| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460563
Identifier: 77460563
GI number: 77460563
Start: 4895982
End: 4896443
Strand: Direct
Name: 77460563
Synonym: Pfl01_4342
Alternate gene names: NA
Gene position: 4895982-4896443 (Clockwise)
Preceding gene: 77460562
Following gene: 77460569
Centisome position: 76.04
GC content: 46.97
Gene sequence:
>462_bases ATGTCGCTCCGCCAGCAGCTCAGCCAAGAAAAGGAATTAAAAATGAACGTGGAAAACAACGCAGTTGGGCTGTTTGGTTT AAAAGTGAGCGAAAACGGTGGCCCGGAAGAAACCATCACCACTAATGAGCTCTTTTTCACCGTCACCTCAAAAAATCTAC GTGTCGGCGGTTTCCAAGTAGGTCCCAACGGGTTACGAGGTGCCCAAGTGGACATCTATGGTGAGATCAAAACTGGCACA TATCCCTTCACAAAGGACCTTAGCGTCACTGGTTTTTATAATCAAAGCGGATTGGTCAGCTCTTGGCCTGCAGTTACAAA GGGCGGGGAAATAACAATTCTGGAAGTAGACGTTACGAAAAAGTTTGCAAGAGGAACCTTCAAGTTCAGGGCAGAAGAGC GTGGCAACCCGTCCAATTATGCAAATGCCACTGGTAGCTTTTCCTTGACCGAAAAAGAGTGA
Upstream 100 bases:
>100_bases TTACCGCTAGTCGATTTCTTACTCCCGAGAGTCGATACCTGTAAGTTCTGACAGTTGTCCTCCCCATCAAAGCTGAAACA ACATCAACCGTGGAGGAGCA
Downstream 100 bases:
>100_bases TCGAGAAAATTTTGCCCCTCTATACAGAGGGGCAATTCCCAAGTCGCTACTCTAATCTCAACGTCTCATTGAACTGACTG ATCGCATCCACCACATGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MSLRQQLSQEKELKMNVENNAVGLFGLKVSENGGPEETITTNELFFTVTSKNLRVGGFQVGPNGLRGAQVDIYGEIKTGT YPFTKDLSVTGFYNQSGLVSSWPAVTKGGEITILEVDVTKKFARGTFKFRAEERGNPSNYANATGSFSLTEKE
Sequences:
>Translated_153_residues MSLRQQLSQEKELKMNVENNAVGLFGLKVSENGGPEETITTNELFFTVTSKNLRVGGFQVGPNGLRGAQVDIYGEIKTGT YPFTKDLSVTGFYNQSGLVSSWPAVTKGGEITILEVDVTKKFARGTFKFRAEERGNPSNYANATGSFSLTEKE >Mature_152_residues SLRQQLSQEKELKMNVENNAVGLFGLKVSENGGPEETITTNELFFTVTSKNLRVGGFQVGPNGLRGAQVDIYGEIKTGTY PFTKDLSVTGFYNQSGLVSSWPAVTKGGEITILEVDVTKKFARGTFKFRAEERGNPSNYANATGSFSLTEKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16713; Mature: 16582
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRQQLSQEKELKMNVENNAVGLFGLKVSENGGPEETITTNELFFTVTSKNLRVGGFQV CCHHHHHCCCCEEEEEECCCEEEEEEEEEECCCCCCCEEEECEEEEEEECCCEEECCEEE GPNGLRGAQVDIYGEIKTGTYPFTKDLSVTGFYNQSGLVSSWPAVTKGGEITILEVDVTK CCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCC KFARGTFKFRAEERGNPSNYANATGSFSLTEKE HHHCCEEEEEECCCCCCCCCCCCCCCEEEECCC >Mature Secondary Structure SLRQQLSQEKELKMNVENNAVGLFGLKVSENGGPEETITTNELFFTVTSKNLRVGGFQV CHHHHHCCCCEEEEEECCCEEEEEEEEEECCCCCCCEEEECEEEEEEECCCEEECCEEE GPNGLRGAQVDIYGEIKTGTYPFTKDLSVTGFYNQSGLVSSWPAVTKGGEITILEVDVTK CCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCC KFARGTFKFRAEERGNPSNYANATGSFSLTEKE HHHCCEEEEEECCCCCCCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA