| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460701
Identifier: 77460701
GI number: 77460701
Start: 5052120
End: 5052968
Strand: Reverse
Name: 77460701
Synonym: Pfl01_4480
Alternate gene names: NA
Gene position: 5052968-5052120 (Counterclockwise)
Preceding gene: 77460702
Following gene: 77460698
Centisome position: 78.48
GC content: 60.19
Gene sequence:
>849_bases ATGGGGTTTGTGCACAAGCTGGCCTGGCTCGGCGCGGTGCTGCTGTTGAGTTTCGGTCAGGCCAACGCGGCCATTACGGA AAAAGACGACAGCAAGGCCGCCATCGCCTTGCTGGAAAAGGCTCTGGCCTATTACCACGACAACGGCGACAAGGCGTTCG CGGCGTTCAGCCGCCAGGGCGAATTCGTCGACAAGGACCGTTACGTGTTCGTGGTCGACACCAAGGGCGTGATGCTCGCC AGCGGCGGGCCGTCGTCGGCATTGATCGGGCGCGACGTCAGCGAAGTGCTCGGGCCGGACTTGCAGAAGTCCTTCAAGGA CGCCTTGAAAGTGCCGGAAGGCAACGGCATCCAGCAGGCCGAATACCGCTGGCAGAACTGGTCCGACGGCAAGGTCGAGC GCAAGCACGTTTACTATCAACGCATCGGTCAGCGGATTCTGGCGGTAGGTTATTACTTGCCGCGTGCGTCGGCGGAACAG GCGAAAGCGTTGCTCGACAAAGCGGCCACCGACCTGGCCAAAGACGAGAAGGGCACGCTGTCCGCGATCAACTCGCTCAA GGGCGGATACTTGCAGGATGACCTGTATGTGTTCGTGGTCAATCTCGACAACAAGCGCTACGTCGCCCACGGCACCAATC TGCGGTTGATCAACACCGATTTCGCCAAGGTCGATGACCCGGAAGGCAAACCGGTGGGCGAACCGATTCTGGCGCTGATT GGCAAACAGGATGAGGGCGAGTACGAGTACCGCTGGAAAAACCCGGTGACCGGCAAGGTCGAGGACAAGCATGCCTACCT GAAGAAGGTCGGGAACATGCTGGTGGCGGTCGGTTACTACAGTGCCTGA
Upstream 100 bases:
>100_bases ACACCCTCGCCACAGCAACATTCAGAAGCCATCTGAATATCCATACATGCCTTCAGGCCGTCTACGCTCTTGAAACACCA ACAAGAACGAGGGATGCGTC
Downstream 100 bases:
>100_bases TTCGTGAGCGCTCCCACGCAGCGCGTGGGAGCCATCGGCATCAATCAGCGGGCGCCGTGCTCACGGCCCCGCAGCAACCG GTTCGGCATCGCGATCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MGFVHKLAWLGAVLLLSFGQANAAITEKDDSKAAIALLEKALAYYHDNGDKAFAAFSRQGEFVDKDRYVFVVDTKGVMLA SGGPSSALIGRDVSEVLGPDLQKSFKDALKVPEGNGIQQAEYRWQNWSDGKVERKHVYYQRIGQRILAVGYYLPRASAEQ AKALLDKAATDLAKDEKGTLSAINSLKGGYLQDDLYVFVVNLDNKRYVAHGTNLRLINTDFAKVDDPEGKPVGEPILALI GKQDEGEYEYRWKNPVTGKVEDKHAYLKKVGNMLVAVGYYSA
Sequences:
>Translated_282_residues MGFVHKLAWLGAVLLLSFGQANAAITEKDDSKAAIALLEKALAYYHDNGDKAFAAFSRQGEFVDKDRYVFVVDTKGVMLA SGGPSSALIGRDVSEVLGPDLQKSFKDALKVPEGNGIQQAEYRWQNWSDGKVERKHVYYQRIGQRILAVGYYLPRASAEQ AKALLDKAATDLAKDEKGTLSAINSLKGGYLQDDLYVFVVNLDNKRYVAHGTNLRLINTDFAKVDDPEGKPVGEPILALI GKQDEGEYEYRWKNPVTGKVEDKHAYLKKVGNMLVAVGYYSA >Mature_281_residues GFVHKLAWLGAVLLLSFGQANAAITEKDDSKAAIALLEKALAYYHDNGDKAFAAFSRQGEFVDKDRYVFVVDTKGVMLAS GGPSSALIGRDVSEVLGPDLQKSFKDALKVPEGNGIQQAEYRWQNWSDGKVERKHVYYQRIGQRILAVGYYLPRASAEQA KALLDKAATDLAKDEKGTLSAINSLKGGYLQDDLYVFVVNLDNKRYVAHGTNLRLINTDFAKVDDPEGKPVGEPILALIG KQDEGEYEYRWKNPVTGKVEDKHAYLKKVGNMLVAVGYYSA
Specific function: Unknown
COG id: COG0840
COG function: function code NT; Methyl-accepting chemotaxis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31129; Mature: 30997
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFVHKLAWLGAVLLLSFGQANAAITEKDDSKAAIALLEKALAYYHDNGDKAFAAFSRQG CCHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHCCC EFVDKDRYVFVVDTKGVMLASGGPSSALIGRDVSEVLGPDLQKSFKDALKVPEGNGIQQA CEECCCCEEEEEECCCEEEECCCCCCCHHCCCHHHHHCHHHHHHHHHHHCCCCCCCCCHH EYRWQNWSDGKVERKHVYYQRIGQRILAVGYYLPRASAEQAKALLDKAATDLAKDEKGTL HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHH SAINSLKGGYLQDDLYVFVVNLDNKRYVAHGTNLRLINTDFAKVDDPEGKPVGEPILALI HHHHHCCCCCCCCCEEEEEEEECCCEEEEECCEEEEEECCCCCCCCCCCCCCCCHHHHHH GKQDEGEYEYRWKNPVTGKVEDKHAYLKKVGNMLVAVGYYSA CCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEECCC >Mature Secondary Structure GFVHKLAWLGAVLLLSFGQANAAITEKDDSKAAIALLEKALAYYHDNGDKAFAAFSRQG CHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHCCC EFVDKDRYVFVVDTKGVMLASGGPSSALIGRDVSEVLGPDLQKSFKDALKVPEGNGIQQA CEECCCCEEEEEECCCEEEECCCCCCCHHCCCHHHHHCHHHHHHHHHHHCCCCCCCCCHH EYRWQNWSDGKVERKHVYYQRIGQRILAVGYYLPRASAEQAKALLDKAATDLAKDEKGTL HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHH SAINSLKGGYLQDDLYVFVVNLDNKRYVAHGTNLRLINTDFAKVDDPEGKPVGEPILALI HHHHHCCCCCCCCCEEEEEEEECCCEEEEECCEEEEEECCCCCCCCCCCCCCCCHHHHHH GKQDEGEYEYRWKNPVTGKVEDKHAYLKKVGNMLVAVGYYSA CCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA