| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77460562
Identifier: 77460562
GI number: 77460562
Start: 4895261
End: 4895827
Strand: Direct
Name: 77460562
Synonym: Pfl01_4341
Alternate gene names: NA
Gene position: 4895261-4895827 (Clockwise)
Preceding gene: 77460561
Following gene: 77460563
Centisome position: 76.03
GC content: 58.02
Gene sequence:
>567_bases ATGTTGGTCAGTGCAAAACAACAGCAAATCATTCACCTGCCCAAGCCGCTGAATGACGATGCAACCGCCACCGCTGCGGC CGGCCTGCAAGGCGGTCTGCATGGCGCAATGCTGCAGACCCTGCAAAACCAGGCCCAGGCGCAAACCGCCGAAGCCACCG CCAAAGTGCAGGAATCGGCTACCCAACTGGCGACCCAGCAAGTCAGCGAAGCCACGCGCATCAGCGACAACGTCGACGAA GCGTTCGCCAAGACCCGCGTCGCCCTGCAAACCTCCGATACTTCGCCGAGCAAATCCACAGGCTCATCGGCCCTGGATGA ATTCAAGGACTACATGAGCAAAACGCCGGAACAGCGTCTGCGCGACAGTATCCTGAAGGAAATGGGCCTGACCGAAGACG ACATCAAAGCGATGCCGCCGGAGAAACAACTGGCAATCGGCAAAGAGATCGCCGAGCGTCTACAGGACAAGATCAAGCTG GCCGAAGCCGAAAAACAAAACAAGCAAGACGCCAACTCGACGAAGATCAGCGACGAGTCGGCGGACAAGTTCCTCGCTTC GCTCTAA
Upstream 100 bases:
>100_bases TTCACCAAAAACCACAAGCCATTGAAATAAAAGAACTTATTAGATGGGCATGGTAATTGCTCCCTAGGACTGACAGTCAT TACCTACAGGTCCTTTCATC
Downstream 100 bases:
>100_bases GAAGATCCCTTCCCTCAGCAGAGTCTCACTCGAGACTCTGACCTCACCGTCCGGTTACCGCTAGTCGATTTCTTACTCCC GAGAGTCGATACCTGTAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MLVSAKQQQIIHLPKPLNDDATATAAAGLQGGLHGAMLQTLQNQAQAQTAEATAKVQESATQLATQQVSEATRISDNVDE AFAKTRVALQTSDTSPSKSTGSSALDEFKDYMSKTPEQRLRDSILKEMGLTEDDIKAMPPEKQLAIGKEIAERLQDKIKL AEAEKQNKQDANSTKISDESADKFLASL
Sequences:
>Translated_188_residues MLVSAKQQQIIHLPKPLNDDATATAAAGLQGGLHGAMLQTLQNQAQAQTAEATAKVQESATQLATQQVSEATRISDNVDE AFAKTRVALQTSDTSPSKSTGSSALDEFKDYMSKTPEQRLRDSILKEMGLTEDDIKAMPPEKQLAIGKEIAERLQDKIKL AEAEKQNKQDANSTKISDESADKFLASL >Mature_188_residues MLVSAKQQQIIHLPKPLNDDATATAAAGLQGGLHGAMLQTLQNQAQAQTAEATAKVQESATQLATQQVSEATRISDNVDE AFAKTRVALQTSDTSPSKSTGSSALDEFKDYMSKTPEQRLRDSILKEMGLTEDDIKAMPPEKQLAIGKEIAERLQDKIKL AEAEKQNKQDANSTKISDESADKFLASL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20299; Mature: 20299
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVSAKQQQIIHLPKPLNDDATATAAAGLQGGLHGAMLQTLQNQAQAQTAEATAKVQESA CCCCCCHHHHEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQLATQQVSEATRISDNVDEAFAKTRVALQTSDTSPSKSTGSSALDEFKDYMSKTPEQRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHH RDSILKEMGLTEDDIKAMPPEKQLAIGKEIAERLQDKIKLAEAEKQNKQDANSTKISDES HHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH ADKFLASL HHHHHHCC >Mature Secondary Structure MLVSAKQQQIIHLPKPLNDDATATAAAGLQGGLHGAMLQTLQNQAQAQTAEATAKVQESA CCCCCCHHHHEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQLATQQVSEATRISDNVDEAFAKTRVALQTSDTSPSKSTGSSALDEFKDYMSKTPEQRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHH RDSILKEMGLTEDDIKAMPPEKQLAIGKEIAERLQDKIKLAEAEKQNKQDANSTKISDES HHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH ADKFLASL HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA