Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is phnA [H]

Identifier: 77461083

GI number: 77461083

Start: 5481279

End: 5481620

Strand: Direct

Name: phnA [H]

Synonym: Pfl01_4862

Alternate gene names: 77461083

Gene position: 5481279-5481620 (Clockwise)

Preceding gene: 77461082

Following gene: 77461084

Centisome position: 85.13

GC content: 57.6

Gene sequence:

>342_bases
GTGAGCACGTTGCCACCCTGCCCGAAATGCAATTCCGAATACACCTACGAAGACGGCACCCAACTGGTGTGCCCGGAGTG
CGCCCACGAGTGGTCTGCCGGCGGTGAAGCCGAAGTGACGTCCGATGATGCCGTGAAGAAAGATTCGGTCGGTAACGTCC
TGCAAGACGGCGACACCATCACCGTGATCAAGGACCTGAAGGTCAAAGGCACCTCGCTGGTGGTCAAGGTCGGCACCAAG
GTCAAGAACATCCGCCTGTGCGATGGCGATCACGACATCGACTGCAAGATCGACGGCATCGGCCCGATGAAACTCAAATC
CGAGTTCGTCAGAAAAGTCTGA

Upstream 100 bases:

>100_bases
CAGCCTCCGTTGGAGCCTGCGGTTTTTTGTTGCCTGCCATCAGCGGTTAAAACCCTATACAATGTGCGACTTTTAGCGAT
CCCCTCTCCAAGGAGCCTTA

Downstream 100 bases:

>100_bases
GTCTGCTGTCTTCCATCCCGCGCCCGCCGTGGGATGGAGCTTCACCCTCCCCCGCAATCCCCAGCAAATCCTCGCGATAG
CCAAACGCCAGCTGTTTTGA

Product: PhnA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MSTLPPCPKCNSEYTYEDGTQLVCPECAHEWSAGGEAEVTSDDAVKKDSVGNVLQDGDTITVIKDLKVKGTSLVVKVGTK
VKNIRLCDGDHDIDCKIDGIGPMKLKSEFVRKV

Sequences:

>Translated_113_residues
MSTLPPCPKCNSEYTYEDGTQLVCPECAHEWSAGGEAEVTSDDAVKKDSVGNVLQDGDTITVIKDLKVKGTSLVVKVGTK
VKNIRLCDGDHDIDCKIDGIGPMKLKSEFVRKV
>Mature_112_residues
STLPPCPKCNSEYTYEDGTQLVCPECAHEWSAGGEAEVTSDDAVKKDSVGNVLQDGDTITVIKDLKVKGTSLVVKVGTKV
KNIRLCDGDHDIDCKIDGIGPMKLKSEFVRKV

Specific function: Unknown

COG id: COG2824

COG function: function code P; Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790547, Length=110, Percent_Identity=66.3636363636364, Blast_Score=157, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004624
- InterPro:   IPR013988
- InterPro:   IPR013987 [H]

Pfam domain/function: PF03831 PhnA; PF08274 PhnA_Zn_Ribbon [H]

EC number: NA

Molecular weight: Translated: 12214; Mature: 12083

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLPPCPKCNSEYTYEDGTQLVCPECAHEWSAGGEAEVTSDDAVKKDSVGNVLQDGDTI
CCCCCCCCCCCCCCEECCCCEEECCHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCEE
TVIKDLKVKGTSLVVKVGTKVKNIRLCDGDHDIDCKIDGIGPMKLKSEFVRKV
EEEECCEECCCEEEEEECCCEEEEEEECCCCCCEEEECCCCCHHHHHHHHHCC
>Mature Secondary Structure 
STLPPCPKCNSEYTYEDGTQLVCPECAHEWSAGGEAEVTSDDAVKKDSVGNVLQDGDTI
CCCCCCCCCCCCCEECCCCEEECCHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCEE
TVIKDLKVKGTSLVVKVGTKVKNIRLCDGDHDIDCKIDGIGPMKLKSEFVRKV
EEEECCEECCCEEEEEECCCEEEEEEECCCCCCEEEECCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]