| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461204
Identifier: 77461204
GI number: 77461204
Start: 5613005
End: 5614732
Strand: Direct
Name: 77461204
Synonym: Pfl01_4983
Alternate gene names: NA
Gene position: 5613005-5614732 (Clockwise)
Preceding gene: 77461203
Following gene: 77461205
Centisome position: 87.18
GC content: 63.77
Gene sequence:
>1728_bases ATGCGCTCATTCGCCCCTCTTGCTCCCCTTGCCTTGACCCTGTTGCTGGCCGCGTGTGGCGACGGCGAATCGCTGTTGCC GCCGGATGCGCGCCTGCCCGACGGCGGCCGCTATCGCGGTGAACTGGTCGATGGCTTGCTGCAAGGTCAGGGCCGGGTCG ACTACCCCAACGGCAGCTGGTACGCCGGGGCGTTCGACAAGGGGCAATGGCATGGCCAGGGCGAATGGCATGGCAGCAAT GGCGAGGTCTATCGCGGCAACTTCCAGCAAGGGCTGTTCGACGGCCAGGGCACATTGACCACCACGGCAGGCAGCTACAC CGGCGGTTTCAAGCAGGGCCGGCGCGAAGGCGAAGGCACCCTCAAAGAAAACGCGATGACCTATCGCGGCGAGTTCAAGG CCGACCAGTATTCCGGTCTCGGTCGCCTCGAGCTGGATGACGGCAGCTCTTACCAGGGCCAGTTCGCCCACGGCAAACCC AACGGCGAAGGCCAGCGCGGCGATGCCAGCGGCAATCAGTTCACCGGCCACTTCGTCAATGGCCAGCTCGAAGGCAACGG CACCTTCAACAGTGCCGACGGCGACATCTACGTCGGCGGCTTCAAGAACAATCAACTGCACGGCAAAGGCCGCTACGAAA ACGCCGACGGCGATGTGTGGCTCGGGCAGTTCAAGGAAGGCGCGCTGACCGGCAAGGGCGAACTGATCGGCGCCGACGGC AGCCACTACATCGGCTACTTCAACGACTGGCGCTTCAGCGGTCAGGGTCGCCTGAACCTGTCCGATGGCAGTTTCTACGT CGGTGGATTCGACAGCGACAGTTATTCCGGACGCGGCACCCTGGTGCTCACCGATGGCAGCGTGCTCAGCGGCACCTGGA TCAACGGCCAGCGGGTACGCGATGCCGACGGCAAGTTGCTGCCGGACACCCTCGAACTCGGCCTGCTGGCCCAAGGTCGC CTGCTCGATGAAGCGCTGGCCAATGTGCCGGCCTCGACCCCGGCAGTGGAGCTGTACACCCTGACCCTCGGCGGCGATGG CAAGCAGAGCGTGTTCCTGCGCGAATCCGATTACGTCGCGAACATGCTCACCAGCCGTTTCGGTGCCTTTGGCCAGATTC GCCTGGTCAACCACCGCGACCACCTCGGCGACCGGCCGATGGCCACTCGTGAGAACCTGCGCCGCGCAGCCCTGACCCTG GCCGAACGCAGTGGCCCGGAAGATCTGGTCTTCATTTACCTGACCAGCCACGGCACCGCCGAGCACGAACTGGTGCTCGA CCAGCCGCGCATGGAGCTGGCCGACCTGCCCGCCGACGAACTCGCCGCCGTGCTCGCGCCGCTGAAGAATCGCGACAAGA TCATTGTCATTTCCTCGTGCTATTCCGGGGGCTTCATTCCGGCGTTGAAGGATGAACGCACTCTGATCATGACCGCCTCG CGCGCCGATCGAGTGTCGTTCGGCTGCTCCGAGGAGGCCAACTTCACCTACTTCGGCGACGCCCTGTTTGCCCAGGCGCT GAACCAGACCGACGACCTGGAACAAGCCTTCAAACTGGCCAAGGCCACCGTCGCCGAGCGCGAACTGGCGGACAATTTCG AAGCCTCTGAACCGCAGATCTGGGCGCCGAAAACCGTGCTGGCGCACTGGCAACTGCTGCGTAAACAGCAAGCGAGAAAA GCCTTGCAAAGTGCTGCGTTGAACGACGGAGCGACAAAGAGCAACTAA
Upstream 100 bases:
>100_bases GCGAAACGGCTCACGCTGTTTCGCATCCGCTCCTCCCTGCCGGCTGTATAAGGTCACATAGCTGCGGCATACTCGGTCGC CTAATTGCCCGGATCCCGCT
Downstream 100 bases:
>100_bases GCTGAACAGTATCAAGGGAGAGACACTATGTACTTGACGCCTCAGCATGTCTTGCTTGCCGGAGCCACCGGATTGACCGG TGAACATCTGCTCGACCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase; Morn Repeat Protein; Phosphatidylinositol-4-Phosphate 5-Kinase; MORN Repeat Protein; MORN Motif-Containing Protein; MORN Domain-Containing Protein; MORN Repeat Family Protein; Morn Repeat-Containing Protein; Cytoplasmic Protein; PEGA Domain-Containing Protein; Phosphatidylinositol 4-Phosphate 5-Kinase; MorN Domain-Containing Protein; Morn Motif-Containing Protein; Asparaginyl Peptidase
Number of amino acids: Translated: 575; Mature: 575
Protein sequence:
>575_residues MRSFAPLAPLALTLLLAACGDGESLLPPDARLPDGGRYRGELVDGLLQGQGRVDYPNGSWYAGAFDKGQWHGQGEWHGSN GEVYRGNFQQGLFDGQGTLTTTAGSYTGGFKQGRREGEGTLKENAMTYRGEFKADQYSGLGRLELDDGSSYQGQFAHGKP NGEGQRGDASGNQFTGHFVNGQLEGNGTFNSADGDIYVGGFKNNQLHGKGRYENADGDVWLGQFKEGALTGKGELIGADG SHYIGYFNDWRFSGQGRLNLSDGSFYVGGFDSDSYSGRGTLVLTDGSVLSGTWINGQRVRDADGKLLPDTLELGLLAQGR LLDEALANVPASTPAVELYTLTLGGDGKQSVFLRESDYVANMLTSRFGAFGQIRLVNHRDHLGDRPMATRENLRRAALTL AERSGPEDLVFIYLTSHGTAEHELVLDQPRMELADLPADELAAVLAPLKNRDKIIVISSCYSGGFIPALKDERTLIMTAS RADRVSFGCSEEANFTYFGDALFAQALNQTDDLEQAFKLAKATVAERELADNFEASEPQIWAPKTVLAHWQLLRKQQARK ALQSAALNDGATKSN
Sequences:
>Translated_575_residues MRSFAPLAPLALTLLLAACGDGESLLPPDARLPDGGRYRGELVDGLLQGQGRVDYPNGSWYAGAFDKGQWHGQGEWHGSN GEVYRGNFQQGLFDGQGTLTTTAGSYTGGFKQGRREGEGTLKENAMTYRGEFKADQYSGLGRLELDDGSSYQGQFAHGKP NGEGQRGDASGNQFTGHFVNGQLEGNGTFNSADGDIYVGGFKNNQLHGKGRYENADGDVWLGQFKEGALTGKGELIGADG SHYIGYFNDWRFSGQGRLNLSDGSFYVGGFDSDSYSGRGTLVLTDGSVLSGTWINGQRVRDADGKLLPDTLELGLLAQGR LLDEALANVPASTPAVELYTLTLGGDGKQSVFLRESDYVANMLTSRFGAFGQIRLVNHRDHLGDRPMATRENLRRAALTL AERSGPEDLVFIYLTSHGTAEHELVLDQPRMELADLPADELAAVLAPLKNRDKIIVISSCYSGGFIPALKDERTLIMTAS RADRVSFGCSEEANFTYFGDALFAQALNQTDDLEQAFKLAKATVAERELADNFEASEPQIWAPKTVLAHWQLLRKQQARK ALQSAALNDGATKSN >Mature_575_residues MRSFAPLAPLALTLLLAACGDGESLLPPDARLPDGGRYRGELVDGLLQGQGRVDYPNGSWYAGAFDKGQWHGQGEWHGSN GEVYRGNFQQGLFDGQGTLTTTAGSYTGGFKQGRREGEGTLKENAMTYRGEFKADQYSGLGRLELDDGSSYQGQFAHGKP NGEGQRGDASGNQFTGHFVNGQLEGNGTFNSADGDIYVGGFKNNQLHGKGRYENADGDVWLGQFKEGALTGKGELIGADG SHYIGYFNDWRFSGQGRLNLSDGSFYVGGFDSDSYSGRGTLVLTDGSVLSGTWINGQRVRDADGKLLPDTLELGLLAQGR LLDEALANVPASTPAVELYTLTLGGDGKQSVFLRESDYVANMLTSRFGAFGQIRLVNHRDHLGDRPMATRENLRRAALTL AERSGPEDLVFIYLTSHGTAEHELVLDQPRMELADLPADELAAVLAPLKNRDKIIVISSCYSGGFIPALKDERTLIMTAS RADRVSFGCSEEANFTYFGDALFAQALNQTDDLEQAFKLAKATVAERELADNFEASEPQIWAPKTVLAHWQLLRKQQARK ALQSAALNDGATKSN
Specific function: Unknown
COG id: COG4642
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI13376267, Length=189, Percent_Identity=35.4497354497354, Blast_Score=104, Evalue=3e-22, Organism=Homo sapiens, GI157502187, Length=249, Percent_Identity=27.710843373494, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI153792461, Length=249, Percent_Identity=27.710843373494, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI40316935, Length=231, Percent_Identity=28.5714285714286, Blast_Score=83, Evalue=7e-16, Organism=Homo sapiens, GI299523224, Length=382, Percent_Identity=25.6544502617801, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI33359215, Length=382, Percent_Identity=25.6544502617801, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI149999376, Length=117, Percent_Identity=39.3162393162393, Blast_Score=69, Evalue=2e-11, Organism=Homo sapiens, GI30520314, Length=117, Percent_Identity=39.3162393162393, Blast_Score=69, Evalue=2e-11, Organism=Drosophila melanogaster, GI21358361, Length=213, Percent_Identity=32.3943661971831, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI24654677, Length=186, Percent_Identity=30.6451612903226, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62229; Mature: 62229
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSFAPLAPLALTLLLAACGDGESLLPPDARLPDGGRYRGELVDGLLQGQGRVDYPNGSW CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCE YAGAFDKGQWHGQGEWHGSNGEVYRGNFQQGLFDGQGTLTTTAGSYTGGFKQGRREGEGT EECCCCCCEECCCCCEECCCCCEEECCHHCCCCCCCCEEEEECCCCCCCHHHCCCCCCCC LKENAMTYRGEFKADQYSGLGRLELDDGSSYQGQFAHGKPNGEGQRGDASGNQFTGHFVN HHHCCEEECCCCCCHHHCCCCEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEEEE GQLEGNGTFNSADGDIYVGGFKNNQLHGKGRYENADGDVWLGQFKEGALTGKGELIGADG EEEECCCCCCCCCCCEEEECCCCCEECCCCCCCCCCCCEEEECCCCCCCCCCCCEEECCC SHYIGYFNDWRFSGQGRLNLSDGSFYVGGFDSDSYSGRGTLVLTDGSVLSGTWINGQRVR CCEEEEEECEEECCCCEEEECCCCEEEECCCCCCCCCCEEEEEECCCEEEEEEECCCEEE DADGKLLPDTLELGLLAQGRLLDEALANVPASTPAVELYTLTLGGDGKQSVFLRESDYVA CCCCCCCCHHHHHCEECCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEECCHHHH NMLTSRFGAFGQIRLVNHRDHLGDRPMATRENLRRAALTLAERSGPEDLVFIYLTSHGTA HHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC EHELVLDQPRMELADLPADELAAVLAPLKNRDKIIVISSCYSGGFIPALKDERTLIMTAS CCEEEECCCCHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEC RADRVSFGCSEEANFTYFGDALFAQALNQTDDLEQAFKLAKATVAERELADNFEASEPQI CCCCEECCCCCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE WAPKTVLAHWQLLRKQQARKALQSAALNDGATKSN ECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRSFAPLAPLALTLLLAACGDGESLLPPDARLPDGGRYRGELVDGLLQGQGRVDYPNGSW CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCE YAGAFDKGQWHGQGEWHGSNGEVYRGNFQQGLFDGQGTLTTTAGSYTGGFKQGRREGEGT EECCCCCCEECCCCCEECCCCCEEECCHHCCCCCCCCEEEEECCCCCCCHHHCCCCCCCC LKENAMTYRGEFKADQYSGLGRLELDDGSSYQGQFAHGKPNGEGQRGDASGNQFTGHFVN HHHCCEEECCCCCCHHHCCCCEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEEEE GQLEGNGTFNSADGDIYVGGFKNNQLHGKGRYENADGDVWLGQFKEGALTGKGELIGADG EEEECCCCCCCCCCCEEEECCCCCEECCCCCCCCCCCCEEEECCCCCCCCCCCCEEECCC SHYIGYFNDWRFSGQGRLNLSDGSFYVGGFDSDSYSGRGTLVLTDGSVLSGTWINGQRVR CCEEEEEECEEECCCCEEEECCCCEEEECCCCCCCCCCEEEEEECCCEEEEEEECCCEEE DADGKLLPDTLELGLLAQGRLLDEALANVPASTPAVELYTLTLGGDGKQSVFLRESDYVA CCCCCCCCHHHHHCEECCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEECCHHHH NMLTSRFGAFGQIRLVNHRDHLGDRPMATRENLRRAALTLAERSGPEDLVFIYLTSHGTA HHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC EHELVLDQPRMELADLPADELAAVLAPLKNRDKIIVISSCYSGGFIPALKDERTLIMTAS CCEEEECCCCHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEC RADRVSFGCSEEANFTYFGDALFAQALNQTDDLEQAFKLAKATVAERELADNFEASEPQI CCCCEECCCCCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE WAPKTVLAHWQLLRKQQARKALQSAALNDGATKSN ECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA