Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is yohJ [C]

Identifier: 77461202

GI number: 77461202

Start: 5611883

End: 5612245

Strand: Reverse

Name: yohJ [C]

Synonym: Pfl01_4981

Alternate gene names: 77461202

Gene position: 5612245-5611883 (Counterclockwise)

Preceding gene: 77461206

Following gene: 77461201

Centisome position: 87.17

GC content: 61.71

Gene sequence:

>363_bases
ATGTTGCTACGTGGCCTGACGTGGCTGGTGCTGTTTCAATTGCTCGGCACGGCCCTCAATCATTTGCTGTTGCCGGTGCT
GCCGGGGCCGATCATCGGCCTTTTGCTGTTGCTGGTATTCCTGATCGTGCGCGGTGAAGTCGGCGAGCCGTTGAACCTTG
CGGCCGGCAGTCTGTTGCGTTACCTGCCGTTGCTGCTGGTGCCGCCAGCGGTGGGTGTGATGGTGTATGCCACGGCGATT
GCCGCGGATTTCTGGGCCATCGTCGGTGCGCTGGTGGTCTCGCTGATTCTGTCCATGGCCTTTGCCGGCATACTGATGCA
ACGGCTGGTCAAGCGCCACGCGCCGCATTCGGAGGAGTCCTGA

Upstream 100 bases:

>100_bases
CAGGTCAACCGACCATGCTTTTGGCGAATGCCGATCCATAGCGCAGGCGTGCTTATAATGCCGACGACTTGCGGGTTGGA
AAGTAAGACGGAGATGTCGG

Downstream 100 bases:

>100_bases
TGCTGTTCGACTGGCAAGGTGCCTGGGCGTCGGTGATTCACCATCCCCTGTTCGGCATCGGCATCACTCTGGGTGCCTAT
CAACTGGTGCTGGCTGCGTT

Product: LrgA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MLLRGLTWLVLFQLLGTALNHLLLPVLPGPIIGLLLLLVFLIVRGEVGEPLNLAAGSLLRYLPLLLVPPAVGVMVYATAI
AADFWAIVGALVVSLILSMAFAGILMQRLVKRHAPHSEES

Sequences:

>Translated_120_residues
MLLRGLTWLVLFQLLGTALNHLLLPVLPGPIIGLLLLLVFLIVRGEVGEPLNLAAGSLLRYLPLLLVPPAVGVMVYATAI
AADFWAIVGALVVSLILSMAFAGILMQRLVKRHAPHSEES
>Mature_120_residues
MLLRGLTWLVLFQLLGTALNHLLLPVLPGPIIGLLLLLVFLIVRGEVGEPLNLAAGSLLRYLPLLLVPPAVGVMVYATAI
AADFWAIVGALVVSLILSMAFAGILMQRLVKRHAPHSEES

Specific function: Unknown

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12866; Mature: 12866

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLRGLTWLVLFQLLGTALNHLLLPVLPGPIIGLLLLLVFLIVRGEVGEPLNLAAGSLLR
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
YLPLLLVPPAVGVMVYATAIAADFWAIVGALVVSLILSMAFAGILMQRLVKRHAPHSEES
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLLRGLTWLVLFQLLGTALNHLLLPVLPGPIIGLLLLLVFLIVRGEVGEPLNLAAGSLLR
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
YLPLLLVPPAVGVMVYATAIAADFWAIVGALVVSLILSMAFAGILMQRLVKRHAPHSEES
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA