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The map label for this gene is ycbZ [H]

Identifier: 77461090

GI number: 77461090

Start: 5486394

End: 5488832

Strand: Reverse

Name: ycbZ [H]

Synonym: Pfl01_4869

Alternate gene names: 77461090

Gene position: 5488832-5486394 (Counterclockwise)

Preceding gene: 77461095

Following gene: 77461089

Centisome position: 85.25

GC content: 62.24

Gene sequence:

>2439_bases
ATGCCTGATCCTGTTGCTGCCAGCTTGCGTCTAGCGCCCGAAGCGCTGACCCGTCCGTTTTCCGCTGAACAGTTCAGCTT
CACTACCACCAATGATCTGGAGCCCTTTCGCGGTGTGCTCGGCCAGGAACGTGCGGTCGAAGCCTTGCAGTTCGGTGTGG
CCATGCCACGCCCCGGTTACAACGTGTTCGTCATGGGCGAGCCCGGCACCGGCCGGTTCTCGTTCGTCAAACGCTACCTG
AAGGCTGAAGGCAAACGCCTGCAGACCCCGGCGGACTGGGTCTACGTCAACAATTTCGATGAGCCGCGCGAGCCCCGTGC
CCTGGAACTGCCATCGGGCACTGCCGGTGCTTTTATCGGCGATATCAACGGCCTGATCGACAACCTGCTGGCGACCTTTC
CTGCGGTGTTCGAACACCCGTCCTACCAGCAGAAAAAGAGCGCCATCGACCGCGCCTTCAACCAGCGCTATGACAAGGCA
CTGGATGTCATCGAACGTCTGGCTTTGGAAAAAGACGTCGCCCTGTATCGCGACAGCAGCAACATTGCCTTCACCCCGAT
GCTCGAAGGCAAGGCGCTGGACGAAGCTGAATTCGCTCAATTGCCGGAAGCCGAGCGCGAACGCTTTCACGACGATATTT
CCGCTCTCGAAGAACGCCTGAACGAAGAACTCGCCAGCCTGCCGCAATGGAAGCGTGAGTCGAGCAACCAGTTGCGTCAG
CTCAACGAAGAAACCATCACCCTGGCGTTGCAGCCCTTGCTCGCACCGCTGTCGGAAAAGTACGCGGAAAACGCGGCCGT
CTGCGGCTATCTGCAAGCGATGCAGGTCTATCTGCTTAAAACCGTGGTCGAGCAACTGGTCGATGACAGCAAGACCGACG
CCGTCGCGCGCAAGCTGCTGGAAGAGCAATACGCCCCCAGCCTGGTGGTCGGCCATCCGGCCAGCGGCGGTGCGCCGGTG
GTGTTCGAGCCGCATCCGACCTACGAAAACCTGTTCGGCCGTATCGAGTACACCACCGATCAAGGCGCGCTCTACACCAC
CTATCGCCAGCTGCGTCCGGGTGCGTTGCACCGTGCAAACGGTGGTTTCCTGATCCTTGAAGCAGAAAAAATGCTCGGCG
AGCCGTTCGTGTGGGATGCGCTCAAGCGCGCCCTGCAATCGCGCAAGCTGAAGATGGAGTCGCCGCTGGGCGAGATGGGC
CGTTTCGCCACCATGACGCTCAACCCGCAGCACATTCCGCTGCAGGTCAAAGTGATCATCATCGGTGCCCGTCAGCTGTA
TTACACGCTGCAGGACCTCGATCCGGACTTCCAGGAGATGTTCCGCGTTCTGGTGGACTTCGACGAAGACATCCCGATGG
TCGACGAAAGCCTGGAGCAGTTCGCCCAGTTGCTGAAAACCCGCACTTCGGAAGAGGGCATGGCGCCGCTGACCGCCGAC
GCGGTGGCGCGCCTGGCGACTTACAGTGCGCGTCTGGCCGAACACCAGGGGCGTTTGTCGGCGCGGATCGGCGATCTGTT
TCAGTTGGTCAGCGAGGCGGATTTCATCCGGCATCTGGCCAACGATGAGATGACCGACGCCGGCCACATCGAGCGTGCGC
TCAAGGCCAAGGCCACTCGCACCGGTCGGGTGTCGGCGCGGATTCTCGACGACATGCTGGCGGGGATCATCCTGATCGAT
ACCGATGGGGCGGCGGTCGGCAAGTGCAACGGGCTGACGGTGCTCGAAGTCGGTGACTCGGCGTTCGGTGTGCCGGCGCG
GATTTCCGCCACGGTGTACCCGGGCGGCAGCGGCATCGTCGACATCGAACGTGAGGTCAACCTCGGCCAGCCGATCCACT
CCAAGGGCGTGATGATTCTTACCGGGTATCTGGGCAGCCGTTACGCCCAGGAATTCCCGCTGGCGATTTCCGCGAGCATC
GCGCTGGAGCAATCCTACGGCTACGTCGATGGCGACAGTGCGTCGCTGGGCGAGGCGTGCACGCTGATTTCGGCGTTGTC
GAAAACCCCGCTCAAGCAATGCTTCGCGATCACCGGCTCGATCAACCAGTTCGGTGAAGTGCAGGCGGTGGGCGGGGTCA
ACGAGAAGATCGAAGGCTTCTTCCGTCTCTGCGAAGCGCGCGGGCTGACGGGCGAGCAGGGCGCGATCATTCCGCAGGCC
AACGTCGCCACCTTGATGCTCGATGAGAAGGTGCTGGCAGCGGTGCGTGCCGGGCAGTTCCACGTTTACGCGGTGCGTCA
GGCCGACGAAGCGTTGAGCCTGCTGGTGGGCGAGCCGGCCGGTGAGCCGAACGAACAGGGCGAATTTCCGGAAGGCAGCG
TCAACGCGCGGGTGGTGGAGCGTCTGCGGGTGATTGCCGAGATGATCAGCGAAGAGGATCTGAAGGAGGCCGAGAAGGAA
CTGGCGCAGGAGGCGCTGGCGGAGGCCAAACCGGCCTGA

Upstream 100 bases:

>100_bases
GCCGGTTGTCTATGCTTTGTCGTGTGGCGCGCCTTGCCAGTGGGGCTCGGGCAGCGCCAGAATGCCGCTATCTGCCCCGC
CTGATTGTTAAGGAAGCCCG

Downstream 100 bases:

>100_bases
GTCAGCGGCAGTCAAAAAAACGGGAGTCTTGGCTCCCGTTTTTGTTTTGTCGCGAACGTCGGCAAAAGTGCCATCACTCT
GGCGTCAATATTCACACAAT

Product: ATP-dependent protease

Products: NA

Alternate protein names: ATP-dependent protease La homolog [H]

Number of amino acids: Translated: 812; Mature: 811

Protein sequence:

>812_residues
MPDPVAASLRLAPEALTRPFSAEQFSFTTTNDLEPFRGVLGQERAVEALQFGVAMPRPGYNVFVMGEPGTGRFSFVKRYL
KAEGKRLQTPADWVYVNNFDEPREPRALELPSGTAGAFIGDINGLIDNLLATFPAVFEHPSYQQKKSAIDRAFNQRYDKA
LDVIERLALEKDVALYRDSSNIAFTPMLEGKALDEAEFAQLPEAERERFHDDISALEERLNEELASLPQWKRESSNQLRQ
LNEETITLALQPLLAPLSEKYAENAAVCGYLQAMQVYLLKTVVEQLVDDSKTDAVARKLLEEQYAPSLVVGHPASGGAPV
VFEPHPTYENLFGRIEYTTDQGALYTTYRQLRPGALHRANGGFLILEAEKMLGEPFVWDALKRALQSRKLKMESPLGEMG
RFATMTLNPQHIPLQVKVIIIGARQLYYTLQDLDPDFQEMFRVLVDFDEDIPMVDESLEQFAQLLKTRTSEEGMAPLTAD
AVARLATYSARLAEHQGRLSARIGDLFQLVSEADFIRHLANDEMTDAGHIERALKAKATRTGRVSARILDDMLAGIILID
TDGAAVGKCNGLTVLEVGDSAFGVPARISATVYPGGSGIVDIEREVNLGQPIHSKGVMILTGYLGSRYAQEFPLAISASI
ALEQSYGYVDGDSASLGEACTLISALSKTPLKQCFAITGSINQFGEVQAVGGVNEKIEGFFRLCEARGLTGEQGAIIPQA
NVATLMLDEKVLAAVRAGQFHVYAVRQADEALSLLVGEPAGEPNEQGEFPEGSVNARVVERLRVIAEMISEEDLKEAEKE
LAQEALAEAKPA

Sequences:

>Translated_812_residues
MPDPVAASLRLAPEALTRPFSAEQFSFTTTNDLEPFRGVLGQERAVEALQFGVAMPRPGYNVFVMGEPGTGRFSFVKRYL
KAEGKRLQTPADWVYVNNFDEPREPRALELPSGTAGAFIGDINGLIDNLLATFPAVFEHPSYQQKKSAIDRAFNQRYDKA
LDVIERLALEKDVALYRDSSNIAFTPMLEGKALDEAEFAQLPEAERERFHDDISALEERLNEELASLPQWKRESSNQLRQ
LNEETITLALQPLLAPLSEKYAENAAVCGYLQAMQVYLLKTVVEQLVDDSKTDAVARKLLEEQYAPSLVVGHPASGGAPV
VFEPHPTYENLFGRIEYTTDQGALYTTYRQLRPGALHRANGGFLILEAEKMLGEPFVWDALKRALQSRKLKMESPLGEMG
RFATMTLNPQHIPLQVKVIIIGARQLYYTLQDLDPDFQEMFRVLVDFDEDIPMVDESLEQFAQLLKTRTSEEGMAPLTAD
AVARLATYSARLAEHQGRLSARIGDLFQLVSEADFIRHLANDEMTDAGHIERALKAKATRTGRVSARILDDMLAGIILID
TDGAAVGKCNGLTVLEVGDSAFGVPARISATVYPGGSGIVDIEREVNLGQPIHSKGVMILTGYLGSRYAQEFPLAISASI
ALEQSYGYVDGDSASLGEACTLISALSKTPLKQCFAITGSINQFGEVQAVGGVNEKIEGFFRLCEARGLTGEQGAIIPQA
NVATLMLDEKVLAAVRAGQFHVYAVRQADEALSLLVGEPAGEPNEQGEFPEGSVNARVVERLRVIAEMISEEDLKEAEKE
LAQEALAEAKPA
>Mature_811_residues
PDPVAASLRLAPEALTRPFSAEQFSFTTTNDLEPFRGVLGQERAVEALQFGVAMPRPGYNVFVMGEPGTGRFSFVKRYLK
AEGKRLQTPADWVYVNNFDEPREPRALELPSGTAGAFIGDINGLIDNLLATFPAVFEHPSYQQKKSAIDRAFNQRYDKAL
DVIERLALEKDVALYRDSSNIAFTPMLEGKALDEAEFAQLPEAERERFHDDISALEERLNEELASLPQWKRESSNQLRQL
NEETITLALQPLLAPLSEKYAENAAVCGYLQAMQVYLLKTVVEQLVDDSKTDAVARKLLEEQYAPSLVVGHPASGGAPVV
FEPHPTYENLFGRIEYTTDQGALYTTYRQLRPGALHRANGGFLILEAEKMLGEPFVWDALKRALQSRKLKMESPLGEMGR
FATMTLNPQHIPLQVKVIIIGARQLYYTLQDLDPDFQEMFRVLVDFDEDIPMVDESLEQFAQLLKTRTSEEGMAPLTADA
VARLATYSARLAEHQGRLSARIGDLFQLVSEADFIRHLANDEMTDAGHIERALKAKATRTGRVSARILDDMLAGIILIDT
DGAAVGKCNGLTVLEVGDSAFGVPARISATVYPGGSGIVDIEREVNLGQPIHSKGVMILTGYLGSRYAQEFPLAISASIA
LEQSYGYVDGDSASLGEACTLISALSKTPLKQCFAITGSINQFGEVQAVGGVNEKIEGFFRLCEARGLTGEQGAIIPQAN
VATLMLDEKVLAAVRAGQFHVYAVRQADEALSLLVGEPAGEPNEQGEFPEGSVNARVVERLRVIAEMISEEDLKEAEKEL
AQEALAEAKPA

Specific function: Unknown

COG id: COG1067

COG function: function code O; Predicted ATP-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S16 family [H]

Homologues:

Organism=Escherichia coli, GI1787188, Length=410, Percent_Identity=36.3414634146341, Blast_Score=256, Evalue=4e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008269
- InterPro:   IPR001984
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 89119; Mature: 88988

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDPVAASLRLAPEALTRPFSAEQFSFTTTNDLEPFRGVLGQERAVEALQFGVAMPRPGY
CCCCCCHHHEECHHHHCCCCCCCCEECCCCCCCCHHHHHHCHHHHHHHHHHCCCCCCCCC
NVFVMGEPGTGRFSFVKRYLKAEGKRLQTPADWVYVNNFDEPREPRALELPSGTAGAFIG
EEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCEEECCCCCCCHHHH
DINGLIDNLLATFPAVFEHPSYQQKKSAIDRAFNQRYDKALDVIERLALEKDVALYRDSS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
NIAFTPMLEGKALDEAEFAQLPEAERERFHDDISALEERLNEELASLPQWKRESSNQLRQ
CEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LNEETITLALQPLLAPLSEKYAENAAVCGYLQAMQVYLLKTVVEQLVDDSKTDAVARKLL
HCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
EEQYAPSLVVGHPASGGAPVVFEPHPTYENLFGRIEYTTDQGALYTTYRQLRPGALHRAN
HHHCCCCEEEECCCCCCCCEEECCCCCHHHHCCEEEEECCCCCHHHHHHHHCCCCCEECC
GGFLILEAEKMLGEPFVWDALKRALQSRKLKMESPLGEMGRFATMTLNPQHIPLQVKVII
CCEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEEECCCCCCEEEEEEE
IGARQLYYTLQDLDPDFQEMFRVLVDFDEDIPMVDESLEQFAQLLKTRTSEEGMAPLTAD
EECHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHH
AVARLATYSARLAEHQGRLSARIGDLFQLVSEADFIRHLANDEMTDAGHIERALKAKATR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
TGRVSARILDDMLAGIILIDTDGAAVGKCNGLTVLEVGDSAFGVPARISATVYPGGSGIV
CCCHHHHHHHHHHCCEEEEECCCCCEECCCCEEEEEECCCCCCCCCEEEEEEECCCCCEE
DIEREVNLGQPIHSKGVMILTGYLGSRYAQEFPLAISASIALEQSYGYVDGDSASLGEAC
EEECCCCCCCCCCCCCEEEEEECHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCHHHHH
TLISALSKTPLKQCFAITGSINQFGEVQAVGGVNEKIEGFFRLCEARGLTGEQGAIIPQA
HHHHHHHCCHHHHHHHHHCCCHHCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
NVATLMLDEKVLAAVRAGQFHVYAVRQADEALSLLVGEPAGEPNEQGEFPEGSVNARVVE
CCEEEEHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
RLRVIAEMISEEDLKEAEKELAQEALAEAKPA
HHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PDPVAASLRLAPEALTRPFSAEQFSFTTTNDLEPFRGVLGQERAVEALQFGVAMPRPGY
CCCCCHHHEECHHHHCCCCCCCCEECCCCCCCCHHHHHHCHHHHHHHHHHCCCCCCCCC
NVFVMGEPGTGRFSFVKRYLKAEGKRLQTPADWVYVNNFDEPREPRALELPSGTAGAFIG
EEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCEEECCCCCCCHHHH
DINGLIDNLLATFPAVFEHPSYQQKKSAIDRAFNQRYDKALDVIERLALEKDVALYRDSS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
NIAFTPMLEGKALDEAEFAQLPEAERERFHDDISALEERLNEELASLPQWKRESSNQLRQ
CEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LNEETITLALQPLLAPLSEKYAENAAVCGYLQAMQVYLLKTVVEQLVDDSKTDAVARKLL
HCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
EEQYAPSLVVGHPASGGAPVVFEPHPTYENLFGRIEYTTDQGALYTTYRQLRPGALHRAN
HHHCCCCEEEECCCCCCCCEEECCCCCHHHHCCEEEEECCCCCHHHHHHHHCCCCCEECC
GGFLILEAEKMLGEPFVWDALKRALQSRKLKMESPLGEMGRFATMTLNPQHIPLQVKVII
CCEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEEECCCCCCEEEEEEE
IGARQLYYTLQDLDPDFQEMFRVLVDFDEDIPMVDESLEQFAQLLKTRTSEEGMAPLTAD
EECHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHH
AVARLATYSARLAEHQGRLSARIGDLFQLVSEADFIRHLANDEMTDAGHIERALKAKATR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
TGRVSARILDDMLAGIILIDTDGAAVGKCNGLTVLEVGDSAFGVPARISATVYPGGSGIV
CCCHHHHHHHHHHCCEEEEECCCCCEECCCCEEEEEECCCCCCCCCEEEEEEECCCCCEE
DIEREVNLGQPIHSKGVMILTGYLGSRYAQEFPLAISASIALEQSYGYVDGDSASLGEAC
EEECCCCCCCCCCCCCEEEEEECHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCHHHHH
TLISALSKTPLKQCFAITGSINQFGEVQAVGGVNEKIEGFFRLCEARGLTGEQGAIIPQA
HHHHHHHCCHHHHHHHHHCCCHHCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
NVATLMLDEKVLAAVRAGQFHVYAVRQADEALSLLVGEPAGEPNEQGEFPEGSVNARVVE
CCEEEEHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
RLRVIAEMISEEDLKEAEKELAQEALAEAKPA
HHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]