| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is malT [H]
Identifier: 77460927
GI number: 77460927
Start: 5310534
End: 5313269
Strand: Reverse
Name: malT [H]
Synonym: Pfl01_4706
Alternate gene names: 77460927
Gene position: 5313269-5310534 (Counterclockwise)
Preceding gene: 77460928
Following gene: 77460925
Centisome position: 82.52
GC content: 62.13
Gene sequence:
>2736_bases ATGACTGATCTGTCCCCACTTCCGGGTCCCGCAAGCGTTGCCGTCGCGGCACTGGACGGGCGTTTTTTTCGCCCGCCACT GCCTGACGGCTACGTCATGCGGCCACGACTGTGCGAGCGCCTGCAAGCCGGGCTCGGTGGACGTCTGTTGCTGGTCAGCG CCCCGGCCGGGTTCGGCAAAAGCTCGCTGGCCGTGGAGTTCTGTCAAAGCCTGCCGGCGAACTGGCACAGCCTGTGGCTG GGGTTGAGCCCGCGGGACAACGACCCGGGGCGTTTTCTCGAGCGTCTGCTCGAAGGTTTGCAGGATTACTTTCCGCAACT GGGCAGTCGGGCACTGGGGCTGCTGAAAATGCGCCAGCGTCATCAGCCGTTCGCCTTCGAGGAATGGCTCGACGGCCTGC TCGATGAGCTGGCTCAGCATCTCGAACCGTGCTCACCCCTGTTGCTGGTGCTGGACGACTATCACCTCGCACAAGGGCCG GTACTCGACCGTTGCCTGCAATTTTTCCTCAACCATTTGCCCGACGGTCTGCTGGTCATGGTCACCAGTCGGCAACGGCC GGACTGGCACCTGGCTCGCCTGCGCCTGTCGCGGCAATTGCTGGAACTGCACGAACAGGACCTTCGCCTGACCCACGACG AAGCCTCGGCATTACTCGACCGGCACCGTAGCTCCCTTCGTGGCGAGGCGCTGGAAAACCTGATACAGCGCAGTGAAGGC TGGGTCGCCGGCCTGCGATTCTGGCTGCTGGCCGAGTCCGAAGCCGGAGGGGACTCGGTGTTGCCTCAGGCGCTGAATGG CGGGGAAGGGCTGATCCGCGATTACCTGCTGGAGGAAGTCATCGATTGCCTGCCAGCCGAAGTGCAGGCGTTTCTCTACG ACACCGCGCCGCAGGAGCGTTTTTGCAGCGAGCTGTGCGACGCTGTGCGCGAAGCCCATGACAGTGCTGAAATCCTGCGT TTCCTGCTGGCGCATCAGGTGTTTCTGGTGCCCCTGGACGAGCACGGGCACTGGTATCGCTATCACCATCTGTTTTCCGA TCTGTTGCGCAGTCGTCCGATCACCGGGGCGATAGTCCCGGCTGCCACGCTGCACTTGCGCGCCTGTCGCTGGTTCAATG CGCAGGGGCTGCTGGATGAAGCCGTGGAGCAGGCCTTGCGCGCAGGGCATCTGGACGTGGCGGCGAATCTGGTACAGAAC CTGTCCGAAGAACAACTGCTGGCCGAGCAGAACGTCGGTATGCTACTGCGATGGAAAATGGACTTGCCTGACAGCCTGCT GATCAGCACCCCGCGCCTGATCGTGCTGTACAGCTGGGCGTTGGGATTGGCGTGTCAGCTCGATGCTGCCGAAGAACTTG CCAGTCATCTGAGCCGGTTTCTGCCGGCACCCTCAGCGACAGCGCAGAAGTCGATGCTTGCCCAATGGCTGGCGCTGAAG GGGATCATCGCCCGTGGGCGAGGGCACCGCCAGCAGACCATCGAGTATTGCAGTGAAGCGCTGGAAAGCTTGCCGGCCAA GCGTTACGGCCAGCGTCTGATGTGCCTTTCCACTTTATCCAACCTGGCGATCGCCGACGGCGATCTGTGGCGTGCCCGAG GCTTGAACCGCGAATCCCTGGAACTGGCGCAGCGGGTCGGCAATCCGCTGTTCGAGGCGTTGGCACATTACGATCGCGCC CGCGTCCTGCAGGCTCGCGGCGAGATTATGCGTGCGCTCGATGAAGTGCGTCAGGGACTGGACCGTCTGCGCGGACTGTC GGCACAACGCTTGTACGCAGTCCGTGCCCGGCTGACGCTGTATGAAGGTTTCCTGCTGGCCATGCGTCTGCAGCCACAAG TGGCACGGGCGCGATTGCAGGCTGGCTTGAGCGAGGCACGGGCCTGTCGTGATATCAGCGTATTGATCGGCCACTGCGTG ATCGCCCGGCTCGAGGGCAGCAGTGGTGATTTTGCCAAGGCCTTCGCCGAGCTGGCAGAAGCCGAACGCCTGATGCACAT CTGGGACGTTCCACCGATCTACTATCTGGCGATGATCACGCTGGTCAAATGCGAACTGTGGCTGTCCCAGGGGCGCATTG ATCTGGCCGAGGCCTGGCTGGCGCGGTTGGGTCAGACCTATACCGGCGAGCGCGCGGCCGCGCCGCCGGAGTTCCACCCT CAATTGCCGTTGCACGTCGAATTGCAGCAGGCGCTGCTGGATGTCATTCAGGGACAACCCATGCTCGCCGAAGGGCGATT GAATGTCTTGCTGGAAAACGGTCAGCAAACCGGACGACAACTGCTCAGCGTGATGGCGTTGACGCAAAAGGTTGTGCTTT TACTGGCAGGCGGGCGCGAGTCCGAGGCTCGCAAGGCTTTGGGGCAGGCGCTGGAGGCGGCTGCTGGCGGTGTGCTGCAA CCTTTCGAGATCTTGCTCAAAGAGCATTCGGAGTGGTTGCGCGGGCAATTGCAACTGAACGCAGCGACCGCGTTTTGCCA GCAGTTGCTGGAGCACTTTCCACAGGCGAGCGTCCGCTCGCAAGCGGAATCCGTTACGACCGAGCAGCTCAGTTCCCGTG AATTGGCCGTATTGCGGTTGATTGCACAAGGCTGCTCGAACCAGGAAATCAGCGATCAGCTGTTTATTTCCCTGCATACC GTGAAGACCCATGCCAGCCACATCAACAGCAAACTCGGAGTCGAGCGACGTACACAGGCAGTGGCGCGCGCCAAGGAGCT GGGGGTCTTGAGTTGA
Upstream 100 bases:
>100_bases TTGTAGCCATTTGTAGCAACGACCTTCATAACCGCTCCGTTTAAGGCTAGTCTGCGGGCATCTGCTACGCCGCCAACAGC CATACGAACAAGAGCCGGCC
Downstream 100 bases:
>100_bases TCGGTACAGGCTTCCACTCAACAAAACGCCCCGAACCAGTCGGGGCGTTTTGTTTTACGGGCTGACCTGTTTCAGATCAT GTTTGCAGATCAGGCCACCA
Product: ATP-dependent transcription regulator LuxR
Products: NA
Alternate protein names: ATP-dependent transcriptional activator malT [H]
Number of amino acids: Translated: 911; Mature: 910
Protein sequence:
>911_residues MTDLSPLPGPASVAVAALDGRFFRPPLPDGYVMRPRLCERLQAGLGGRLLLVSAPAGFGKSSLAVEFCQSLPANWHSLWL GLSPRDNDPGRFLERLLEGLQDYFPQLGSRALGLLKMRQRHQPFAFEEWLDGLLDELAQHLEPCSPLLLVLDDYHLAQGP VLDRCLQFFLNHLPDGLLVMVTSRQRPDWHLARLRLSRQLLELHEQDLRLTHDEASALLDRHRSSLRGEALENLIQRSEG WVAGLRFWLLAESEAGGDSVLPQALNGGEGLIRDYLLEEVIDCLPAEVQAFLYDTAPQERFCSELCDAVREAHDSAEILR FLLAHQVFLVPLDEHGHWYRYHHLFSDLLRSRPITGAIVPAATLHLRACRWFNAQGLLDEAVEQALRAGHLDVAANLVQN LSEEQLLAEQNVGMLLRWKMDLPDSLLISTPRLIVLYSWALGLACQLDAAEELASHLSRFLPAPSATAQKSMLAQWLALK GIIARGRGHRQQTIEYCSEALESLPAKRYGQRLMCLSTLSNLAIADGDLWRARGLNRESLELAQRVGNPLFEALAHYDRA RVLQARGEIMRALDEVRQGLDRLRGLSAQRLYAVRARLTLYEGFLLAMRLQPQVARARLQAGLSEARACRDISVLIGHCV IARLEGSSGDFAKAFAELAEAERLMHIWDVPPIYYLAMITLVKCELWLSQGRIDLAEAWLARLGQTYTGERAAAPPEFHP QLPLHVELQQALLDVIQGQPMLAEGRLNVLLENGQQTGRQLLSVMALTQKVVLLLAGGRESEARKALGQALEAAAGGVLQ PFEILLKEHSEWLRGQLQLNAATAFCQQLLEHFPQASVRSQAESVTTEQLSSRELAVLRLIAQGCSNQEISDQLFISLHT VKTHASHINSKLGVERRTQAVARAKELGVLS
Sequences:
>Translated_911_residues MTDLSPLPGPASVAVAALDGRFFRPPLPDGYVMRPRLCERLQAGLGGRLLLVSAPAGFGKSSLAVEFCQSLPANWHSLWL GLSPRDNDPGRFLERLLEGLQDYFPQLGSRALGLLKMRQRHQPFAFEEWLDGLLDELAQHLEPCSPLLLVLDDYHLAQGP VLDRCLQFFLNHLPDGLLVMVTSRQRPDWHLARLRLSRQLLELHEQDLRLTHDEASALLDRHRSSLRGEALENLIQRSEG WVAGLRFWLLAESEAGGDSVLPQALNGGEGLIRDYLLEEVIDCLPAEVQAFLYDTAPQERFCSELCDAVREAHDSAEILR FLLAHQVFLVPLDEHGHWYRYHHLFSDLLRSRPITGAIVPAATLHLRACRWFNAQGLLDEAVEQALRAGHLDVAANLVQN LSEEQLLAEQNVGMLLRWKMDLPDSLLISTPRLIVLYSWALGLACQLDAAEELASHLSRFLPAPSATAQKSMLAQWLALK GIIARGRGHRQQTIEYCSEALESLPAKRYGQRLMCLSTLSNLAIADGDLWRARGLNRESLELAQRVGNPLFEALAHYDRA RVLQARGEIMRALDEVRQGLDRLRGLSAQRLYAVRARLTLYEGFLLAMRLQPQVARARLQAGLSEARACRDISVLIGHCV IARLEGSSGDFAKAFAELAEAERLMHIWDVPPIYYLAMITLVKCELWLSQGRIDLAEAWLARLGQTYTGERAAAPPEFHP QLPLHVELQQALLDVIQGQPMLAEGRLNVLLENGQQTGRQLLSVMALTQKVVLLLAGGRESEARKALGQALEAAAGGVLQ PFEILLKEHSEWLRGQLQLNAATAFCQQLLEHFPQASVRSQAESVTTEQLSSRELAVLRLIAQGCSNQEISDQLFISLHT VKTHASHINSKLGVERRTQAVARAKELGVLS >Mature_910_residues TDLSPLPGPASVAVAALDGRFFRPPLPDGYVMRPRLCERLQAGLGGRLLLVSAPAGFGKSSLAVEFCQSLPANWHSLWLG LSPRDNDPGRFLERLLEGLQDYFPQLGSRALGLLKMRQRHQPFAFEEWLDGLLDELAQHLEPCSPLLLVLDDYHLAQGPV LDRCLQFFLNHLPDGLLVMVTSRQRPDWHLARLRLSRQLLELHEQDLRLTHDEASALLDRHRSSLRGEALENLIQRSEGW VAGLRFWLLAESEAGGDSVLPQALNGGEGLIRDYLLEEVIDCLPAEVQAFLYDTAPQERFCSELCDAVREAHDSAEILRF LLAHQVFLVPLDEHGHWYRYHHLFSDLLRSRPITGAIVPAATLHLRACRWFNAQGLLDEAVEQALRAGHLDVAANLVQNL SEEQLLAEQNVGMLLRWKMDLPDSLLISTPRLIVLYSWALGLACQLDAAEELASHLSRFLPAPSATAQKSMLAQWLALKG IIARGRGHRQQTIEYCSEALESLPAKRYGQRLMCLSTLSNLAIADGDLWRARGLNRESLELAQRVGNPLFEALAHYDRAR VLQARGEIMRALDEVRQGLDRLRGLSAQRLYAVRARLTLYEGFLLAMRLQPQVARARLQAGLSEARACRDISVLIGHCVI ARLEGSSGDFAKAFAELAEAERLMHIWDVPPIYYLAMITLVKCELWLSQGRIDLAEAWLARLGQTYTGERAAAPPEFHPQ LPLHVELQQALLDVIQGQPMLAEGRLNVLLENGQQTGRQLLSVMALTQKVVLLLAGGRESEARKALGQALEAAAGGVLQP FEILLKEHSEWLRGQLQLNAATAFCQQLLEHFPQASVRSQAESVTTEQLSSRELAVLRLIAQGCSNQEISDQLFISLHTV KTHASHINSKLGVERRTQAVARAKELGVLS
Specific function: Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box):5'-GGA[TG]GA-3' [H]
COG id: COG2909
COG function: function code K; ATP-dependent transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI2367223, Length=934, Percent_Identity=26.2312633832976, Blast_Score=195, Evalue=8e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016032 - InterPro: IPR011990 - InterPro: IPR000792 - InterPro: IPR011991 [H]
Pfam domain/function: PF00196 GerE [H]
EC number: NA
Molecular weight: Translated: 101564; Mature: 101433
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLSPLPGPASVAVAALDGRFFRPPLPDGYVMRPRLCERLQAGLGGRLLLVSAPAGFGK CCCCCCCCCCHHHEEEEECCCCCCCCCCCCCEECHHHHHHHHHCCCCEEEEEECCCCCCC SSLAVEFCQSLPANWHSLWLGLSPRDNDPGRFLERLLEGLQDYFPQLGSRALGLLKMRQR HHHHHHHHHHCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HQPFAFEEWLDGLLDELAQHLEPCSPLLLVLDDYHLAQGPVLDRCLQFFLNHLPDGLLVM CCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEE VTSRQRPDWHLARLRLSRQLLELHEQDLRLTHDEASALLDRHRSSLRGEALENLIQRSEG EECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WVAGLRFWLLAESEAGGDSVLPQALNGGEGLIRDYLLEEVIDCLPAEVQAFLYDTAPQER HHHHHHHHEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHH FCSELCDAVREAHDSAEILRFLLAHQVFLVPLDEHGHWYRYHHLFSDLLRSRPITGAIVP HHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHH AATLHLRACRWFNAQGLLDEAVEQALRAGHLDVAANLVQNLSEEQLLAEQNVGMLLRWKM HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCCCEEEEEEC DLPDSLLISTPRLIVLYSWALGLACQLDAAEELASHLSRFLPAPSATAQKSMLAQWLALK CCCCHHHHCCCHHHHHHHHHHHHHEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH GIIARGRGHRQQTIEYCSEALESLPAKRYGQRLMCLSTLSNLAIADGDLWRARGLNRESL HHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHH ELAQRVGNPLFEALAHYDRARVLQARGEIMRALDEVRQGLDRLRGLSAQRLYAVRARLTL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH YEGFLLAMRLQPQVARARLQAGLSEARACRDISVLIGHCVIARLEGSSGDFAKAFAELAE HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AERLMHIWDVPPIYYLAMITLVKCELWLSQGRIDLAEAWLARLGQTYTGERAAAPPEFHP HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC QLPLHVELQQALLDVIQGQPMLAEGRLNVLLENGQQTGRQLLSVMALTQKVVLLLAGGRE CCCCHHHHHHHHHHHHCCCCCEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC SEARKALGQALEAAAGGVLQPFEILLKEHSEWLRGQLQLNAATAFCQQLLEHFPQASVRS HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH QAESVTTEQLSSRELAVLRLIAQGCSNQEISDQLFISLHTVKTHASHINSKLGVERRTQA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHH VARAKELGVLS HHHHHHCCCCC >Mature Secondary Structure TDLSPLPGPASVAVAALDGRFFRPPLPDGYVMRPRLCERLQAGLGGRLLLVSAPAGFGK CCCCCCCCCHHHEEEEECCCCCCCCCCCCCEECHHHHHHHHHCCCCEEEEEECCCCCCC SSLAVEFCQSLPANWHSLWLGLSPRDNDPGRFLERLLEGLQDYFPQLGSRALGLLKMRQR HHHHHHHHHHCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HQPFAFEEWLDGLLDELAQHLEPCSPLLLVLDDYHLAQGPVLDRCLQFFLNHLPDGLLVM CCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEE VTSRQRPDWHLARLRLSRQLLELHEQDLRLTHDEASALLDRHRSSLRGEALENLIQRSEG EECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WVAGLRFWLLAESEAGGDSVLPQALNGGEGLIRDYLLEEVIDCLPAEVQAFLYDTAPQER HHHHHHHHEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHH FCSELCDAVREAHDSAEILRFLLAHQVFLVPLDEHGHWYRYHHLFSDLLRSRPITGAIVP HHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHH AATLHLRACRWFNAQGLLDEAVEQALRAGHLDVAANLVQNLSEEQLLAEQNVGMLLRWKM HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCCCEEEEEEC DLPDSLLISTPRLIVLYSWALGLACQLDAAEELASHLSRFLPAPSATAQKSMLAQWLALK CCCCHHHHCCCHHHHHHHHHHHHHEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH GIIARGRGHRQQTIEYCSEALESLPAKRYGQRLMCLSTLSNLAIADGDLWRARGLNRESL HHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHH ELAQRVGNPLFEALAHYDRARVLQARGEIMRALDEVRQGLDRLRGLSAQRLYAVRARLTL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH YEGFLLAMRLQPQVARARLQAGLSEARACRDISVLIGHCVIARLEGSSGDFAKAFAELAE HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AERLMHIWDVPPIYYLAMITLVKCELWLSQGRIDLAEAWLARLGQTYTGERAAAPPEFHP HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC QLPLHVELQQALLDVIQGQPMLAEGRLNVLLENGQQTGRQLLSVMALTQKVVLLLAGGRE CCCCHHHHHHHHHHHHCCCCCEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC SEARKALGQALEAAAGGVLQPFEILLKEHSEWLRGQLQLNAATAFCQQLLEHFPQASVRS HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH QAESVTTEQLSSRELAVLRLIAQGCSNQEISDQLFISLHTVKTHASHINSKLGVERRTQA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHH VARAKELGVLS HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA