| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is gltK [H]
Identifier: 77460758
GI number: 77460758
Start: 5111991
End: 5112662
Strand: Direct
Name: gltK [H]
Synonym: Pfl01_4537
Alternate gene names: 77460758
Gene position: 5111991-5112662 (Clockwise)
Preceding gene: 77460757
Following gene: 77460759
Centisome position: 79.4
GC content: 61.16
Gene sequence:
>672_bases ATGGAATTCGATTTCAGTGGCATCGTTCCGGCCATTCCCGGCCTGTGGAACGGCATGCTGATGACCCTCAAGCTGATGGC GCTGGGCGTGGTCGGCGGGATCATCCTCGGCACCCTCCTCGCGCTGATGCGTCTGTCCCACAGCAAACTGCTGTCGAGCA TCGCCGGCGCGTACGTCAACTATTTCCGTTCGATCCCGCTGCTGCTGGTGATCACCTGGTTCTACCTGGCAGTGCCGTTC GTGCTGCGCTGGATTACCGGCGAAGACACCCCGATCGGTGCGTTCACCTCGTGCATCGTGGCCTTCATGATGTTCGAAGC GGCCTACTTCTGCGAAATCGTCCGGGCCGGCGTGCAGTCGATCCCGAAAGGCCAGATGGGCGCGGCGCAGGCACTGGGCA TGACCTACGGCCAGATGATGCGCCTGATCATCCTGCCCCAGGCGTTCCGCAAGATGACCCCGCTGCTGCTGCAGCAGAGC ATCATCCTGTTCCAGGACACCTCGCTGGTCTACACCGTGGGCCTGGTGGACTTCCTCAACGCCTCGCGCGCCAGTGGCGA CATCATTGGCCGCTCGAATGAGTTCCTGATCTTCGCAGGTCTCGTGTACTTCACCATCAGCTTTGCCGCCTCGGTGCTGG TCAAGCGTCTGCAAAAAAGGTTCGCCGTATGA
Upstream 100 bases:
>100_bases CCCTGATCTATTTCACCCTCAACATGAGCCTGATGCTGCTGATGCGCATGGTCGAGAAGAAAGTCGCCGTGCCCGGCCTG ATCTCCGTGGGGGGTAAATA
Downstream 100 bases:
>100_bases TCTCTATCAAGAACATCAACAAGTGGTATGGGGACTTCCAGGTGCTGACCGATTGCAGCACCGAGGTCAAAAAGGGTGAA GTGATCGTGGTCTGCGGTCC
Product: amino acid ABC transporter permease
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MEFDFSGIVPAIPGLWNGMLMTLKLMALGVVGGIILGTLLALMRLSHSKLLSSIAGAYVNYFRSIPLLLVITWFYLAVPF VLRWITGEDTPIGAFTSCIVAFMMFEAAYFCEIVRAGVQSIPKGQMGAAQALGMTYGQMMRLIILPQAFRKMTPLLLQQS IILFQDTSLVYTVGLVDFLNASRASGDIIGRSNEFLIFAGLVYFTISFAASVLVKRLQKRFAV
Sequences:
>Translated_223_residues MEFDFSGIVPAIPGLWNGMLMTLKLMALGVVGGIILGTLLALMRLSHSKLLSSIAGAYVNYFRSIPLLLVITWFYLAVPF VLRWITGEDTPIGAFTSCIVAFMMFEAAYFCEIVRAGVQSIPKGQMGAAQALGMTYGQMMRLIILPQAFRKMTPLLLQQS IILFQDTSLVYTVGLVDFLNASRASGDIIGRSNEFLIFAGLVYFTISFAASVLVKRLQKRFAV >Mature_223_residues MEFDFSGIVPAIPGLWNGMLMTLKLMALGVVGGIILGTLLALMRLSHSKLLSSIAGAYVNYFRSIPLLLVITWFYLAVPF VLRWITGEDTPIGAFTSCIVAFMMFEAAYFCEIVRAGVQSIPKGQMGAAQALGMTYGQMMRLIILPQAFRKMTPLLLQQS IILFQDTSLVYTVGLVDFLNASRASGDIIGRSNEFLIFAGLVYFTISFAASVLVKRLQKRFAV
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786873, Length=222, Percent_Identity=54.0540540540541, Blast_Score=223, Evalue=1e-59, Organism=Escherichia coli, GI87082239, Length=209, Percent_Identity=35.4066985645933, Blast_Score=128, Evalue=2e-31, Organism=Escherichia coli, GI1787030, Length=226, Percent_Identity=33.1858407079646, Blast_Score=118, Evalue=3e-28, Organism=Escherichia coli, GI1786874, Length=169, Percent_Identity=32.5443786982249, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1788226, Length=224, Percent_Identity=33.4821428571429, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788646, Length=227, Percent_Identity=26.8722466960352, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1788645, Length=222, Percent_Identity=31.0810810810811, Blast_Score=81, Evalue=7e-17, Organism=Escherichia coli, GI48994930, Length=135, Percent_Identity=30.3703703703704, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787087, Length=220, Percent_Identity=22.7272727272727, Blast_Score=68, Evalue=4e-13, Organism=Escherichia coli, GI1787086, Length=217, Percent_Identity=22.1198156682028, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24529; Mature: 24529
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFDFSGIVPAIPGLWNGMLMTLKLMALGVVGGIILGTLLALMRLSHSKLLSSIAGAYVN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFRSIPLLLVITWFYLAVPFVLRWITGEDTPIGAFTSCIVAFMMFEAAYFCEIVRAGVQS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPKGQMGAAQALGMTYGQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHH ASRASGDIIGRSNEFLIFAGLVYFTISFAASVLVKRLQKRFAV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEFDFSGIVPAIPGLWNGMLMTLKLMALGVVGGIILGTLLALMRLSHSKLLSSIAGAYVN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFRSIPLLLVITWFYLAVPFVLRWITGEDTPIGAFTSCIVAFMMFEAAYFCEIVRAGVQS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPKGQMGAAQALGMTYGQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHH ASRASGDIIGRSNEFLIFAGLVYFTISFAASVLVKRLQKRFAV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]