| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77460845
Identifier: 77460845
GI number: 77460845
Start: 5223413
End: 5224759
Strand: Direct
Name: 77460845
Synonym: Pfl01_4624
Alternate gene names: NA
Gene position: 5223413-5224759 (Clockwise)
Preceding gene: 77460844
Following gene: 77460846
Centisome position: 81.13
GC content: 41.72
Gene sequence:
>1347_bases TTGATAATTAATTTTTTTGATAGCCAAATAATTATAGAAACACAGCAGATTCATGATGGGGAACAAATGGAAGGCTTTGC GGAATACAACACAAAACTTGAGCAGGTCTTCCACCTATGGAAAAAAGACGCTAATTCCGAGTTTTCCAATCACAGCAATG TCACAGCAGCGAAAGTAAGAGAACTGATAGACATTACGACCTTACGCGAATCTGGGGTATTTTTTACTAGCGACGCTTTG GCGGAAAAAGCGATTAACTCTTTTAACTCGCCAATTAATGATCGTGCTCTCGTCGTAGACCCAACATGCGGATCAGGAAG TCTTTTGGTTGCCGCCTCAAGAAAGCTTTCCGTAATGCCTTTAGCCAGCGAAACCTTAAAAAAGTGGGGTAAACAGCTGT GCGGAATTGATATATTCCCAGAATTTGTTTATTGCACCAAGCTGAGACTAGTACTGGAAAGTTTAGTAAGAGGAGCTATA GCAGATAAAAATTTATCTGAACTTTTGAACCTACTAACAAATATTCACTCCGGCGACTGCTTAGACAACACTGCCATCAT CGCTAAAGCCACGCACCTTGCGCTAAACCCTCCTTACAACAACTCGAAGACAATAGCAAAATACAGCTGGGCCAATGGAA AAATAAACAACGCTGCAATTTATTATTATGAGCTATCACTTGCATTAAAGGATGGCTGTTCGATTTCAGCTATTTTGCCT GATGTTTTAAGAAGCGGAAGTAGGTTTGAAGCATGGCGCAACACTATCGAGCCCGCACTAAAATCTTCCAAAGTGTCCGT CGAAGGCAGATTCGACAAACAAACTGATATCGATATTTTCATACTCAATGGATTAGTTGACCGCAAAGGCTCAAACAAAG TTGAATGGCAGACAGCGGCAACATTAGGTATCGGGGACTGCCCTAAAATTCGAGATTTATTTGAAGTTGCAGTTGGAGCC GTCGTGCCTTACAGAGACCCTCATGAAGGTAAACTGTACGCATACATTCATCCAAAAACACTTCCACGGTGGGGAGAGAT AAGTAAGATCCCGGAAAACCGAAAATTTTTAGGTAGAGTTTTCCAACCCCCCTTCGTTGCTGTCAGAAGAACATCTGGAC CTAGAGATAAACATCGAGCCGTACCGACTCTAGTGCTAGGAAAAAGATTAGTCGCAGTCGAAAACCACCTAATCGTATTA ACCCCAAAAAATGGGAGTCTAGATAGGTGCCGCAAACTTTCAGAATTACTCAAAGAAAACCATATCAATGAGTTTCTGAA CAATAGGATTCGATGCCGCCACTTAACAGTATCGGCAATATCAGAAATACCATGGAGGTTTGAATGA
Upstream 100 bases:
>100_bases GGTTGTGATTCCATCAGGGCTGCTGATTGACGTTCAAATGCTTACTCATTGAAGGCGACCTGATAGTTTAAAATATCAAA CCATACAAACCTTACAGCTT
Downstream 100 bases:
>100_bases AAGAATTGTTAGATGAGCTGCCTTTTGAGATCGCTGCTCGCTTACCTATTCAGCTCGGACGGCAAAGCATATCGAGCTCT ATGGTTGCTATTTCTGAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MIINFFDSQIIIETQQIHDGEQMEGFAEYNTKLEQVFHLWKKDANSEFSNHSNVTAAKVRELIDITTLRESGVFFTSDAL AEKAINSFNSPINDRALVVDPTCGSGSLLVAASRKLSVMPLASETLKKWGKQLCGIDIFPEFVYCTKLRLVLESLVRGAI ADKNLSELLNLLTNIHSGDCLDNTAIIAKATHLALNPPYNNSKTIAKYSWANGKINNAAIYYYELSLALKDGCSISAILP DVLRSGSRFEAWRNTIEPALKSSKVSVEGRFDKQTDIDIFILNGLVDRKGSNKVEWQTAATLGIGDCPKIRDLFEVAVGA VVPYRDPHEGKLYAYIHPKTLPRWGEISKIPENRKFLGRVFQPPFVAVRRTSGPRDKHRAVPTLVLGKRLVAVENHLIVL TPKNGSLDRCRKLSELLKENHINEFLNNRIRCRHLTVSAISEIPWRFE
Sequences:
>Translated_448_residues MIINFFDSQIIIETQQIHDGEQMEGFAEYNTKLEQVFHLWKKDANSEFSNHSNVTAAKVRELIDITTLRESGVFFTSDAL AEKAINSFNSPINDRALVVDPTCGSGSLLVAASRKLSVMPLASETLKKWGKQLCGIDIFPEFVYCTKLRLVLESLVRGAI ADKNLSELLNLLTNIHSGDCLDNTAIIAKATHLALNPPYNNSKTIAKYSWANGKINNAAIYYYELSLALKDGCSISAILP DVLRSGSRFEAWRNTIEPALKSSKVSVEGRFDKQTDIDIFILNGLVDRKGSNKVEWQTAATLGIGDCPKIRDLFEVAVGA VVPYRDPHEGKLYAYIHPKTLPRWGEISKIPENRKFLGRVFQPPFVAVRRTSGPRDKHRAVPTLVLGKRLVAVENHLIVL TPKNGSLDRCRKLSELLKENHINEFLNNRIRCRHLTVSAISEIPWRFE >Mature_448_residues MIINFFDSQIIIETQQIHDGEQMEGFAEYNTKLEQVFHLWKKDANSEFSNHSNVTAAKVRELIDITTLRESGVFFTSDAL AEKAINSFNSPINDRALVVDPTCGSGSLLVAASRKLSVMPLASETLKKWGKQLCGIDIFPEFVYCTKLRLVLESLVRGAI ADKNLSELLNLLTNIHSGDCLDNTAIIAKATHLALNPPYNNSKTIAKYSWANGKINNAAIYYYELSLALKDGCSISAILP DVLRSGSRFEAWRNTIEPALKSSKVSVEGRFDKQTDIDIFILNGLVDRKGSNKVEWQTAATLGIGDCPKIRDLFEVAVGA VVPYRDPHEGKLYAYIHPKTLPRWGEISKIPENRKFLGRVFQPPFVAVRRTSGPRDKHRAVPTLVLGKRLVAVENHLIVL TPKNGSLDRCRKLSELLKENHINEFLNNRIRCRHLTVSAISEIPWRFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50256; Mature: 50256
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIINFFDSQIIIETQQIHDGEQMEGFAEYNTKLEQVFHLWKKDANSEFSNHSNVTAAKVR CEEEEECCEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH ELIDITTLRESGVFFTSDALAEKAINSFNSPINDRALVVDPTCGSGSLLVAASRKLSVMP HHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEECCCEEEEE LASETLKKWGKQLCGIDIFPEFVYCTKLRLVLESLVRGAIADKNLSELLNLLTNIHSGDC CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC LDNTAIIAKATHLALNPPYNNSKTIAKYSWANGKINNAAIYYYELSLALKDGCSISAILP CCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEEEEEEECCCCCHHHHHH DVLRSGSRFEAWRNTIEPALKSSKVSVEGRFDKQTDIDIFILNGLVDRKGSNKVEWQTAA HHHCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEEEEEE TLGIGDCPKIRDLFEVAVGAVVPYRDPHEGKLYAYIHPKTLPRWGEISKIPENRKFLGRV EECCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHH FQPPFVAVRRTSGPRDKHRAVPTLVLGKRLVAVENHLIVLTPKNGSLDRCRKLSELLKEN CCCCEEEEECCCCCCHHHHCCCHHHHCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHHH HINEFLNNRIRCRHLTVSAISEIPWRFE HHHHHHCCCEEEEEEEHHHHHCCCCCCC >Mature Secondary Structure MIINFFDSQIIIETQQIHDGEQMEGFAEYNTKLEQVFHLWKKDANSEFSNHSNVTAAKVR CEEEEECCEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH ELIDITTLRESGVFFTSDALAEKAINSFNSPINDRALVVDPTCGSGSLLVAASRKLSVMP HHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEECCCEEEEE LASETLKKWGKQLCGIDIFPEFVYCTKLRLVLESLVRGAIADKNLSELLNLLTNIHSGDC CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC LDNTAIIAKATHLALNPPYNNSKTIAKYSWANGKINNAAIYYYELSLALKDGCSISAILP CCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEEEEEEECCCCCHHHHHH DVLRSGSRFEAWRNTIEPALKSSKVSVEGRFDKQTDIDIFILNGLVDRKGSNKVEWQTAA HHHCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEEEEEE TLGIGDCPKIRDLFEVAVGAVVPYRDPHEGKLYAYIHPKTLPRWGEISKIPENRKFLGRV EECCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHH FQPPFVAVRRTSGPRDKHRAVPTLVLGKRLVAVENHLIVLTPKNGSLDRCRKLSELLKEN CCCCEEEEECCCCCCHHHHCCCHHHHCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHHH HINEFLNNRIRCRHLTVSAISEIPWRFE HHHHHHCCCEEEEEEEHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA