Click here to switch to the map view.

The map label for this gene is dksA [H]

Identifier: 77461025

GI number: 77461025

Start: 5418955

End: 5419398

Strand: Direct

Name: dksA [H]

Synonym: Pfl01_4804

Alternate gene names: 77461025

Gene position: 5418955-5419398 (Clockwise)

Preceding gene: 77461022

Following gene: 77461026

Centisome position: 84.17

GC content: 57.43

Gene sequence:

>444_bases
ATGCCCACCCAAGCAAAGCAACAGGCAAGTCAGACACTCAGCGGTTTCGAACCCTACGTCCCGAAAGCGGGCGAAGAGTA
CATGGGCGCTCCAATGCGCGCGCACTTCACCAAGATCCTGACCAAGTGGAAACTGGACTTGATGCAGGAAGTCGACCGCA
CTGTTGATCACATGAAAGACGAAGCGGCCAACTTTCCTGATCCGGCCGACCGTGCCAGCCAGGAAGAAGAGTTCGCCCTA
GAGCTGCGCGCCCGCGACCGCGAGCGCAAACTGATCAAGAAGATCGACAAGACACTGCAACTGATCGAAGACGAAGAGTA
CGGCTGGTGCGACTCTTGCGGCATCGAGATCGGCGTCAAGCGCCTCGAGGCCCGTCCGACTGCCGACATGTGCGTCGACT
GCAAGAACCTGGCGGAAATCAAGGAAAAGCAGGTCGGTAAATAA

Upstream 100 bases:

>100_bases
TGATCTGGTAAGTTCGCCCGCTTGCAGCCGCAGGGCCGGCAGGTGTCGGTGATGGAGCAATCCTGCGCAATGGATTACAA
GAGTAGAGGCGGTCCATTTC

Downstream 100 bases:

>100_bases
TCCCGGCCTGAACGAAAAACGGAGCGTGCGAACGCTCCGTTTTTGTTTCTGCCATTTTTTACTCTTCAAGTAACATCGCC
CTCATGACTGCCAACTCCTC

Product: TraR/DksA family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MPTQAKQQASQTLSGFEPYVPKAGEEYMGAPMRAHFTKILTKWKLDLMQEVDRTVDHMKDEAANFPDPADRASQEEEFAL
ELRARDRERKLIKKIDKTLQLIEDEEYGWCDSCGIEIGVKRLEARPTADMCVDCKNLAEIKEKQVGK

Sequences:

>Translated_147_residues
MPTQAKQQASQTLSGFEPYVPKAGEEYMGAPMRAHFTKILTKWKLDLMQEVDRTVDHMKDEAANFPDPADRASQEEEFAL
ELRARDRERKLIKKIDKTLQLIEDEEYGWCDSCGIEIGVKRLEARPTADMCVDCKNLAEIKEKQVGK
>Mature_146_residues
PTQAKQQASQTLSGFEPYVPKAGEEYMGAPMRAHFTKILTKWKLDLMQEVDRTVDHMKDEAANFPDPADRASQEEEFALE
LRARDRERKLIKKIDKTLQLIEDEEYGWCDSCGIEIGVKRLEARPTADMCVDCKNLAEIKEKQVGK

Specific function: Dosage-dependent suppressor of a dnaK deletion mutation. It suppressed not only the temperature-sensitive growth but also the filamentous phenotype of the dnaK deletion strain, while the defect of lambda growth is not suppressed [H]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

Organism=Escherichia coli, GI1786338, Length=135, Percent_Identity=67.4074074074074, Blast_Score=201, Evalue=1e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012784
- InterPro:   IPR020460
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 16862; Mature: 16731

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTQAKQQASQTLSGFEPYVPKAGEEYMGAPMRAHFTKILTKWKLDLMQEVDRTVDHMKD
CCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAANFPDPADRASQEEEFALELRARDRERKLIKKIDKTLQLIEDEEYGWCDSCGIEIGVK
HHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
RLEARPTADMCVDCKNLAEIKEKQVGK
HHHCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PTQAKQQASQTLSGFEPYVPKAGEEYMGAPMRAHFTKILTKWKLDLMQEVDRTVDHMKD
CCHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAANFPDPADRASQEEEFALELRARDRERKLIKKIDKTLQLIEDEEYGWCDSCGIEIGVK
HHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
RLEARPTADMCVDCKNLAEIKEKQVGK
HHHCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]