| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is nadD [H]
Identifier: 77461194
GI number: 77461194
Start: 5601042
End: 5601731
Strand: Reverse
Name: nadD [H]
Synonym: Pfl01_4973
Alternate gene names: 77461194
Gene position: 5601731-5601042 (Counterclockwise)
Preceding gene: 77461195
Following gene: 77461193
Centisome position: 87.0
GC content: 65.07
Gene sequence:
>690_bases TTGTCCGACCTCGACCTGAAAACGCCGAAAACCGGCAAGAAACCTCGTCCCCGGCGCATTGGCGTACTGGGCGGGACGTT CGATCCGGTGCATGTCGGCCATCTACGTGGTGCGCTTGAAGTTGCCGAAGCGCTTGGGCTCGATGAGCTGCGCATGATGC CCAGCGCCCGGCCGCCGCACCGCGATACGCCGCAAGTGTCGGCGCAGGATCGGCTGGCAATGGTTGAATGTGCGGTGGCC GGTGTGCCGCCGCTGGTGGTGGACGCCCGCGAATTGCAGCGGGACAAACCGTCCTGGACCATCGATACCCTGGAGTCGCT GCGTGCCGAAATGGCCGCCGAGACCCAGGTTTTTCTGCTTCTGGGCTGGGACGCGTTTTGCGGCCTGCCCACTTGGCACC GCTGGGAAGAGTTGCTCCAGCATTGCCACATCCTGGTGCTACAGCGCCCGGACGCCGACAGCGAACCGCCGGATGCCTTG CGCAACCTGCTGGCAGCGCGTTCGGTGAGCGACCCGCTGGCCCTGAAGGGGCCGAGCGGACAGATTGCATTCGTCTGGCA GACACCGCTCGCGGTTTCCGCCACCCAGATCCGTCAACTGCTGGCCAGCGGTAAGTCGGTACGTTTCCTGGTGCCCGACG CGGTCCTGGCCTACATCGATGCGCACGGTCTGTACCGTGCGTCGAACTGA
Upstream 100 bases:
>100_bases AAGCTGCACGCCCGTGGCCCGGTGGGCCTCGAAGGGCTGACCTGCGAGAAGTACATCGTGGTCGGTGATGGTCAGTTGCG CGGCCAGGCGACGGTCTGAC
Downstream 100 bases:
>100_bases ACAAGGCGTGCTTCACTGATACGAATCCACGTGTCGCCAAGCCGCCGAATATATGAGCAAAACGAGTTTTATATGACTGA CAAAGACCAAACCAAAGTAA
Product: nicotinic acid mononucleotide adenylyltransferase
Products: NA
Alternate protein names: Deamido-NAD(+) diphosphorylase; Deamido-NAD(+) pyrophosphorylase; Nicotinate mononucleotide adenylyltransferase; NaMN adenylyltransferase [H]
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MSDLDLKTPKTGKKPRPRRIGVLGGTFDPVHVGHLRGALEVAEALGLDELRMMPSARPPHRDTPQVSAQDRLAMVECAVA GVPPLVVDARELQRDKPSWTIDTLESLRAEMAAETQVFLLLGWDAFCGLPTWHRWEELLQHCHILVLQRPDADSEPPDAL RNLLAARSVSDPLALKGPSGQIAFVWQTPLAVSATQIRQLLASGKSVRFLVPDAVLAYIDAHGLYRASN
Sequences:
>Translated_229_residues MSDLDLKTPKTGKKPRPRRIGVLGGTFDPVHVGHLRGALEVAEALGLDELRMMPSARPPHRDTPQVSAQDRLAMVECAVA GVPPLVVDARELQRDKPSWTIDTLESLRAEMAAETQVFLLLGWDAFCGLPTWHRWEELLQHCHILVLQRPDADSEPPDAL RNLLAARSVSDPLALKGPSGQIAFVWQTPLAVSATQIRQLLASGKSVRFLVPDAVLAYIDAHGLYRASN >Mature_228_residues SDLDLKTPKTGKKPRPRRIGVLGGTFDPVHVGHLRGALEVAEALGLDELRMMPSARPPHRDTPQVSAQDRLAMVECAVAG VPPLVVDARELQRDKPSWTIDTLESLRAEMAAETQVFLLLGWDAFCGLPTWHRWEELLQHCHILVLQRPDADSEPPDALR NLLAARSVSDPLALKGPSGQIAFVWQTPLAVSATQIRQLLASGKSVRFLVPDAVLAYIDAHGLYRASN
Specific function: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) [H]
COG id: COG1057
COG function: function code H; Nicotinic acid mononucleotide adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nadD family [H]
Homologues:
Organism=Escherichia coli, GI1786858, Length=209, Percent_Identity=36.3636363636364, Blast_Score=140, Evalue=1e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR005248 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: =2.7.7.18 [H]
Molecular weight: Translated: 25136; Mature: 25005
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLDLKTPKTGKKPRPRRIGVLGGTFDPVHVGHLRGALEVAEALGLDELRMMPSARPPH CCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCC RDTPQVSAQDRLAMVECAVAGVPPLVVDARELQRDKPSWTIDTLESLRAEMAAETQVFLL CCCCCCCHHHHHHHHHHHHCCCCCCEECHHHHHCCCCCEEHHHHHHHHHHHHCCCEEEEE LGWDAFCGLPTWHRWEELLQHCHILVLQRPDADSEPPDALRNLLAARSVSDPLALKGPSG ECCHHHHCCCCHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEECCCC QIAFVWQTPLAVSATQIRQLLASGKSVRFLVPDAVLAYIDAHGLYRASN CEEEEECCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCEEECCC >Mature Secondary Structure SDLDLKTPKTGKKPRPRRIGVLGGTFDPVHVGHLRGALEVAEALGLDELRMMPSARPPH CCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCC RDTPQVSAQDRLAMVECAVAGVPPLVVDARELQRDKPSWTIDTLESLRAEMAAETQVFLL CCCCCCCHHHHHHHHHHHHCCCCCCEECHHHHHCCCCCEEHHHHHHHHHHHHCCCEEEEE LGWDAFCGLPTWHRWEELLQHCHILVLQRPDADSEPPDALRNLLAARSVSDPLALKGPSG ECCHHHHCCCCHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEECCCC QIAFVWQTPLAVSATQIRQLLASGKSVRFLVPDAVLAYIDAHGLYRASN CEEEEECCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA