| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is gluQ [H]
Identifier: 77461026
GI number: 77461026
Start: 5419482
End: 5420378
Strand: Direct
Name: gluQ [H]
Synonym: Pfl01_4805
Alternate gene names: 77461026
Gene position: 5419482-5420378 (Clockwise)
Preceding gene: 77461025
Following gene: 77461027
Centisome position: 84.17
GC content: 64.99
Gene sequence:
>897_bases ATGACTGCCAACTCCTCCCCCGCCTACATTGGCCGCTTTGCCCCGACCCCCAGCGGGCACCTGCACTTCGGTTCGCTGGT TGCCGCCCTGGCCTCTTATCTGGACGCACGCTCGGTGGGCGGCCGCTGGCTGGTGCGCATGGAAGACCTCGATCCGCCTC GCGAAGAGCCGGGCGCGCAAGCGGCGATACTCAAGGCACTGGAAAGCTACGGTTTCGAATGGGACGGCGAAATGGTTCGC CAGAGCGATCGGCACGAAGCCTACGCGCAAGTGCTCGACAGCCTGTTCAATCACGGCCTCGCCTACGCCTGCACCTGCTC GCGCAAACAACTGGAGCCGTACCACGGCATTTATCCAGGACTGTGCCGCAATGCCGGCCACGGTCAGGAAGACGCCGCGA TCCGTCTTCGCGTGCCAGAGCTCGAATACCACTTCATCGACCGGGTGCAGGGCGAATACCGCCAGCATCTGGGCCGCGAC GTGGGTGATTTCGTGATCCGCCGCCGCGACGGCCTCTACGCCTACCAACTGGCGGTGGTGCTCGACGACGCCTGGCAGGG CATCACCGACATCGTGCGCGGCGCCGATCTGCTCGACTCCACGCCGCGCCAGCTCTATCTGCAGGAGTTGCTCGGCCTGC GCCAACCGCGCTATCTGCATCTGCCACTGATTACCCAGCCGGACGGCAACAAGCTCGGCAAGTCATACCGCTCGCCACCG CTTGAAGCCGATCAGGCCACGCCATTGCTGCTGCGGGCCTTGCGTGCACTGGGGCAAAACCCGGGGCACGAACTGGTCCA CGCCTCGCCGCAGGAACTGTTGAACTGGGGCAGCGCCCACTGGGATGCCTTGAAAATCCCGCGCACACTGACCCTGCCCG AAGCGCAACTGCTGTGA
Upstream 100 bases:
>100_bases AGCAGGTCGGTAAATAATCCCGGCCTGAACGAAAAACGGAGCGTGCGAACGCTCCGTTTTTGTTTCTGCCATTTTTTACT CTTCAAGTAACATCGCCCTC
Downstream 100 bases:
>100_bases CGACACTTGCAGTGGCGCGCCCATCCGTTACCATCGCCGCACGTTTTCGGGCACGCGCATAAAAAAGAGAGGCCGGGATG TACATCTATCGCTTGGTCCT
Product: glutamyl-Q tRNA(Asp) synthetase
Products: NA
Alternate protein names: Glu-Q-RSs [H]
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MTANSSPAYIGRFAPTPSGHLHFGSLVAALASYLDARSVGGRWLVRMEDLDPPREEPGAQAAILKALESYGFEWDGEMVR QSDRHEAYAQVLDSLFNHGLAYACTCSRKQLEPYHGIYPGLCRNAGHGQEDAAIRLRVPELEYHFIDRVQGEYRQHLGRD VGDFVIRRRDGLYAYQLAVVLDDAWQGITDIVRGADLLDSTPRQLYLQELLGLRQPRYLHLPLITQPDGNKLGKSYRSPP LEADQATPLLLRALRALGQNPGHELVHASPQELLNWGSAHWDALKIPRTLTLPEAQLL
Sequences:
>Translated_298_residues MTANSSPAYIGRFAPTPSGHLHFGSLVAALASYLDARSVGGRWLVRMEDLDPPREEPGAQAAILKALESYGFEWDGEMVR QSDRHEAYAQVLDSLFNHGLAYACTCSRKQLEPYHGIYPGLCRNAGHGQEDAAIRLRVPELEYHFIDRVQGEYRQHLGRD VGDFVIRRRDGLYAYQLAVVLDDAWQGITDIVRGADLLDSTPRQLYLQELLGLRQPRYLHLPLITQPDGNKLGKSYRSPP LEADQATPLLLRALRALGQNPGHELVHASPQELLNWGSAHWDALKIPRTLTLPEAQLL >Mature_297_residues TANSSPAYIGRFAPTPSGHLHFGSLVAALASYLDARSVGGRWLVRMEDLDPPREEPGAQAAILKALESYGFEWDGEMVRQ SDRHEAYAQVLDSLFNHGLAYACTCSRKQLEPYHGIYPGLCRNAGHGQEDAAIRLRVPELEYHFIDRVQGEYRQHLGRDV GDFVIRRRDGLYAYQLAVVLDDAWQGITDIVRGADLLDSTPRQLYLQELLGLRQPRYLHLPLITQPDGNKLGKSYRSPPL EADQATPLLLRALRALGQNPGHELVHASPQELLNWGSAHWDALKIPRTLTLPEAQLL
Specific function: Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble positi
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=248, Percent_Identity=37.0967741935484, Blast_Score=137, Evalue=2e-32, Organism=Escherichia coli, GI226510925, Length=283, Percent_Identity=48.4098939929329, Blast_Score=267, Evalue=7e-73, Organism=Escherichia coli, GI1788743, Length=238, Percent_Identity=34.8739495798319, Blast_Score=140, Evalue=1e-34, Organism=Caenorhabditis elegans, GI71993394, Length=248, Percent_Identity=31.8548387096774, Blast_Score=110, Evalue=7e-25, Organism=Saccharomyces cerevisiae, GI6324540, Length=247, Percent_Identity=31.9838056680162, Blast_Score=132, Evalue=8e-32, Organism=Drosophila melanogaster, GI24665321, Length=248, Percent_Identity=32.6612903225806, Blast_Score=132, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022380 - InterPro: IPR000924 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: NA
Molecular weight: Translated: 33372; Mature: 33241
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANSSPAYIGRFAPTPSGHLHFGSLVAALASYLDARSVGGRWLVRMEDLDPPREEPGAQ CCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHH AAILKALESYGFEWDGEMVRQSDRHEAYAQVLDSLFNHGLAYACTCSRKQLEPYHGIYPG HHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCCCCHH LCRNAGHGQEDAAIRLRVPELEYHFIDRVQGEYRQHLGRDVGDFVIRRRDGLYAYQLAVV HHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEHHHHH LDDAWQGITDIVRGADLLDSTPRQLYLQELLGLRQPRYLHLPLITQPDGNKLGKSYRSPP HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHCCCC LEADQATPLLLRALRALGQNPGHELVHASPQELLNWGSAHWDALKIPRTLTLPEAQLL CCCCCCCHHHHHHHHHHCCCCCCHHCCCCHHHHHCCCCCCCHHCCCCCEECCCHHHCC >Mature Secondary Structure TANSSPAYIGRFAPTPSGHLHFGSLVAALASYLDARSVGGRWLVRMEDLDPPREEPGAQ CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHH AAILKALESYGFEWDGEMVRQSDRHEAYAQVLDSLFNHGLAYACTCSRKQLEPYHGIYPG HHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCCCCHH LCRNAGHGQEDAAIRLRVPELEYHFIDRVQGEYRQHLGRDVGDFVIRRRDGLYAYQLAVV HHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEHHHHH LDDAWQGITDIVRGADLLDSTPRQLYLQELLGLRQPRYLHLPLITQPDGNKLGKSYRSPP HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHCCCC LEADQATPLLLRALRALGQNPGHELVHASPQELLNWGSAHWDALKIPRTLTLPEAQLL CCCCCCCHHHHHHHHHHCCCCCCHHCCCCHHHHHCCCCCCCHHCCCCCEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA