| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77460953
Identifier: 77460953
GI number: 77460953
Start: 5338067
End: 5339053
Strand: Direct
Name: 77460953
Synonym: Pfl01_4732
Alternate gene names: NA
Gene position: 5338067-5339053 (Clockwise)
Preceding gene: 77460950
Following gene: 77460954
Centisome position: 82.91
GC content: 65.75
Gene sequence:
>987_bases ATGACTGTACCTATCGCAATCATTGGCACCGGCATCGCCGGACTCTCCGCCGCCCAGGCTCTTACGGATGCCGGGCATAC CGTCCAGTTGTTCGATAAAAGCCGCGGCAGCGGCGGGCGCATGTCGAGCAAGCGCAGCGATGCCGGCTCGCTGGACATGG GCGCGCAATACTTCACTGCCCGTGACCGACGCTTCGTGACCGAAGTCCAGCGCTGGCAAAGCAAAGGCTGGGTCGCCGAA TGGGCACCGCAGCTCTACACCTTTCATGGCGGGCAGTTGAACCTGTCGCCGGACGAACAGACCCGCTGGGTCGGCACGCC GCGCATGAGCGCCATCACCCGGGGTCTGCTCGACGGACTGGAAGTGCACTTTGCTTGTCGGATCACCGAGGTCTATCGCG GTGAAGAACACTGGCACCTGCAGGACGCCGAAGGTTTCACCCACGGGCCGTTCAGCCATGTCGTCATCGCCACACCGGCG CCGCAGGCCACAGCCCTGCTGGCCGCTGCGCCGAAACTCGCCGGTGCCGCCGCCGGAGTGAAAATGGACCCGACCTGGGC CGTCGCCCTCGCCTTCGACACACCGCTGGATACGCCGATCGAAGGCTGCTTCGTCCAGGACAGCGCCCTCGACTGGCTGG CCCGCAACCGCAGCAAACCGGGACGCGAGACCACCTGCGACACCTGGGTCCTGCACGCCACCAGTGCCTGGAGCCGGCAG CACATTGACCTGCCCAAGGAAGCGGTGATCGAACAATTGCACGGCGCCTTTGCCGAATTGCTGCACAGCGCCATGCCGGC CCCGACCTTCAGCCTCGCCCACCGCTGGCTCTATGCCCGGCCGGCCAGCAGTCATGAATGGGGCACCCTGGCCGACGCCG ACCTGGGTCTGTACGCCTGTGGTGACTGGTGCCTGTCGGGTCGGGTCGAAGGGGCATGGCTCAGTGGTCAGGAGGCGGCA AGACGCTTGCACGAACACTTGCTGTGA
Upstream 100 bases:
>100_bases CAAGCTGTCAGAACCAGAACGCTGGAAGTTATACCAAAAAACAGAATTGTACAGGTTTCATCCACGGCGTAGTCTGTACA GAAAGGTAAACGAGGCCCCT
Downstream 100 bases:
>100_bases ACCGTATCAATCCGCGCAAATTGCTGCTGTCGAAATGGACAGCAGCCCACCCGCAAAACCGTGAAAAGCATTTTCTGGTG ACCGAACTGTTCCATGACGA
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: Amine Oxidase; Transmembrane Protein; Amine Oxidase Flavin-Containing; Deoxyribodipyrimidine Photolyase; NAD/Fad-Dependent Oxidoreductase Protein; NAD/FAD-Dependent Oxidoreductase; Fad Dependent Oxidoreductase
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MTVPIAIIGTGIAGLSAAQALTDAGHTVQLFDKSRGSGGRMSSKRSDAGSLDMGAQYFTARDRRFVTEVQRWQSKGWVAE WAPQLYTFHGGQLNLSPDEQTRWVGTPRMSAITRGLLDGLEVHFACRITEVYRGEEHWHLQDAEGFTHGPFSHVVIATPA PQATALLAAAPKLAGAAAGVKMDPTWAVALAFDTPLDTPIEGCFVQDSALDWLARNRSKPGRETTCDTWVLHATSAWSRQ HIDLPKEAVIEQLHGAFAELLHSAMPAPTFSLAHRWLYARPASSHEWGTLADADLGLYACGDWCLSGRVEGAWLSGQEAA RRLHEHLL
Sequences:
>Translated_328_residues MTVPIAIIGTGIAGLSAAQALTDAGHTVQLFDKSRGSGGRMSSKRSDAGSLDMGAQYFTARDRRFVTEVQRWQSKGWVAE WAPQLYTFHGGQLNLSPDEQTRWVGTPRMSAITRGLLDGLEVHFACRITEVYRGEEHWHLQDAEGFTHGPFSHVVIATPA PQATALLAAAPKLAGAAAGVKMDPTWAVALAFDTPLDTPIEGCFVQDSALDWLARNRSKPGRETTCDTWVLHATSAWSRQ HIDLPKEAVIEQLHGAFAELLHSAMPAPTFSLAHRWLYARPASSHEWGTLADADLGLYACGDWCLSGRVEGAWLSGQEAA RRLHEHLL >Mature_327_residues TVPIAIIGTGIAGLSAAQALTDAGHTVQLFDKSRGSGGRMSSKRSDAGSLDMGAQYFTARDRRFVTEVQRWQSKGWVAEW APQLYTFHGGQLNLSPDEQTRWVGTPRMSAITRGLLDGLEVHFACRITEVYRGEEHWHLQDAEGFTHGPFSHVVIATPAP QATALLAAAPKLAGAAAGVKMDPTWAVALAFDTPLDTPIEGCFVQDSALDWLARNRSKPGRETTCDTWVLHATSAWSRQH IDLPKEAVIEQLHGAFAELLHSAMPAPTFSLAHRWLYARPASSHEWGTLADADLGLYACGDWCLSGRVEGAWLSGQEAAR RLHEHLL
Specific function: Unknown
COG id: COG3380
COG function: function code R; Predicted NAD/FAD-dependent oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35784; Mature: 35652
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVPIAIIGTGIAGLSAAQALTDAGHTVQLFDKSRGSGGRMSSKRSDAGSLDMGAQYFTA CCEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHH RDRRFVTEVQRWQSKGWVAEWAPQLYTFHGGQLNLSPDEQTRWVGTPRMSAITRGLLDGL HHHHHHHHHHHHHHCCCHHHCCCCEEEEECCEEECCCCCCCEECCCCHHHHHHHHHHHHH EVHFACRITEVYRGEEHWHLQDAEGFTHGPFSHVVIATPAPQATALLAAAPKLAGAAAGV EEEEEEEEHHHHCCCCCEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHCCHHHHHHCCC KMDPTWAVALAFDTPLDTPIEGCFVQDSALDWLARNRSKPGRETTCDTWVLHATSAWSRQ EECCCEEEEEEECCCCCCCCCCEEECHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCC HIDLPKEAVIEQLHGAFAELLHSAMPAPTFSLAHRWLYARPASSHEWGTLADADLGLYAC CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEE GDWCLSGRVEGAWLSGQEAARRLHEHLL CCHHHCCCCCCEEECHHHHHHHHHHHCC >Mature Secondary Structure TVPIAIIGTGIAGLSAAQALTDAGHTVQLFDKSRGSGGRMSSKRSDAGSLDMGAQYFTA CEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHH RDRRFVTEVQRWQSKGWVAEWAPQLYTFHGGQLNLSPDEQTRWVGTPRMSAITRGLLDGL HHHHHHHHHHHHHHCCCHHHCCCCEEEEECCEEECCCCCCCEECCCCHHHHHHHHHHHHH EVHFACRITEVYRGEEHWHLQDAEGFTHGPFSHVVIATPAPQATALLAAAPKLAGAAAGV EEEEEEEEHHHHCCCCCEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHCCHHHHHHCCC KMDPTWAVALAFDTPLDTPIEGCFVQDSALDWLARNRSKPGRETTCDTWVLHATSAWSRQ EECCCEEEEEEECCCCCCCCCCEEECHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCC HIDLPKEAVIEQLHGAFAELLHSAMPAPTFSLAHRWLYARPASSHEWGTLADADLGLYAC CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEE GDWCLSGRVEGAWLSGQEAARRLHEHLL CCHHHCCCCCCEEECHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA