| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is amn [H]
Identifier: 77461163
GI number: 77461163
Start: 5567448
End: 5568947
Strand: Reverse
Name: amn [H]
Synonym: Pfl01_4942
Alternate gene names: 77461163
Gene position: 5568947-5567448 (Counterclockwise)
Preceding gene: 77461164
Following gene: 77461162
Centisome position: 86.5
GC content: 62.53
Gene sequence:
>1500_bases ATGAAGCTCTGCAAGTCAGAACACAGGAAGCTGATCGTGACCGAAGCGTTTATTGTCGTTCAAACCGCCGAACAGGCCGT GGATCGTCTCGCCGAGCTGCATGAGCGGGCCACCACGGCGCTGAACTCGGCGCTCAAGCGTTATCTCAAGGATCGCGTCG AGCCCGACGCCGAGCAACGTGCCCTGTTCCGTTATCCCGAACTGCGTCTGACCTACCACTGCCAGGGCGAAGTCCCGCAG ACCACCCGCGCCTACGCCAAGGTGCAGTTGCCGGGTACTTACAGCGTGACCGTTACCCATCCGAAGGCGTTTCGCAAATA CCTGCTCGAGCAGCTCACGCCGCTGATGCACGACTTCACCGTGACTGTCGAAGTCGGAGTCAGCGGGCAGAACATTCCGT ACCCGTACGTGGTCGAGCAGGGCGATGAACTGGCCGGCTCCGGTGTCACTGCCGCCGTGCTGGCGCGAGTGTTCCCGAGT ACCGACCTGTCCGCCGCCACCGATGGCATTGCCGACGGGCTCTACGACTGGGAAAACACCGATCCGCTGCCGCTGGCGCT GTTTGACGCCGCGCGCGTCGACTTCTCGCTGCGTCGTCTGGTGCACTACACCGGCAGCGACTGGCGCCATGTGCAGCCGT GGATTCTGTTGACCAACTATCACCGTTATGTCGACCAGTTCATCGTCCATGGCCTGGAACAACTGCGCCGCGACCCGCGT TTCGTGCGCATGGTGTTGCCGGGCAACGTGATCATCGAAAAAGGCATGGATCATGGCGAAGCCTCGGCGATTGCGGCCGG CGTGGTCTGGCACCGCTATCAGATGCCGGCCTATCACCTGATCGCCAGCGATGGCCACGGCGTGACCTTGGTCAATATCG GCGTCGGCCCGTCCAACGCCAAGAACATCACCGACCACCTGGCTGTGCTGCGTCCGCATTGCTGGCTGATGATCGGTCAC TGCGGCGGCCTGCGTCAGTCACAGACCATCGGCGACTACGTGCTGGCTCACGCTTACATGCGTCGCGACGGGATTCTCGA CCGGGTAGTGCCGCCGAACATTCCGATTCCGGCCCTGGCCGAAGTGCAACTGGCGTTGCAGCAAGCGGCGGCCAACATCA CCGGCGAAAAAGGCGAAGAGCTGAAGAAGCGCCTGCGCACCGGCACCGTGCTGACCTACGACGACCGCAACTGGGAATTG CGCTGGGCCCAGGAGCGACCGCTGATCAACCTGTCCCGCGCCGTGGCCGTGGACATGGAAAGCGGCACCATCGCCGCCCA GGGTTATCGCCTGCGGGTGCCGTACGGCACGTTGTTGTGTGTGTCGGACAAGCCGCTGCACAGCGAAATCAAGCTGCCGG GTTCGGCCAACGCGTTCTACGAACGTGCGGTCAGTCAGCATTTGAAGATCGGTATCGAAGCAGTGGATCTGCTGCGCACC GAACTCAATTCGCTGCACTCGCGCAAACTGCGCAGCTTCGACGAGCCGCCGTTCCGCTAA
Upstream 100 bases:
>100_bases TCGAAGCCATCGTCGCTCGCTCCACACCACAAGGTTTCTGAAGGGGGATCGCGACAAAGCCATTACGCCACTGTTTCCGT GACGCCACGATGCAGGCAAG
Downstream 100 bases:
>100_bases CGGTTTGTCGTGGTCATTTGGCGGTCGGGGCACTAGCATTGTCAGCCCTGATCGCTAAATGTCTTCTCTCTTATGTCCCG TCCCCAACGTCCGCCTTCCC
Product: AMP nucleosidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MKLCKSEHRKLIVTEAFIVVQTAEQAVDRLAELHERATTALNSALKRYLKDRVEPDAEQRALFRYPELRLTYHCQGEVPQ TTRAYAKVQLPGTYSVTVTHPKAFRKYLLEQLTPLMHDFTVTVEVGVSGQNIPYPYVVEQGDELAGSGVTAAVLARVFPS TDLSAATDGIADGLYDWENTDPLPLALFDAARVDFSLRRLVHYTGSDWRHVQPWILLTNYHRYVDQFIVHGLEQLRRDPR FVRMVLPGNVIIEKGMDHGEASAIAAGVVWHRYQMPAYHLIASDGHGVTLVNIGVGPSNAKNITDHLAVLRPHCWLMIGH CGGLRQSQTIGDYVLAHAYMRRDGILDRVVPPNIPIPALAEVQLALQQAAANITGEKGEELKKRLRTGTVLTYDDRNWEL RWAQERPLINLSRAVAVDMESGTIAAQGYRLRVPYGTLLCVSDKPLHSEIKLPGSANAFYERAVSQHLKIGIEAVDLLRT ELNSLHSRKLRSFDEPPFR
Sequences:
>Translated_499_residues MKLCKSEHRKLIVTEAFIVVQTAEQAVDRLAELHERATTALNSALKRYLKDRVEPDAEQRALFRYPELRLTYHCQGEVPQ TTRAYAKVQLPGTYSVTVTHPKAFRKYLLEQLTPLMHDFTVTVEVGVSGQNIPYPYVVEQGDELAGSGVTAAVLARVFPS TDLSAATDGIADGLYDWENTDPLPLALFDAARVDFSLRRLVHYTGSDWRHVQPWILLTNYHRYVDQFIVHGLEQLRRDPR FVRMVLPGNVIIEKGMDHGEASAIAAGVVWHRYQMPAYHLIASDGHGVTLVNIGVGPSNAKNITDHLAVLRPHCWLMIGH CGGLRQSQTIGDYVLAHAYMRRDGILDRVVPPNIPIPALAEVQLALQQAAANITGEKGEELKKRLRTGTVLTYDDRNWEL RWAQERPLINLSRAVAVDMESGTIAAQGYRLRVPYGTLLCVSDKPLHSEIKLPGSANAFYERAVSQHLKIGIEAVDLLRT ELNSLHSRKLRSFDEPPFR >Mature_499_residues MKLCKSEHRKLIVTEAFIVVQTAEQAVDRLAELHERATTALNSALKRYLKDRVEPDAEQRALFRYPELRLTYHCQGEVPQ TTRAYAKVQLPGTYSVTVTHPKAFRKYLLEQLTPLMHDFTVTVEVGVSGQNIPYPYVVEQGDELAGSGVTAAVLARVFPS TDLSAATDGIADGLYDWENTDPLPLALFDAARVDFSLRRLVHYTGSDWRHVQPWILLTNYHRYVDQFIVHGLEQLRRDPR FVRMVLPGNVIIEKGMDHGEASAIAAGVVWHRYQMPAYHLIASDGHGVTLVNIGVGPSNAKNITDHLAVLRPHCWLMIGH CGGLRQSQTIGDYVLAHAYMRRDGILDRVVPPNIPIPALAEVQLALQQAAANITGEKGEELKKRLRTGTVLTYDDRNWEL RWAQERPLINLSRAVAVDMESGTIAAQGYRLRVPYGTLLCVSDKPLHSEIKLPGSANAFYERAVSQHLKIGIEAVDLLRT ELNSLHSRKLRSFDEPPFR
Specific function: Involved in regulation of AMP concentrations [H]
COG id: COG0775
COG function: function code F; Nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788293, Length=481, Percent_Identity=55.3014553014553, Blast_Score=517, Evalue=1e-148,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011271 - InterPro: IPR018953 - InterPro: IPR018017 - InterPro: IPR000845 [H]
Pfam domain/function: PF10423 AMNp_N; PF01048 PNP_UDP_1 [H]
EC number: =3.2.2.4 [H]
Molecular weight: Translated: 56022; Mature: 56022
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLCKSEHRKLIVTEAFIVVQTAEQAVDRLAELHERATTALNSALKRYLKDRVEPDAEQR CCCCHHHCCEEEEEEHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ALFRYPELRLTYHCQGEVPQTTRAYAKVQLPGTYSVTVTHPKAFRKYLLEQLTPLMHDFT HHHCCCCEEEEEEECCCCCCCCCCEEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHCEE VTVEVGVSGQNIPYPYVVEQGDELAGSGVTAAVLARVFPSTDLSAATDGIADGLYDWENT EEEEECCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCC DPLPLALFDAARVDFSLRRLVHYTGSDWRHVQPWILLTNYHRYVDQFIVHGLEQLRRDPR CCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCC FVRMVLPGNVIIEKGMDHGEASAIAAGVVWHRYQMPAYHLIASDGHGVTLVNIGVGPSNA EEEEEECCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCC KNITDHLAVLRPHCWLMIGHCGGLRQSQTIGDYVLAHAYMRRDGILDRVVPPNIPIPALA CHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHH EVQLALQQAAANITGEKGEELKKRLRTGTVLTYDDRNWELRWAQERPLINLSRAVAVDME HHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCCEEEEECCCCCEEECCEEEEEEC SGTIAAQGYRLRVPYGTLLCVSDKPLHSEIKLPGSANAFYERAVSQHLKIGIEAVDLLRT CCEEEECCEEEECCCCEEEEECCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH ELNSLHSRKLRSFDEPPFR HHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKLCKSEHRKLIVTEAFIVVQTAEQAVDRLAELHERATTALNSALKRYLKDRVEPDAEQR CCCCHHHCCEEEEEEHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ALFRYPELRLTYHCQGEVPQTTRAYAKVQLPGTYSVTVTHPKAFRKYLLEQLTPLMHDFT HHHCCCCEEEEEEECCCCCCCCCCEEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHCEE VTVEVGVSGQNIPYPYVVEQGDELAGSGVTAAVLARVFPSTDLSAATDGIADGLYDWENT EEEEECCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCC DPLPLALFDAARVDFSLRRLVHYTGSDWRHVQPWILLTNYHRYVDQFIVHGLEQLRRDPR CCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCC FVRMVLPGNVIIEKGMDHGEASAIAAGVVWHRYQMPAYHLIASDGHGVTLVNIGVGPSNA EEEEEECCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCC KNITDHLAVLRPHCWLMIGHCGGLRQSQTIGDYVLAHAYMRRDGILDRVVPPNIPIPALA CHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHH EVQLALQQAAANITGEKGEELKKRLRTGTVLTYDDRNWELRWAQERPLINLSRAVAVDME HHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCCEEEEECCCCCEEECCEEEEEEC SGTIAAQGYRLRVPYGTLLCVSDKPLHSEIKLPGSANAFYERAVSQHLKIGIEAVDLLRT CCEEEECCEEEECCCCEEEEECCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH ELNSLHSRKLRSFDEPPFR HHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]