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The map label for this gene is yajC [H]

Identifier: 77460841

GI number: 77460841

Start: 5219155

End: 5219490

Strand: Reverse

Name: yajC [H]

Synonym: Pfl01_4620

Alternate gene names: 77460841

Gene position: 5219490-5219155 (Counterclockwise)

Preceding gene: 77460842

Following gene: 77460840

Centisome position: 81.07

GC content: 58.33

Gene sequence:

>336_bases
ATGAGCTTTTTTATCTCTAATGCCATGGCTGACGCGGCTGCACCGGCTGCAGCGCCTATGGGCGGCGGCTTCGAGTGGAT
TTTCCTGGTCGGCTTCCTGGTCATCTTCTACCTGATGATCTGGCGTCCACAGGCCAAGCGCGCCAAAGAGCAGAAGAACC
TGCTGAGCAGCCTGCAGAAGGGCGACGAAGTGGTCACCACCGGCGGCATCGCCGGCAAGATCACCAAAGTGGCCGATGAC
TTCGTGGTTCTGGAAGTTTCCGACACCGTGGAAATGAAGTTCCAGAAGGGCGCCATCGCCGCCACGCTGCCAAAAGGCAC
GCTGAAAGCGATCTAA

Upstream 100 bases:

>100_bases
GCCTTTGTCGATGCCTTCTACGCCAAACGCGGGCTTCCCGTTCCGCCTTTGGACTGAGTTTTCTGACCCCAAGATTCAAC
ATTTGCAACTGGAGTGCTAA

Downstream 100 bases:

>100_bases
GGTTCCAACTTCTACTCAATCGACGGGGCGCGCAAGGCGCCCCGCGTTCATAACGGGCGGCGTGATGCTGAACAAATATC
CTCTGTGGAAATACATTCTG

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MSFFISNAMADAAAPAAAPMGGGFEWIFLVGFLVIFYLMIWRPQAKRAKEQKNLLSSLQKGDEVVTTGGIAGKITKVADD
FVVLEVSDTVEMKFQKGAIAATLPKGTLKAI

Sequences:

>Translated_111_residues
MSFFISNAMADAAAPAAAPMGGGFEWIFLVGFLVIFYLMIWRPQAKRAKEQKNLLSSLQKGDEVVTTGGIAGKITKVADD
FVVLEVSDTVEMKFQKGAIAATLPKGTLKAI
>Mature_110_residues
SFFISNAMADAAAPAAAPMGGGFEWIFLVGFLVIFYLMIWRPQAKRAKEQKNLLSSLQKGDEVVTTGGIAGKITKVADDF
VVLEVSDTVEMKFQKGAIAATLPKGTLKAI

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=113, Percent_Identity=49.5575221238938, Blast_Score=108, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 11897; Mature: 11766

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFISNAMADAAAPAAAPMGGGFEWIFLVGFLVIFYLMIWRPQAKRAKEQKNLLSSLQK
CCEECCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
GDEVVTTGGIAGKITKVADDFVVLEVSDTVEMKFQKGAIAATLPKGTLKAI
CCCEEECCCCCHHHHHCCCCEEEEEECCCEEEEECCCCEEEECCCCCCCCC
>Mature Secondary Structure 
SFFISNAMADAAAPAAAPMGGGFEWIFLVGFLVIFYLMIWRPQAKRAKEQKNLLSSLQK
CEECCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
GDEVVTTGGIAGKITKVADDFVVLEVSDTVEMKFQKGAIAATLPKGTLKAI
CCCEEECCCCCHHHHHCCCCEEEEEECCCEEEEECCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]