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The map label for this gene is secE [H]

Identifier: 77461313

GI number: 77461313

Start: 5721819

End: 5722187

Strand: Reverse

Name: secE [H]

Synonym: Pfl01_5092

Alternate gene names: 77461313

Gene position: 5722187-5721819 (Counterclockwise)

Preceding gene: 77461314

Following gene: 77461312

Centisome position: 88.88

GC content: 51.22

Gene sequence:

>369_bases
ATGACTCCTAAAGCTGAAGCTCAAGGCTCTCGCTTCGATTTGCTCAAGTGGCTCGTCGTAGTCGCTTTGGTAATTGTTGG
CGTTGTCGGCAATCAGTATTACGCTGCTTCGCCGATCCTGTACCGCGTACTCGCATTGCTTGTCATTGCTGCTGTAGCTG
CCTTTGTAGGTCTGCAGACTGCCAAGGGCAAGTCTTTCTTTGTACTGGTTAAGGAAGCTCGCACCGAGATTCGTAAAGTC
GTATGGCCAACTCGCCAAGAAACGACACAGACCACGCTTATCGTTGTGGCTGTTGTTCTGGTTATGGCGTTGCTGTTGTG
GGGGCTTGATTCCCTGCTCGGCTGGCTTGTTTCCTTGATTGTCGGCTAA

Upstream 100 bases:

>100_bases
GAGCGACGGTCTCCAAAACCGTAGGTTGGGGGTTCGATTCCCTCCTGACCTGCCAGATTCACTCGGTGTGTCTGGCTTTC
TTTTCACAGGATCTTCATAG

Downstream 100 bases:

>100_bases
GGGTGTCCCGTGGCTAAGCGTTGGTACGTTGTGCATGCTTACTCGGGTTACGAGAAGCATGTCATGCGTTCGTTGATCGA
GCGCGTAAAGCTGGCTGGCA

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MTPKAEAQGSRFDLLKWLVVVALVIVGVVGNQYYAASPILYRVLALLVIAAVAAFVGLQTAKGKSFFVLVKEARTEIRKV
VWPTRQETTQTTLIVVAVVLVMALLLWGLDSLLGWLVSLIVG

Sequences:

>Translated_122_residues
MTPKAEAQGSRFDLLKWLVVVALVIVGVVGNQYYAASPILYRVLALLVIAAVAAFVGLQTAKGKSFFVLVKEARTEIRKV
VWPTRQETTQTTLIVVAVVLVMALLLWGLDSLLGWLVSLIVG
>Mature_121_residues
TPKAEAQGSRFDLLKWLVVVALVIVGVVGNQYYAASPILYRVLALLVIAAVAAFVGLQTAKGKSFFVLVKEARTEIRKVV
WPTRQETTQTTLIVVAVVLVMALLLWGLDSLLGWLVSLIVG

Specific function: Essential for protein export [H]

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secE/SEC61-gamma family [H]

Homologues:

Organism=Escherichia coli, GI1790413, Length=124, Percent_Identity=52.4193548387097, Blast_Score=103, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001901
- InterPro:   IPR005807 [H]

Pfam domain/function: PF00584 SecE [H]

EC number: NA

Molecular weight: Translated: 13265; Mature: 13134

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: PS01067 SECE_SEC61G

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPKAEAQGSRFDLLKWLVVVALVIVGVVGNQYYAASPILYRVLALLVIAAVAAFVGLQT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHC
AKGKSFFVLVKEARTEIRKVVWPTRQETTQTTLIVVAVVLVMALLLWGLDSLLGWLVSLI
CCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VG
CC
>Mature Secondary Structure 
TPKAEAQGSRFDLLKWLVVVALVIVGVVGNQYYAASPILYRVLALLVIAAVAAFVGLQT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHC
AKGKSFFVLVKEARTEIRKVVWPTRQETTQTTLIVVAVVLVMALLLWGLDSLLGWLVSLI
CCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]