| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461242
Identifier: 77461242
GI number: 77461242
Start: 5655680
End: 5656144
Strand: Direct
Name: 77461242
Synonym: Pfl01_5021
Alternate gene names: NA
Gene position: 5655680-5656144 (Clockwise)
Preceding gene: 77461229
Following gene: 77461243
Centisome position: 87.84
GC content: 64.95
Gene sequence:
>465_bases ATGTCCCTACGACCGCTCGTTTTGCTCAGTGTTTTCAGCCTGCTGGTGGCCTGTGGCAGCGATGCGCCCAAGCCTCAGCC GCCCACGCCGGGCCCGGCGCCGCAACAGGCGCAGAAAAAAGCCCGGGAAGCCGCTGATCTCGGCCCGCTGCCCGCGTATC AGCGCGAACTGAGCGGCACCCTGCAAGGCGTGCCGGCCGGCGCCGAAGTCGAACTGGCGCTGCTGGTGATCGACGAAAAG GATCGCCCGCAACAATTGCTCGCCAGTTCCAGCCTGATCGGCAACAACCAGATTCTGCCGTTTCACCTGCGCTTCAACCC CGAATCCTTCCCGGTTGGCGCCCGGGTTGAATTGCGCGGCCGCGCCAGCCAGTCCGGCCAGTTGATCCTGCACCTGCCGT CGCAGACCATCACTCAGCCGACCACCCAGGCGCTGGGCCAGCTGCAATTTGTCAAAGCACCATGA
Upstream 100 bases:
>100_bases CATGGTAGCGCATCCCGGTGGCAAGACAAGCCATAGGCTTTGCGGTATACAGACTGCCATGATCGTTTGATCCATGGATT TCATTTTGCTGGAGCCGCCA
Downstream 100 bases:
>100_bases ATGCACCGTCAGACCTGCAACAGTCGCTGGGCGAATTACTCGGCGACGCGCGACTGAAAGCCTGTGCGTTGCCGAACACC GATTTGCAGCTATGGCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSLRPLVLLSVFSLLVACGSDAPKPQPPTPGPAPQQAQKKAREAADLGPLPAYQRELSGTLQGVPAGAEVELALLVIDEK DRPQQLLASSSLIGNNQILPFHLRFNPESFPVGARVELRGRASQSGQLILHLPSQTITQPTTQALGQLQFVKAP
Sequences:
>Translated_154_residues MSLRPLVLLSVFSLLVACGSDAPKPQPPTPGPAPQQAQKKAREAADLGPLPAYQRELSGTLQGVPAGAEVELALLVIDEK DRPQQLLASSSLIGNNQILPFHLRFNPESFPVGARVELRGRASQSGQLILHLPSQTITQPTTQALGQLQFVKAP >Mature_153_residues SLRPLVLLSVFSLLVACGSDAPKPQPPTPGPAPQQAQKKAREAADLGPLPAYQRELSGTLQGVPAGAEVELALLVIDEKD RPQQLLASSSLIGNNQILPFHLRFNPESFPVGARVELRGRASQSGQLILHLPSQTITQPTTQALGQLQFVKAP
Specific function: Unknown
COG id: COG3126
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16411; Mature: 16280
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRPLVLLSVFSLLVACGSDAPKPQPPTPGPAPQQAQKKAREAADLGPLPAYQRELSGT CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCH LQGVPAGAEVELALLVIDEKDRPQQLLASSSLIGNNQILPFHLRFNPESFPVGARVELRG HCCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCEEEECC RASQSGQLILHLPSQTITQPTTQALGQLQFVKAP CCCCCCCEEEECCCCCCCCHHHHHHCCEEEEECC >Mature Secondary Structure SLRPLVLLSVFSLLVACGSDAPKPQPPTPGPAPQQAQKKAREAADLGPLPAYQRELSGT CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCH LQGVPAGAEVELALLVIDEKDRPQQLLASSSLIGNNQILPFHLRFNPESFPVGARVELRG HCCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCEEEECC RASQSGQLILHLPSQTITQPTTQALGQLQFVKAP CCCCCCCEEEECCCCCCCCHHHHHHCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA