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The map label for this gene is yraR [H]

Identifier: 77461205

GI number: 77461205

Start: 5614760

End: 5615401

Strand: Direct

Name: yraR [H]

Synonym: Pfl01_4984

Alternate gene names: 77461205

Gene position: 5614760-5615401 (Clockwise)

Preceding gene: 77461204

Following gene: 77461210

Centisome position: 87.21

GC content: 62.15

Gene sequence:

>642_bases
ATGTACTTGACGCCTCAGCATGTCTTGCTTGCCGGAGCCACCGGATTGACCGGTGAACATCTGCTCGACCGTCTGCTCAA
CGAGCCGACGATCAGCCGCGTCCTTGCCCCCTCACGCCGGCCGCTGGCGGAACATCCGCATCTGGAAAACCCGGTCGGCG
ATCCACAGACGTTCCTTCCACAACTGGCCGGCCGGGTCGACATCGCGTATTGCTGCCTCGGCACCACCATCAAACAGGCT
GGCTCTGAAGAGGCGTTTCGCGCCGTGGATCTGGACATGGTGGTGGCGTTCGCCAAGCGCGCCCGGGAAATGGGCGCAAG
GCACCTGATCGTGATCAGCGCCCTGGGGGCCGATCGTCGGTCCTCGATTTTCTACAACCGGGTCAAAGGCGAGATGGAAT
ACGCGTTGCGCGCGCAGGACTGGCCGCAACTGACCATCTGCCGGCCATCGCTGTTGCTTGGCGAACGCAGCGAGCCCCGT
CTGGGCGAACAGCTTGCCGCGCCATTCTCCAAATTGATTCCCGGCAAATACCGCGGTATCGAAGCCTGCCAACTGGCCCG
CGCCATGTGGCGGTTGGCGCTTGAGGAACAGGACGGAGTGCGGATCGTCGAGTCAGATGAATTGAGAAAGCTCGGCAAGT
AA

Upstream 100 bases:

>100_bases
GCTGCGTAAACAGCAAGCGAGAAAAGCCTTGCAAAGTGCTGCGTTGAACGACGGAGCGACAAAGAGCAACTAAGCTGAAC
AGTATCAAGGGAGAGACACT

Downstream 100 bases:

>100_bases
AAACAAAAAATCGCAGCCATCGGCTGCGATCTTTTTAGAGCCCGCCTGTCGCCTGAAAGCCTACGCCGATCACTGTCAGC
AACGACAACGGCAACAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MYLTPQHVLLAGATGLTGEHLLDRLLNEPTISRVLAPSRRPLAEHPHLENPVGDPQTFLPQLAGRVDIAYCCLGTTIKQA
GSEEAFRAVDLDMVVAFAKRAREMGARHLIVISALGADRRSSIFYNRVKGEMEYALRAQDWPQLTICRPSLLLGERSEPR
LGEQLAAPFSKLIPGKYRGIEACQLARAMWRLALEEQDGVRIVESDELRKLGK

Sequences:

>Translated_213_residues
MYLTPQHVLLAGATGLTGEHLLDRLLNEPTISRVLAPSRRPLAEHPHLENPVGDPQTFLPQLAGRVDIAYCCLGTTIKQA
GSEEAFRAVDLDMVVAFAKRAREMGARHLIVISALGADRRSSIFYNRVKGEMEYALRAQDWPQLTICRPSLLLGERSEPR
LGEQLAAPFSKLIPGKYRGIEACQLARAMWRLALEEQDGVRIVESDELRKLGK
>Mature_213_residues
MYLTPQHVLLAGATGLTGEHLLDRLLNEPTISRVLAPSRRPLAEHPHLENPVGDPQTFLPQLAGRVDIAYCCLGTTIKQA
GSEEAFRAVDLDMVVAFAKRAREMGARHLIVISALGADRRSSIFYNRVKGEMEYALRAQDWPQLTICRPSLLLGERSEPR
LGEQLAAPFSKLIPGKYRGIEACQLARAMWRLALEEQDGVRIVESDELRKLGK

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To yeast YER004W [H]

Homologues:

Organism=Homo sapiens, GI148728172, Length=222, Percent_Identity=30.1801801801802, Blast_Score=97, Evalue=9e-21,
Organism=Homo sapiens, GI148728168, Length=222, Percent_Identity=30.1801801801802, Blast_Score=97, Evalue=9e-21,
Organism=Homo sapiens, GI148728164, Length=222, Percent_Identity=30.1801801801802, Blast_Score=97, Evalue=9e-21,
Organism=Homo sapiens, GI148728166, Length=222, Percent_Identity=30.1801801801802, Blast_Score=96, Evalue=2e-20,
Organism=Escherichia coli, GI87082218, Length=208, Percent_Identity=50.9615384615385, Blast_Score=207, Evalue=5e-55,
Organism=Caenorhabditis elegans, GI71983631, Length=210, Percent_Identity=30.952380952381, Blast_Score=96, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000534 [H]

Pfam domain/function: PF01118 Semialdhyde_dh [H]

EC number: NA

Molecular weight: Translated: 23707; Mature: 23707

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLTPQHVLLAGATGLTGEHLLDRLLNEPTISRVLAPSRRPLAEHPHLENPVGDPQTFLP
CCCCCCHHEEECCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
QLAGRVDIAYCCLGTTIKQAGSEEAFRAVDLDMVVAFAKRAREMGARHLIVISALGADRR
HHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCH
SSIFYNRVKGEMEYALRAQDWPQLTICRPSLLLGERSEPRLGEQLAAPFSKLIPGKYRGI
HHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCH
EACQLARAMWRLALEEQDGVRIVESDELRKLGK
HHHHHHHHHHHHHHCCCCCCEEECCHHHHHCCC
>Mature Secondary Structure
MYLTPQHVLLAGATGLTGEHLLDRLLNEPTISRVLAPSRRPLAEHPHLENPVGDPQTFLP
CCCCCCHHEEECCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
QLAGRVDIAYCCLGTTIKQAGSEEAFRAVDLDMVVAFAKRAREMGARHLIVISALGADRR
HHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCH
SSIFYNRVKGEMEYALRAQDWPQLTICRPSLLLGERSEPRLGEQLAAPFSKLIPGKYRGI
HHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCH
EACQLARAMWRLALEEQDGVRIVESDELRKLGK
HHHHHHHHHHHHHHCCCCCCEEECCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]