| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is rlmG
Identifier: 77461111
GI number: 77461111
Start: 5514075
End: 5515199
Strand: Direct
Name: rlmG
Synonym: Pfl01_4890
Alternate gene names: 77461111
Gene position: 5514075-5515199 (Clockwise)
Preceding gene: 77461110
Following gene: 77461115
Centisome position: 85.64
GC content: 62.93
Gene sequence:
>1125_bases ATGCCTTTGCTCGATACGCCCTTCGCCCAGCTTGATCTGATCCGCCAGCCCGAACAGCAGAACGAACCGCTGCAAGCCTT CGACGCAGCCGACGAATACCTGCTCAATCATCTGGCCGAACAGAATCTGCCGATCGAGACACGGGTTCTGGTGCTCAACG ACAGTTTCGGCGCGCTGGCCATCAGCCTGTCAGGCAACGTGCAGGTCAGCACCAGCGGCGATTCGTTCCTGGCGTTTCAA GGCCTTGAAAAAAACCTGCTGCGCAATGGTCAGGCATTCGATGCGCTGCGCGGCATTCCCGCCAGCGAGCCGTTGGTCGG GCCATTTGACCGGGTGCTGATCCGCGTTCCGAAAACCCTGGCACTGCTGGAAGAACAACTGATTCGCCTGCAAGGCCAAT TGGCGCCCGGCGCGCAAGTGGTCGCCGCAGCCATGGTCAAACATCTGCCCCGCGCCGCCGGTGATCTGCTGGAACGCTAT ATCGGCCCGGTTCAGGCTTCGCTGGCGGTGAAGAAGGCACGCTTGCTGATCGCCACGCCCGAGGCGAAGGCACCCGCTGT CTCGCCCTACCCGACCCGTTATCGCCTCGACGAGCCGGCCATCGAACTGCTCAACCATGCCAACGTGTTCTGCCGTGAAG GGCTGGACATCGGCACCCGTGCCTTCCTTCCGCACCTGCCGAAAAACCTCGGCGCGGCAGGGGTCGCCGACCTAGGCTGC GGTAACGGCGTACTGGCCATCGCCAGCGCCCTGCAAAACCCAGATGCGCATTACACGCTGGTGGACGAATCGTTCATGGC CGTGCAGTCGGCGGCCGAAAACTGGCGCGCGGCGCTGGGTGAACGTGAAGCGATCGTGCGCGCAGGCGACGGCCTTGCCG GACAGGAAGCGCAATCGCTGGATGTGGTGCTGTGCAACCCGCCGTTTCACCAGCAACAGGTGGTCGGCGACTTCCTTGCC TGGCGCATGTTCCAGCAGGCCCGCGAAGCACTGGTCGTCGGTGGTGCGCTGTACATCGTCGGCAACCGTCACCTGGGTTA TCACAGCAAACTGGCGCGACTGTTCCGGGGTGTCGAGCAGGTCGCGGCCACGCCGAAATTCGTGATCCTCAAGGCACGCA AATAA
Upstream 100 bases:
>100_bases GTGATGTCGTGAGCGTTCACGTCGCAGTGCACTCGGTTGGTTCCGCCGCACTAAACCCTGGGCCGCGGGACACCCGTCGA TTACCCAGAGTCCCCGCCCC
Downstream 100 bases:
>100_bases TCCGGGCAAAAAAAACCCTCCGGTCGGAGGGTTAAAAATCCGTGCCGCAAGGCAGCGGGATGGGAAGTCTTAGTGCGTGG TCAGGCCTGCTGCATTCATG
Product: 16S rRNA m(2)G 1207 methyltransferase
Products: NA
Alternate protein names: 23S rRNA m2G1835 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rlmG
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MPLLDTPFAQLDLIRQPEQQNEPLQAFDAADEYLLNHLAEQNLPIETRVLVLNDSFGALAISLSGNVQVSTSGDSFLAFQ GLEKNLLRNGQAFDALRGIPASEPLVGPFDRVLIRVPKTLALLEEQLIRLQGQLAPGAQVVAAAMVKHLPRAAGDLLERY IGPVQASLAVKKARLLIATPEAKAPAVSPYPTRYRLDEPAIELLNHANVFCREGLDIGTRAFLPHLPKNLGAAGVADLGC GNGVLAIASALQNPDAHYTLVDESFMAVQSAAENWRAALGEREAIVRAGDGLAGQEAQSLDVVLCNPPFHQQQVVGDFLA WRMFQQAREALVVGGALYIVGNRHLGYHSKLARLFRGVEQVAATPKFVILKARK
Sequences:
>Translated_374_residues MPLLDTPFAQLDLIRQPEQQNEPLQAFDAADEYLLNHLAEQNLPIETRVLVLNDSFGALAISLSGNVQVSTSGDSFLAFQ GLEKNLLRNGQAFDALRGIPASEPLVGPFDRVLIRVPKTLALLEEQLIRLQGQLAPGAQVVAAAMVKHLPRAAGDLLERY IGPVQASLAVKKARLLIATPEAKAPAVSPYPTRYRLDEPAIELLNHANVFCREGLDIGTRAFLPHLPKNLGAAGVADLGC GNGVLAIASALQNPDAHYTLVDESFMAVQSAAENWRAALGEREAIVRAGDGLAGQEAQSLDVVLCNPPFHQQQVVGDFLA WRMFQQAREALVVGGALYIVGNRHLGYHSKLARLFRGVEQVAATPKFVILKARK >Mature_373_residues PLLDTPFAQLDLIRQPEQQNEPLQAFDAADEYLLNHLAEQNLPIETRVLVLNDSFGALAISLSGNVQVSTSGDSFLAFQG LEKNLLRNGQAFDALRGIPASEPLVGPFDRVLIRVPKTLALLEEQLIRLQGQLAPGAQVVAAAMVKHLPRAAGDLLERYI GPVQASLAVKKARLLIATPEAKAPAVSPYPTRYRLDEPAIELLNHANVFCREGLDIGTRAFLPHLPKNLGAAGVADLGCG NGVLAIASALQNPDAHYTLVDESFMAVQSAAENWRAALGEREAIVRAGDGLAGQEAQSLDVVLCNPPFHQQQVVGDFLAW RMFQQAREALVVGGALYIVGNRHLGYHSKLARLFRGVEQVAATPKFVILKARK
Specific function: Specifically methylates the guanosine in position 1835 (m2G1835) of 23S rRNA
COG id: COG2813
COG function: function code J; 16S RNA G1207 methylase RsmC
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. RlmG family
Homologues:
Organism=Escherichia coli, GI87082206, Length=379, Percent_Identity=40.8970976253298, Blast_Score=257, Evalue=9e-70, Organism=Escherichia coli, GI1790830, Length=364, Percent_Identity=27.1978021978022, Blast_Score=78, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RLMG_PSEPF (Q3K6H7)
Other databases:
- EMBL: CP000094 - RefSeq: YP_350618.1 - ProteinModelPortal: Q3K6H7 - STRING: Q3K6H7 - GeneID: 3714247 - GenomeReviews: CP000094_GR - KEGG: pfo:Pfl01_4890 - eggNOG: COG2813 - HOGENOM: HBG321931 - OMA: NRHLGYH - ProtClustDB: CLSK868782 - BioCyc: PFLU205922:PFL_4890-MONOMER - GO: GO:0005737 - HAMAP: MF_01859 - InterPro: IPR002052 - InterPro: IPR017237 - InterPro: IPR007848 - PIRSF: PIRSF037565
Pfam domain/function: PF05175 MTS
EC number: =2.1.1.174
Molecular weight: Translated: 40426; Mature: 40295
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLLDTPFAQLDLIRQPEQQNEPLQAFDAADEYLLNHLAEQNLPIETRVLVLNDSFGALA CCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEE ISLSGNVQVSTSGDSFLAFQGLEKNLLRNGQAFDALRGIPASEPLVGPFDRVLIRVPKTL EEECCCEEEEECCCCEEEECCHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCHHH ALLEEQLIRLQGQLAPGAQVVAAAMVKHLPRAAGDLLERYIGPVQASLAVKKARLLIATP HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCEEEEECC EAKAPAVSPYPTRYRLDEPAIELLNHANVFCREGLDIGTRAFLPHLPKNLGAAGVADLGC CCCCCCCCCCCCCEECCHHHHHHHHHCCHHHHCCCCCCHHHHHHHCCHHCCCCCCCCCCC GNGVLAIASALQNPDAHYTLVDESFMAVQSAAENWRAALGEREAIVRAGDGLAGQEAQSL CCCHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCCC DVVLCNPPFHQQQVVGDFLAWRMFQQAREALVVGGALYIVGNRHLGYHSKLARLFRGVEQ EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHH VAATPKFVILKARK HHCCCCEEEEEECC >Mature Secondary Structure PLLDTPFAQLDLIRQPEQQNEPLQAFDAADEYLLNHLAEQNLPIETRVLVLNDSFGALA CCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEE ISLSGNVQVSTSGDSFLAFQGLEKNLLRNGQAFDALRGIPASEPLVGPFDRVLIRVPKTL EEECCCEEEEECCCCEEEECCHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCHHH ALLEEQLIRLQGQLAPGAQVVAAAMVKHLPRAAGDLLERYIGPVQASLAVKKARLLIATP HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCEEEEECC EAKAPAVSPYPTRYRLDEPAIELLNHANVFCREGLDIGTRAFLPHLPKNLGAAGVADLGC CCCCCCCCCCCCCEECCHHHHHHHHHCCHHHHCCCCCCHHHHHHHCCHHCCCCCCCCCCC GNGVLAIASALQNPDAHYTLVDESFMAVQSAAENWRAALGEREAIVRAGDGLAGQEAQSL CCCHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCCC DVVLCNPPFHQQQVVGDFLAWRMFQQAREALVVGGALYIVGNRHLGYHSKLARLFRGVEQ EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHH VAATPKFVILKARK HHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA