAACTATGTTGC ATGTGCCGACCTCATCGCGA
Product: ATP-dependent RNA helicase DbpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MARGCYTARHFVLQASPVTTIATAFNTLPLSAAMLANLDSLGYAQMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAFGIG LLNPINPRYFGCQALVICPTRELADQVAKEIRRLARAEDNIKVLTLCGGVSFGPQIGSLEHGAHIIVGTPGRIQQHLRKG SLVLDGLNTLILDEADRMLDMGFYDAIEDIIEQTPARRQTLLFSATYPVGIKQLASKFMRDPQTVKAEAFHDDTQIEQRF YEISPEERMSAVTKVLHHFRPASTVAFCFTKQQVQETVDHLTSKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVATDV AARGLDIDALDMVINVELARDSEIHIHRVGRTGRAGEKGIAVSLVAPSEAHRAQAIEQLQKTPLNWDQVDNLKSQGGAPL QPPMSTLCIAGGRKDKVRPGDILGALTGEAGIPGAQVGKIAIFDFQSYVAVERTVVMQALQRLNNGKIKGRSLRVRVL
Sequences:
>Translated_478_residues MARGCYTARHFVLQASPVTTIATAFNTLPLSAAMLANLDSLGYAQMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAFGIG LLNPINPRYFGCQALVICPTRELADQVAKEIRRLARAEDNIKVLTLCGGVSFGPQIGSLEHGAHIIVGTPGRIQQHLRKG SLVLDGLNTLILDEADRMLDMGFYDAIEDIIEQTPARRQTLLFSATYPVGIKQLASKFMRDPQTVKAEAFHDDTQIEQRF YEISPEERMSAVTKVLHHFRPASTVAFCFTKQQVQETVDHLTSKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVATDV AARGLDIDALDMVINVELARDSEIHIHRVGRTGRAGEKGIAVSLVAPSEAHRAQAIEQLQKTPLNWDQVDNLKSQGGAPL QPPMSTLCIAGGRKDKVRPGDILGALTGEAGIPGAQVGKIAIFDFQSYVAVERTVVMQALQRLNNGKIKGRSLRVRVL >Mature_477_residues ARGCYTARHFVLQASPVTTIATAFNTLPLSAAMLANLDSLGYAQMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAFGIGL LNPINPRYFGCQALVICPTRELADQVAKEIRRLARAEDNIKVLTLCGGVSFGPQIGSLEHGAHIIVGTPGRIQQHLRKGS LVLDGLNTLILDEADRMLDMGFYDAIEDIIEQTPARRQTLLFSATYPVGIKQLASKFMRDPQTVKAEAFHDDTQIEQRFY EISPEERMSAVTKVLHHFRPASTVAFCFTKQQVQETVDHLTSKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVATDVA ARGLDIDALDMVINVELARDSEIHIHRVGRTGRAGEKGIAVSLVAPSEAHRAQAIEQLQKTPLNWDQVDNLKSQGGAPLQ PPMSTLCIAGGRKDKVRPGDILGALTGEAGIPGAQVGKIAIFDFQSYVAVERTVVMQALQRLNNGKIKGRSLRVRVL
Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI45446747, Length=363, Percent_Identity=39.6694214876033, Blast_Score=242, Evalue=5e-64, Organism=Homo sapiens, GI45446743, Length=363, Percent_Identity=39.6694214876033, Blast_Score=242, Evalue=5e-64, Organism=Homo sapiens, GI7661920, Length=377, Percent_Identity=32.8912466843501, Blast_Score=231, Evalue=8e-61, Organism=Homo sapiens, GI50659095, Length=388, Percent_Identity=36.8556701030928, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI13129006, Length=377, Percent_Identity=37.6657824933687, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI4758138, Length=336, Percent_Identity=37.797619047619, Blast_Score=222, Evalue=6e-58, Organism=Homo sapiens, GI164664518, Length=382, Percent_Identity=30.1047120418848, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI148613856, Length=347, Percent_Identity=36.3112391930836, Blast_Score=215, Evalue=8e-56, Organism=Homo sapiens, GI38201710, Length=347, Percent_Identity=36.3112391930836, Blast_Score=215, Evalue=8e-56, Organism=Homo sapiens, GI301171467, Length=366, Percent_Identity=36.0655737704918, Blast_Score=215, Evalue=9e-56, Organism=Homo sapiens, GI87196351, Length=366, Percent_Identity=36.0655737704918, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI301171475, Length=366, Percent_Identity=36.0655737704918, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI21071032, Length=371, Percent_Identity=36.1185983827493, Blast_Score=212, Evalue=7e-55, Organism=Homo sapiens, GI169881239, Length=365, Percent_Identity=36.4383561643836, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI13514809, Length=365, Percent_Identity=36.4383561643836, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI20149629, Length=360, Percent_Identity=35, Blast_Score=209, Evalue=6e-54, Organism=Homo sapiens, GI262118318, Length=371, Percent_Identity=35.0404312668464, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI216548263, Length=371, Percent_Identity=35.0404312668464, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI31542656, Length=376, Percent_Identity=35.3723404255319, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI262231852, Length=371, Percent_Identity=35.0404312668464, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI13518015, Length=371, Percent_Identity=35.0404312668464, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI222352149, Length=360, Percent_Identity=34.1666666666667, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI41327773, Length=357, Percent_Identity=36.4145658263305, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI41327771, Length=383, Percent_Identity=32.6370757180157, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI224593278, Length=370, Percent_Identity=37.2972972972973, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI51094101, Length=350, Percent_Identity=35.1428571428571, Blast_Score=199, Evalue=6e-51, Organism=Homo sapiens, GI164419743, Length=350, Percent_Identity=35.1428571428571, Blast_Score=199, Evalue=7e-51, Organism=Homo sapiens, GI13514831, Length=378, Percent_Identity=35.4497354497354, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI4503529, Length=379, Percent_Identity=33.7730870712401, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI21040371, Length=376, Percent_Identity=30.0531914893617, Blast_Score=192, Evalue=5e-49, Organism=Homo sapiens, GI4758112, Length=376, Percent_Identity=30.8510638297872, Blast_Score=192, Evalue=7e-49, Organism=Homo sapiens, GI18375623, Length=376, Percent_Identity=30.8510638297872, Blast_Score=192, Evalue=7e-49, Organism=Homo sapiens, GI55749865, Length=369, Percent_Identity=31.4363143631436, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI83700235, Length=380, Percent_Identity=33.4210526315789, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI188035877, Length=365, Percent_Identity=32.6027397260274, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI38327634, Length=378, Percent_Identity=33.3333333333333, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI41327779, Length=407, Percent_Identity=29.7297297297297, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI256223453, Length=355, Percent_Identity=30.1408450704225, Blast_Score=176, Evalue=6e-44, Organism=Homo sapiens, GI41327776, Length=356, Percent_Identity=30.6179775280899, Blast_Score=168, Evalue=8e-42, Organism=Homo sapiens, GI6005743, Length=372, Percent_Identity=29.8387096774194, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI17505907, Length=428, Percent_Identity=29.6728971962617, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI8922886, Length=372, Percent_Identity=29.8387096774194, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI62241022, Length=341, Percent_Identity=30.2052785923754, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI164419732, Length=369, Percent_Identity=28.7262872628726, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI38569503, Length=361, Percent_Identity=29.9168975069252, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI38569505, Length=361, Percent_Identity=29.9168975069252, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI9506931, Length=398, Percent_Identity=28.1407035175879, Blast_Score=145, Evalue=9e-35, Organism=Homo sapiens, GI62241024, Length=318, Percent_Identity=30.5031446540881, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI4826686, Length=333, Percent_Identity=31.8318318318318, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI9966805, Length=311, Percent_Identity=31.8327974276527, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI256773275, Length=374, Percent_Identity=29.144385026738, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI20336298, Length=370, Percent_Identity=28.3783783783784, Blast_Score=116, Evalue=4e-26, Organism=Homo sapiens, GI154759257, Length=401, Percent_Identity=25.4364089775561, Blast_Score=99, Evalue=8e-21, Organism=Escherichia coli, GI1787605, Length=457, Percent_Identity=55.5798687089716, Blast_Score=496, Evalue=1e-142, Organism=Escherichia coli, GI87082221, Length=360, Percent_Identity=39.1666666666667, Blast_Score=263, Evalue=2e-71, Organism=Escherichia coli, GI1787016, Length=365, Percent_Identity=38.6301369863014, Blast_Score=239, Evalue=3e-64, Organism=Escherichia coli, GI1790214, Length=389, Percent_Identity=33.1619537275064, Blast_Score=198, Evalue=7e-52, Organism=Escherichia coli, GI1788930, Length=384, Percent_Identity=34.1145833333333, Blast_Score=191, Evalue=6e-50, Organism=Caenorhabditis elegans, GI71995724, Length=377, Percent_Identity=35.0132625994695, Blast_Score=245, Evalue=4e-65, Organism=Caenorhabditis elegans, GI17507121, Length=377, Percent_Identity=34.7480106100796, Blast_Score=244, Evalue=9e-65, Organism=Caenorhabditis elegans, GI17510307, Length=364, Percent_Identity=39.2857142857143, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI115533224, Length=380, Percent_Identity=36.8421052631579, Blast_Score=221, Evalue=5e-58, Organism=Caenorhabditis elegans, GI17510309, Length=364, Percent_Identity=39.2857142857143, Blast_Score=221, Evalue=5e-58, Organism=Caenorhabditis elegans, GI71987143, Length=368, Percent_Identity=32.6086956521739, Blast_Score=221, Evalue=5e-58, Organism=Caenorhabditis elegans, GI71995514, Length=364, Percent_Identity=39.2857142857143, Blast_Score=221, Evalue=6e-58, Organism=Caenorhabditis elegans, GI17555296, Length=373, Percent_Identity=35.9249329758713, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17552114, Length=368, Percent_Identity=30.7065217391304, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI17507877, Length=382, Percent_Identity=36.1256544502618, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI71999646, Length=355, Percent_Identity=34.0845070422535, Blast_Score=204, Evalue=6e-53, Organism=Caenorhabditis elegans, GI71999644, Length=355, Percent_Identity=34.0845070422535, Blast_Score=204, Evalue=1e-52, Organism=Caenorhabditis elegans, GI71995718, Length=380, Percent_Identity=35.2631578947368, Blast_Score=203, Evalue=1e-52, Organism=Caenorhabditis elegans, GI17507879, Length=381, Percent_Identity=35.9580052493438, Blast_Score=201, Evalue=7e-52, Organism=Caenorhabditis elegans, GI17552642, Length=359, Percent_Identity=37.883008356546, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI86570094, Length=371, Percent_Identity=36.6576819407008, Blast_Score=199, Evalue=4e-51, Organism=Caenorhabditis elegans, GI17507881, Length=416, Percent_Identity=33.6538461538462, Blast_Score=198, Evalue=7e-51, Organism=Caenorhabditis elegans, GI17537549, Length=387, Percent_Identity=33.5917312661499, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI32565321, Length=366, Percent_Identity=33.3333333333333, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI71982858, Length=367, Percent_Identity=29.700272479564, Blast_Score=191, Evalue=6e-49, Organism=Caenorhabditis elegans, GI17507945, Length=339, Percent_Identity=37.4631268436578, Blast_Score=189, Evalue=2e-48, Organism=Caenorhabditis elegans, GI17509811, Length=359, Percent_Identity=34.5403899721448, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI193206561, Length=351, Percent_Identity=31.6239316239316, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI115532546, Length=378, Percent_Identity=31.7460317460317, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI115532548, Length=378, Percent_Identity=31.7460317460317, Blast_Score=186, Evalue=3e-47, Organism=Caenorhabditis elegans, GI17510559, Length=383, Percent_Identity=33.9425587467363, Blast_Score=184, Evalue=6e-47, Organism=Caenorhabditis elegans, GI17505370, Length=398, Percent_Identity=30.9045226130653, Blast_Score=177, Evalue=1e-44, Organism=Caenorhabditis elegans, GI17536099, Length=376, Percent_Identity=30.3191489361702, Blast_Score=162, Evalue=4e-40, Organism=Caenorhabditis elegans, GI17536101, Length=376, Percent_Identity=30.3191489361702, Blast_Score=162, Evalue=5e-40, Organism=Caenorhabditis elegans, GI17536103, Length=376, Percent_Identity=30.3191489361702, Blast_Score=157, Evalue=9e-39, Organism=Caenorhabditis elegans, GI17553716, Length=371, Percent_Identity=26.6846361185984, Blast_Score=150, Evalue=1e-36, Organism=Caenorhabditis elegans, GI193208216, Length=380, Percent_Identity=31.3157894736842, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17507641, Length=388, Percent_Identity=29.1237113402062, Blast_Score=135, Evalue=6e-32, Organism=Caenorhabditis elegans, GI17556951, Length=379, Percent_Identity=27.1767810026385, Blast_Score=131, Evalue=1e-30, Organism=Caenorhabditis elegans, GI32564046, Length=375, Percent_Identity=29.3333333333333, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI71982862, Length=202, Percent_Identity=33.1683168316832, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI71990816, Length=385, Percent_Identity=29.6103896103896, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17508543, Length=379, Percent_Identity=27.9683377308707, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI25148291, Length=330, Percent_Identity=29.0909090909091, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI25148203, Length=410, Percent_Identity=24.8780487804878, Blast_Score=115, Evalue=5e-26, Organism=Caenorhabditis elegans, GI25148205, Length=338, Percent_Identity=24.5562130177515, Blast_Score=89, Evalue=5e-18, Organism=Caenorhabditis elegans, GI71987152, Length=104, Percent_Identity=37.5, Blast_Score=88, Evalue=9e-18, Organism=Saccharomyces cerevisiae, GI6324217, Length=358, Percent_Identity=36.5921787709497, Blast_Score=226, Evalue=7e-60, Organism=Saccharomyces cerevisiae, GI6320224, Length=380, Percent_Identity=32.6315789473684, Blast_Score=222, Evalue=8e-59, Organism=Saccharomyces cerevisiae, GI6325138, Length=361, Percent_Identity=35.7340720221607, Blast_Score=216, Evalue=7e-57, Organism=Saccharomyces cerevisiae, GI6324778, Length=377, Percent_Identity=34.4827586206897, Blast_Score=216, Evalue=7e-57, Organism=Saccharomyces cerevisiae, GI6321360, Length=365, Percent_Identity=36.986301369863, Blast_Score=216, Evalue=8e-57, Organism=Saccharomyces cerevisiae, GI6320041, Length=361, Percent_Identity=31.0249307479224, Blast_Score=207, Evalue=4e-54, Organism=Saccharomyces cerevisiae, GI6323021, Length=365, Percent_Identity=36.7123287671233, Blast_Score=204, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6321856, Length=373, Percent_Identity=34.5844504021448, Blast_Score=199, Evalue=7e-52, Organism=Saccharomyces cerevisiae, GI6319618, Length=426, Percent_Identity=31.4553990610329, Blast_Score=191, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6322427, Length=373, Percent_Identity=34.5844504021448, Blast_Score=190, Evalue=5e-49, Organism=Saccharomyces cerevisiae, GI6322912, Length=368, Percent_Identity=33.4239130434783, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6322323, Length=368, Percent_Identity=33.4239130434783, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6320449, Length=362, Percent_Identity=33.1491712707182, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6323947, Length=394, Percent_Identity=32.741116751269, Blast_Score=180, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6324620, Length=401, Percent_Identity=29.925187032419, Blast_Score=179, Evalue=6e-46, Organism=Saccharomyces cerevisiae, GI6321963, Length=374, Percent_Identity=34.2245989304813, Blast_Score=176, Evalue=8e-45, Organism=Saccharomyces cerevisiae, GI6320119, Length=366, Percent_Identity=27.3224043715847, Blast_Score=173, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6321111, Length=391, Percent_Identity=28.1329923273657, Blast_Score=158, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6319714, Length=380, Percent_Identity=27.8947368421053, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6320400, Length=369, Percent_Identity=28.1842818428184, Blast_Score=133, Evalue=7e-32, Organism=Saccharomyces cerevisiae, GI6321267, Length=350, Percent_Identity=28.2857142857143, Blast_Score=132, Evalue=9e-32, Organism=Saccharomyces cerevisiae, GI6322876, Length=445, Percent_Identity=26.5168539325843, Blast_Score=130, Evalue=6e-31, Organism=Saccharomyces cerevisiae, GI6320173, Length=209, Percent_Identity=34.4497607655502, Blast_Score=128, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6323306, Length=452, Percent_Identity=25, Blast_Score=123, Evalue=6e-29, Organism=Drosophila melanogaster, GI24645031, Length=377, Percent_Identity=33.6870026525199, Blast_Score=232, Evalue=4e-61, Organism=Drosophila melanogaster, GI28574962, Length=386, Percent_Identity=36.2694300518135, Blast_Score=224, Evalue=8e-59, Organism=Drosophila melanogaster, GI24644483, Length=364, Percent_Identity=36.2637362637363, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI24644479, Length=364, Percent_Identity=36.2637362637363, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI281361218, Length=364, Percent_Identity=36.2637362637363, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI24644481, Length=364, Percent_Identity=36.2637362637363, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI24662330, Length=351, Percent_Identity=39.031339031339, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI24644487, Length=364, Percent_Identity=36.2637362637363, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI45551833, Length=364, Percent_Identity=36.2637362637363, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI24644485, Length=364, Percent_Identity=36.2637362637363, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI18857967, Length=381, Percent_Identity=35.4330708661417, Blast_Score=215, Evalue=5e-56, Organism=Drosophila melanogaster, GI24585582, Length=360, Percent_Identity=36.1111111111111, Blast_Score=212, Evalue=4e-55, Organism=Drosophila melanogaster, GI21355075, Length=382, Percent_Identity=34.8167539267016, Blast_Score=211, Evalue=1e-54, Organism=Drosophila melanogaster, GI17985987, Length=371, Percent_Identity=35.8490566037736, Blast_Score=211, Evalue=1e-54, Organism=Drosophila melanogaster, GI24584399, Length=362, Percent_Identity=36.4640883977901, Blast_Score=209, Evalue=3e-54, Organism=Drosophila melanogaster, GI28575014, Length=348, Percent_Identity=35.9195402298851, Blast_Score=209, Evalue=3e-54, Organism=Drosophila melanogaster, GI24582080, Length=365, Percent_Identity=33.1506849315069, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI24582078, Length=365, Percent_Identity=33.1506849315069, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI17136248, Length=365, Percent_Identity=33.1506849315069, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI24582075, Length=365, Percent_Identity=33.1506849315069, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI24642151, Length=357, Percent_Identity=34.1736694677871, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI24583281, Length=359, Percent_Identity=30.3621169916435, Blast_Score=196, Evalue=3e-50, Organism=Drosophila melanogaster, GI24584994, Length=382, Percent_Identity=32.7225130890052, Blast_Score=195, Evalue=5e-50, Organism=Drosophila melanogaster, GI24583279, Length=359, Percent_Identity=30.3621169916435, Blast_Score=195, Evalue=6e-50, Organism=Drosophila melanogaster, GI17977678, Length=357, Percent_Identity=34.733893557423, Blast_Score=194, Evalue=8e-50, Organism=Drosophila melanogaster, GI21356161, Length=365, Percent_Identity=36.986301369863, Blast_Score=192, Evalue=5e-49, Organism=Drosophila melanogaster, GI24581954, Length=377, Percent_Identity=30.7692307692308, Blast_Score=191, Evalue=9e-49, Organism=Drosophila melanogaster, GI24581952, Length=377, Percent_Identity=30.7692307692308, Blast_Score=191, Evalue=9e-49, Organism=Drosophila melanogaster, GI24581956, Length=377, Percent_Identity=30.7692307692308, Blast_Score=191, Evalue=9e-49, Organism=Drosophila melanogaster, GI17136814, Length=381, Percent_Identity=34.6456692913386, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI281365720, Length=332, Percent_Identity=35.8433734939759, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI28571808, Length=387, Percent_Identity=32.5581395348837, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI28571809, Length=387, Percent_Identity=32.5581395348837, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI21355559, Length=375, Percent_Identity=34.1333333333333, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI17647335, Length=353, Percent_Identity=30.028328611898, Blast_Score=162, Evalue=4e-40, Organism=Drosophila melanogaster, GI24642822, Length=376, Percent_Identity=28.9893617021277, Blast_Score=152, Evalue=4e-37, Organism=Drosophila melanogaster, GI24666101, Length=375, Percent_Identity=29.3333333333333, Blast_Score=148, Evalue=1e-35, Organism=Drosophila melanogaster, GI24668515, Length=328, Percent_Identity=32.0121951219512, Blast_Score=146, Evalue=3e-35, Organism=Drosophila melanogaster, GI20130173, Length=440, Percent_Identity=27.9545454545455, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI24643725, Length=410, Percent_Identity=26.3414634146341, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI19920478, Length=378, Percent_Identity=27.5132275132275, Blast_Score=115, Evalue=9e-26, Organism=Drosophila melanogaster, GI28571338, Length=219, Percent_Identity=34.2465753424658, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI18859659, Length=219, Percent_Identity=34.2465753424658, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI17136666, Length=406, Percent_Identity=27.0935960591133, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24640164, Length=351, Percent_Identity=22.7920227920228, Blast_Score=91, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 51881; Mature: 51749
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARGCYTARHFVLQASPVTTIATAFNTLPLSAAMLANLDSLGYAQMTPIQAQSLPVILKG CCCCCEEHHEEEEECCCHHHHHHHHHCCCHHHHHHHCCCCCCCCEECCCCCCCCCEEEEC MDLIAQAKTGSGKTAAFGIGLLNPINPRYFGCQALVICPTRELADQVAKEIRRLARAEDN CHHHEECCCCCCCEEEEEEECCCCCCCCEECEEEEEEECCHHHHHHHHHHHHHHHCCCCC IKVLTLCGGVSFGPQIGSLEHGAHIIVGTPGRIQQHLRKGSLVLDGLNTLILDEADRMLD EEEEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCEEEECCHHHHHHHHHHHHH MGFYDAIEDIIEQTPARRQTLLFSATYPVGIKQLASKFMRDPQTVKAEAFHDDTQIEQRF HHHHHHHHHHHHCCCCCHHEEEEEECCCCCHHHHHHHHHCCCCCEEHHHCCCHHHHHHHH YEISPEERMSAVTKVLHHFRPASTVAFCFTKQQVQETVDHLTSKGISAVGLHGDLEQRDR HHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHH DQVLAMFANRSTSVLVATDVAARGLDIDALDMVINVELARDSEIHIHRVGRTGRAGEKGI HHHHHHHHCCCCEEEEEECHHHCCCCCHHEEEEEEEEEECCCCEEEEECCCCCCCCCCCE AVSLVAPSEAHRAQAIEQLQKTPLNWDQVDNLKSQGGAPLQPPMSTLCIAGGRKDKVRPG EEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHEECCCCCCCCCCC DILGALTGEAGIPGAQVGKIAIFDFQSYVAVERTVVMQALQRLNNGKIKGRSLRVRVL HHEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEECCEEEEEEC >Mature Secondary Structure ARGCYTARHFVLQASPVTTIATAFNTLPLSAAMLANLDSLGYAQMTPIQAQSLPVILKG CCCCEEHHEEEEECCCHHHHHHHHHCCCHHHHHHHCCCCCCCCEECCCCCCCCCEEEEC MDLIAQAKTGSGKTAAFGIGLLNPINPRYFGCQALVICPTRELADQVAKEIRRLARAEDN CHHHEECCCCCCCEEEEEEECCCCCCCCEECEEEEEEECCHHHHHHHHHHHHHHHCCCCC IKVLTLCGGVSFGPQIGSLEHGAHIIVGTPGRIQQHLRKGSLVLDGLNTLILDEADRMLD EEEEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCEEEECCHHHHHHHHHHHHH MGFYDAIEDIIEQTPARRQTLLFSATYPVGIKQLASKFMRDPQTVKAEAFHDDTQIEQRF HHHHHHHHHHHHCCCCCHHEEEEEECCCCCHHHHHHHHHCCCCCEEHHHCCCHHHHHHHH YEISPEERMSAVTKVLHHFRPASTVAFCFTKQQVQETVDHLTSKGISAVGLHGDLEQRDR HHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHH DQVLAMFANRSTSVLVATDVAARGLDIDALDMVINVELARDSEIHIHRVGRTGRAGEKGI HHHHHHHHCCCCEEEEEECHHHCCCCCHHEEEEEEEEEECCCCEEEEECCCCCCCCCCCE AVSLVAPSEAHRAQAIEQLQKTPLNWDQVDNLKSQGGAPLQPPMSTLCIAGGRKDKVRPG EEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHEECCCCCCCCCCC DILGALTGEAGIPGAQVGKIAIFDFQSYVAVERTVVMQALQRLNNGKIKGRSLRVRVL HHEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEECCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]