| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yohJ [C]
Identifier: 77461202
GI number: 77461202
Start: 5611883
End: 5612245
Strand: Reverse
Name: yohJ [C]
Synonym: Pfl01_4981
Alternate gene names: 77461202
Gene position: 5612245-5611883 (Counterclockwise)
Preceding gene: 77461206
Following gene: 77461201
Centisome position: 87.17
GC content: 61.71
Gene sequence:
>363_bases ATGTTGCTACGTGGCCTGACGTGGCTGGTGCTGTTTCAATTGCTCGGCACGGCCCTCAATCATTTGCTGTTGCCGGTGCT GCCGGGGCCGATCATCGGCCTTTTGCTGTTGCTGGTATTCCTGATCGTGCGCGGTGAAGTCGGCGAGCCGTTGAACCTTG CGGCCGGCAGTCTGTTGCGTTACCTGCCGTTGCTGCTGGTGCCGCCAGCGGTGGGTGTGATGGTGTATGCCACGGCGATT GCCGCGGATTTCTGGGCCATCGTCGGTGCGCTGGTGGTCTCGCTGATTCTGTCCATGGCCTTTGCCGGCATACTGATGCA ACGGCTGGTCAAGCGCCACGCGCCGCATTCGGAGGAGTCCTGA
Upstream 100 bases:
>100_bases CAGGTCAACCGACCATGCTTTTGGCGAATGCCGATCCATAGCGCAGGCGTGCTTATAATGCCGACGACTTGCGGGTTGGA AAGTAAGACGGAGATGTCGG
Downstream 100 bases:
>100_bases TGCTGTTCGACTGGCAAGGTGCCTGGGCGTCGGTGATTCACCATCCCCTGTTCGGCATCGGCATCACTCTGGGTGCCTAT CAACTGGTGCTGGCTGCGTT
Product: LrgA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MLLRGLTWLVLFQLLGTALNHLLLPVLPGPIIGLLLLLVFLIVRGEVGEPLNLAAGSLLRYLPLLLVPPAVGVMVYATAI AADFWAIVGALVVSLILSMAFAGILMQRLVKRHAPHSEES
Sequences:
>Translated_120_residues MLLRGLTWLVLFQLLGTALNHLLLPVLPGPIIGLLLLLVFLIVRGEVGEPLNLAAGSLLRYLPLLLVPPAVGVMVYATAI AADFWAIVGALVVSLILSMAFAGILMQRLVKRHAPHSEES >Mature_120_residues MLLRGLTWLVLFQLLGTALNHLLLPVLPGPIIGLLLLLVFLIVRGEVGEPLNLAAGSLLRYLPLLLVPPAVGVMVYATAI AADFWAIVGALVVSLILSMAFAGILMQRLVKRHAPHSEES
Specific function: Unknown
COG id: COG1380
COG function: function code R; Putative effector of murein hydrolase LrgA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12866; Mature: 12866
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLRGLTWLVLFQLLGTALNHLLLPVLPGPIIGLLLLLVFLIVRGEVGEPLNLAAGSLLR CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH YLPLLLVPPAVGVMVYATAIAADFWAIVGALVVSLILSMAFAGILMQRLVKRHAPHSEES HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLLRGLTWLVLFQLLGTALNHLLLPVLPGPIIGLLLLLVFLIVRGEVGEPLNLAAGSLLR CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH YLPLLLVPPAVGVMVYATAIAADFWAIVGALVVSLILSMAFAGILMQRLVKRHAPHSEES HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA