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The map label for this gene is yaaD [H]

Identifier: 77461071

GI number: 77461071

Start: 5469149

End: 5469601

Strand: Reverse

Name: yaaD [H]

Synonym: Pfl01_4850

Alternate gene names: 77461071

Gene position: 5469601-5469149 (Counterclockwise)

Preceding gene: 77461072

Following gene: 77461070

Centisome position: 84.95

GC content: 58.28

Gene sequence:

>453_bases
ATGACTGAACAGGTATTGGCTGAGCAACGCATCGGCCAGAACACGGAAGTCACCTTGCACTTTGCATTGCGCCTGGAGAA
CGGCGACACGGTCGACAGTACTTTCGACAAAGCCCCTGCGACCTTCAAGGTCGGCGACGGCAACCTGCTGCCGGGCTTCG
AGGCGGCACTGTTCGGTTTCAAGGCTGGCGACAAGCGTACACTGACCGTCGAGCCGGAAAACGCCTTCGGCCAGCCGAAC
CCGCAAAACGTGCAGATCATTCCGCGTTCGCAGTTTGCGGACATGGAACTGTCGCCGGGTCTGCTGGTGATCTTCAACGA
TGCGGCCAATACTGAGCTGCCGGGTGTGGTGAAAGAGTTCGACGACGCGCAAGTGACCGTCGACTTCAATCACCCGCTGG
CTGGCAAGACGCTGACCTTTGACGTGGAAATCTTCTCCGTCAAAGCGCTGTAA

Upstream 100 bases:

>100_bases
TACTTCCCGGCGTTCAATTTCGCCGACAGCGCCATCACCGTTGGCGCGGTGATGCTGGCACTGGACATGTTCAAAAGTAA
AAAAACCGGAGAAGCCGTTC

Downstream 100 bases:

>100_bases
TTGCTGTTCTGCAGGAGCCGGCTGACCGGCTCCTGTAATGATCCAATCTTTCGCGCGCAAGACACGAGGCACCGCATGCA
AATCAAACTCGCCAACCCCC

Product: FKBP-type peptidylprolyl isomerase

Products: NA

Alternate protein names: PPIase; Rotamase [H]

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MTEQVLAEQRIGQNTEVTLHFALRLENGDTVDSTFDKAPATFKVGDGNLLPGFEAALFGFKAGDKRTLTVEPENAFGQPN
PQNVQIIPRSQFADMELSPGLLVIFNDAANTELPGVVKEFDDAQVTVDFNHPLAGKTLTFDVEIFSVKAL

Sequences:

>Translated_150_residues
MTEQVLAEQRIGQNTEVTLHFALRLENGDTVDSTFDKAPATFKVGDGNLLPGFEAALFGFKAGDKRTLTVEPENAFGQPN
PQNVQIIPRSQFADMELSPGLLVIFNDAANTELPGVVKEFDDAQVTVDFNHPLAGKTLTFDVEIFSVKAL
>Mature_149_residues
TEQVLAEQRIGQNTEVTLHFALRLENGDTVDSTFDKAPATFKVGDGNLLPGFEAALFGFKAGDKRTLTVEPENAFGQPNP
QNVQIIPRSQFADMELSPGLLVIFNDAANTELPGVVKEFDDAQVTVDFNHPLAGKTLTFDVEIFSVKAL

Specific function: PPIases accelerate the folding of proteins [H]

COG id: COG1047

COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PPIase FKBP-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786211, Length=141, Percent_Identity=41.1347517730496, Blast_Score=122, Evalue=1e-29,
Organism=Escherichia coli, GI1789748, Length=140, Percent_Identity=32.1428571428571, Blast_Score=76, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001179 [H]

Pfam domain/function: PF00254 FKBP_C [H]

EC number: =5.2.1.8 [H]

Molecular weight: Translated: 16339; Mature: 16207

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: PS50059 FKBP_PPIASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQVLAEQRIGQNTEVTLHFALRLENGDTVDSTFDKAPATFKVGDGNLLPGFEAALFGF
CCHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCHHEEEEE
KAGDKRTLTVEPENAFGQPNPQNVQIIPRSQFADMELSPGLLVIFNDAANTELPGVVKEF
CCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCHHHCC
DDAQVTVDFNHPLAGKTLTFDVEIFSVKAL
CCCEEEEEECCCCCCCEEEEEEEEEEEEEC
>Mature Secondary Structure 
TEQVLAEQRIGQNTEVTLHFALRLENGDTVDSTFDKAPATFKVGDGNLLPGFEAALFGF
CHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCHHEEEEE
KAGDKRTLTVEPENAFGQPNPQNVQIIPRSQFADMELSPGLLVIFNDAANTELPGVVKEF
CCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCHHHCC
DDAQVTVDFNHPLAGKTLTFDVEIFSVKAL
CCCEEEEEECCCCCCCEEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2121716 [H]