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The map label for this gene is yqjH [H]

Identifier: 77460794

GI number: 77460794

Start: 5167757

End: 5168542

Strand: Direct

Name: yqjH [H]

Synonym: Pfl01_4573

Alternate gene names: 77460794

Gene position: 5167757-5168542 (Clockwise)

Preceding gene: 77460793

Following gene: 77460797

Centisome position: 80.26

GC content: 62.98

Gene sequence:

>786_bases
ATGACTGAAGTCCAGACCCAAGGCATCCACCGTGTGATGCATGAAATCAAACGCCGCCGACTCGAGGTTTTGCGAGTGGT
CGATCTGACCCCGCGCATGCGCCGCATCACTCTTGGCGGTCCGGAACTGGCCGGGTTCATCAGCCTCGGTACCGACGATC
ACGTCAAACTGCTGTTCCCGCAGAACGCCGAACAGGCCGCCGCGCTGGAAACTTTGGTGCTGGGTGCCGGCAAGAGCGAT
GTGCCGATGCCGGAGATGCGCGACTACACCCCGCGCCGTTACGACCTCGACAAGCTTGAGCTGGACATCGACTTCGTCCT
GCACGGCGACGGCCCTGCCTCGACCTGGGCTGAACAGGCCAGACCGGGACAGTTCCTGCACATCGGCGGCCCGCGCGGTT
CGATGATCGTGCCGGACATCTTCGACAGCTACCTGCTGATCGGCGACGAAACCGCCCTGCCCGCCATCGCCCGCCGCCTC
GAAGGCCTGGCGGCCAATCGCAAGGCGCTGGTGGTGATCGAAGTGGAAAACGGCAAGGAGCAGCAAACGCTGGAAAGCGC
GGCACAGGTCAATGTGATCTGGGTACTGCGCGAGGGCGGCAAGGACAACCTGCTGGCGACCGTCAAACAATTGCAGGTGC
CCAAGGGCAATCTGTATGCGTGGGTGGCGACGGAAACGAAAGTCTCGCGGCAGATCCGCCGGGTGCTGCTCGATGAACAC
GGACTCGACGAGAAGTTCGTCAAAGCGGTCGGTTACTGGCGCGCCGAGGGCTCCGAAGAGGAGTGA

Upstream 100 bases:

>100_bases
GGAGCCCGGAAGAAATCCTGCGAGTGCGCGACCTGCTCAACGACACCGCCAAAGCCATCGTCGACGGCCCCGCCGTTCAA
TCTGCCCCGGAGAAAGCCGA

Downstream 100 bases:

>100_bases
ATACGCGCGGCGGCGCTGCTAAAGGCGCCGCCCCTGCCAGCGATCAATCCCGATCACCAGCAACGCCATCAGCACAAACC
CCAGCAGAATGCCCCCGGCA

Product: siderophore-interacting protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MTEVQTQGIHRVMHEIKRRRLEVLRVVDLTPRMRRITLGGPELAGFISLGTDDHVKLLFPQNAEQAAALETLVLGAGKSD
VPMPEMRDYTPRRYDLDKLELDIDFVLHGDGPASTWAEQARPGQFLHIGGPRGSMIVPDIFDSYLLIGDETALPAIARRL
EGLAANRKALVVIEVENGKEQQTLESAAQVNVIWVLREGGKDNLLATVKQLQVPKGNLYAWVATETKVSRQIRRVLLDEH
GLDEKFVKAVGYWRAEGSEEE

Sequences:

>Translated_261_residues
MTEVQTQGIHRVMHEIKRRRLEVLRVVDLTPRMRRITLGGPELAGFISLGTDDHVKLLFPQNAEQAAALETLVLGAGKSD
VPMPEMRDYTPRRYDLDKLELDIDFVLHGDGPASTWAEQARPGQFLHIGGPRGSMIVPDIFDSYLLIGDETALPAIARRL
EGLAANRKALVVIEVENGKEQQTLESAAQVNVIWVLREGGKDNLLATVKQLQVPKGNLYAWVATETKVSRQIRRVLLDEH
GLDEKFVKAVGYWRAEGSEEE
>Mature_260_residues
TEVQTQGIHRVMHEIKRRRLEVLRVVDLTPRMRRITLGGPELAGFISLGTDDHVKLLFPQNAEQAAALETLVLGAGKSDV
PMPEMRDYTPRRYDLDKLELDIDFVLHGDGPASTWAEQARPGQFLHIGGPRGSMIVPDIFDSYLLIGDETALPAIARRLE
GLAANRKALVVIEVENGKEQQTLESAAQVNVIWVLREGGKDNLLATVKQLQVPKGNLYAWVATETKVSRQIRRVLLDEHG
LDEKFVKAVGYWRAEGSEEE

Specific function: Unknown

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Vibrio vibriobactin/vulbinactin utilization protein viuB [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=250, Percent_Identity=36.4, Blast_Score=150, Evalue=1e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 29178; Mature: 29047

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEVQTQGIHRVMHEIKRRRLEVLRVVDLTPRMRRITLGGPELAGFISLGTDDHVKLLFP
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCEEEEEC
QNAEQAAALETLVLGAGKSDVPMPEMRDYTPRRYDLDKLELDIDFVLHGDGPASTWAEQA
CCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHC
RPGQFLHIGGPRGSMIVPDIFDSYLLIGDETALPAIARRLEGLAANRKALVVIEVENGKE
CCCCEEEECCCCCCEECHHHHCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEECCCCH
QQTLESAAQVNVIWVLREGGKDNLLATVKQLQVPKGNLYAWVATETKVSRQIRRVLLDEH
HHHHHHHHEEEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHCC
GLDEKFVKAVGYWRAEGSEEE
CCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TEVQTQGIHRVMHEIKRRRLEVLRVVDLTPRMRRITLGGPELAGFISLGTDDHVKLLFP
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCEEEEEC
QNAEQAAALETLVLGAGKSDVPMPEMRDYTPRRYDLDKLELDIDFVLHGDGPASTWAEQA
CCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHC
RPGQFLHIGGPRGSMIVPDIFDSYLLIGDETALPAIARRLEGLAANRKALVVIEVENGKE
CCCCEEEECCCCCCEECHHHHCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEECCCCH
QQTLESAAQVNVIWVLREGGKDNLLATVKQLQVPKGNLYAWVATETKVSRQIRRVLLDEH
HHHHHHHHEEEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHCC
GLDEKFVKAVGYWRAEGSEEE
CCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]