Click here to switch to the map view.

The map label for this gene is yfcH [H]

Identifier: 77460952

GI number: 77460952

Start: 5336967

End: 5337869

Strand: Reverse

Name: yfcH [H]

Synonym: Pfl01_4731

Alternate gene names: 77460952

Gene position: 5337869-5336967 (Counterclockwise)

Preceding gene: 77460965

Following gene: 77460951

Centisome position: 82.91

GC content: 63.46

Gene sequence:

>903_bases
ATGCGCATATTGCTGACCGGCGGTACTGGATTGATCGGACGCCAGCTTTGCCGGCACTGGTCCGGGCAGGGGCATCGCCT
GACGGTCTGGAGTCGTCGTCCGGAAAAAGTCGCGAACATCTGTGGTGCCCAGGTGCGTGGCATTGCGCGTCTGGAGGACC
TTGGCGACGAGCCGGTCGACGTGATCGTCAACCTCGCCGGCGCGCCAATTGCCGACCGGCCGTGGACCCATCGACGCAAG
GCGCTGTTGTGGAGCAGCCGGATCTCGCTGACCGAATCGTTGCTGGCGTGGCTGGAAAAACGCGGGCAGAAACCGTCACT
GCTGATCTCGGGTTCGGCCGTGGGTTGGTACGGTGACGGCGGCGAGCGCGAGTTGACCGAGGACTCGCCGCCGGTGATCG
ACGATTTCGCCAGCCAGTTGTGTATCGCCTGGGAAGAAACTGCGCAACGCGCCGAAGCAATGGGTATTCGCGTGGTGCTG
GTGCGCACCGGGCTGGTGCTGTCGGCCGAGGGCGGCTTTTTGTCGCGCCTGCTGCTGCCGTTCAAGCTCGGGCTGGGCGG
GCCTTTGGGCAACGGTCGGCAGTGGATGCCGTGGATTCATATCGACGATCAAATCGCCCTGATTGATTTTCTTCTGCACT
GCAATCAGGCGAGCGGTCCTTATAATGCGTGCGCGCCGAAACCGGTGCGCAATCGCGAGTTCGCCAAGACGCTGGGCAGT
GTGCTGCACCGCCCGGCGTTCATGCCGATGCCGGCCCTCGCCTTGAAGGTCGGGTTCGGCGAGATGTCATTGCTGTTGCT
GGGTGGCCAACGGGCCATGCCCAAGCGCTTGCTGGAAGCGGGATTCACTTTCCGGTTCACGGATTTACGCGCGGCCCTGG
ACGATCTTTCCAGCCGCCTCTGA

Upstream 100 bases:

>100_bases
TTGGCCTATGGTTAAACAATAGAGCCTGCCCGATAGAAAAGATCCCTGTTTATAAAAATAGACTAGTGATCAGGGTAAAA
CGCCACGCGAGGAAGAAGTC

Downstream 100 bases:

>100_bases
AATAGGACGTTGCATGACCGATCACGCCTTGCTTCTGGTCAACCTGGGTTCGCCGGCCTCCACTTCGGTGGCCGACGTGC
GCCGCTATCTCAATCAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MRILLTGGTGLIGRQLCRHWSGQGHRLTVWSRRPEKVANICGAQVRGIARLEDLGDEPVDVIVNLAGAPIADRPWTHRRK
ALLWSSRISLTESLLAWLEKRGQKPSLLISGSAVGWYGDGGERELTEDSPPVIDDFASQLCIAWEETAQRAEAMGIRVVL
VRTGLVLSAEGGFLSRLLLPFKLGLGGPLGNGRQWMPWIHIDDQIALIDFLLHCNQASGPYNACAPKPVRNREFAKTLGS
VLHRPAFMPMPALALKVGFGEMSLLLLGGQRAMPKRLLEAGFTFRFTDLRAALDDLSSRL

Sequences:

>Translated_300_residues
MRILLTGGTGLIGRQLCRHWSGQGHRLTVWSRRPEKVANICGAQVRGIARLEDLGDEPVDVIVNLAGAPIADRPWTHRRK
ALLWSSRISLTESLLAWLEKRGQKPSLLISGSAVGWYGDGGERELTEDSPPVIDDFASQLCIAWEETAQRAEAMGIRVVL
VRTGLVLSAEGGFLSRLLLPFKLGLGGPLGNGRQWMPWIHIDDQIALIDFLLHCNQASGPYNACAPKPVRNREFAKTLGS
VLHRPAFMPMPALALKVGFGEMSLLLLGGQRAMPKRLLEAGFTFRFTDLRAALDDLSSRL
>Mature_300_residues
MRILLTGGTGLIGRQLCRHWSGQGHRLTVWSRRPEKVANICGAQVRGIARLEDLGDEPVDVIVNLAGAPIADRPWTHRRK
ALLWSSRISLTESLLAWLEKRGQKPSLLISGSAVGWYGDGGERELTEDSPPVIDDFASQLCIAWEETAQRAEAMGIRVVL
VRTGLVLSAEGGFLSRLLLPFKLGLGGPLGNGRQWMPWIHIDDQIALIDFLLHCNQASGPYNACAPKPVRNREFAKTLGS
VLHRPAFMPMPALALKVGFGEMSLLLLGGQRAMPKRLLEAGFTFRFTDLRAALDDLSSRL

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=299, Percent_Identity=37.4581939799331, Blast_Score=183, Evalue=1e-46,
Organism=Escherichia coli, GI1788642, Length=299, Percent_Identity=49.8327759197324, Blast_Score=284, Evalue=4e-78,
Organism=Drosophila melanogaster, GI28573846, Length=298, Percent_Identity=34.5637583892617, Blast_Score=172, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 32986; Mature: 32986

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILLTGGTGLIGRQLCRHWSGQGHRLTVWSRRPEKVANICGAQVRGIARLEDLGDEPVD
CEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
VIVNLAGAPIADRPWTHRRKALLWSSRISLTESLLAWLEKRGQKPSLLISGSAVGWYGDG
HHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEECCCC
GERELTEDSPPVIDDFASQLCIAWEETAQRAEAMGIRVVLVRTGLVLSAEGGFLSRLLLP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEEEECCCCHHHHHHHH
FKLGLGGPLGNGRQWMPWIHIDDQIALIDFLLHCNQASGPYNACAPKPVRNREFAKTLGS
HHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
VLHRPAFMPMPALALKVGFGEMSLLLLGGQRAMPKRLLEAGFTFRFTDLRAALDDLSSRL
HHHCCCCCCCCHHHEEECCCCEEEEEECCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHCC
>Mature Secondary Structure
MRILLTGGTGLIGRQLCRHWSGQGHRLTVWSRRPEKVANICGAQVRGIARLEDLGDEPVD
CEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
VIVNLAGAPIADRPWTHRRKALLWSSRISLTESLLAWLEKRGQKPSLLISGSAVGWYGDG
HHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEECCCC
GERELTEDSPPVIDDFASQLCIAWEETAQRAEAMGIRVVLVRTGLVLSAEGGFLSRLLLP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEEEECCCCHHHHHHHH
FKLGLGGPLGNGRQWMPWIHIDDQIALIDFLLHCNQASGPYNACAPKPVRNREFAKTLGS
HHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
VLHRPAFMPMPALALKVGFGEMSLLLLGGQRAMPKRLLEAGFTFRFTDLRAALDDLSSRL
HHHCCCCCCCCHHHEEECCCCEEEEEECCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]