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The map label for this gene is csrA2

Identifier: 77460494

GI number: 77460494

Start: 4821176

End: 4821364

Strand: Reverse

Name: csrA2

Synonym: Pfl01_4273

Alternate gene names: 77460494

Gene position: 4821364-4821176 (Counterclockwise)

Preceding gene: 77460495

Following gene: 77460492

Centisome position: 74.88

GC content: 50.79

Gene sequence:

>189_bases
ATGCTGATTCTGACTCGTCGGTGCGCAGAAAGCCTGATTATCGGTGATGGCGAAATCACCGTGACCGTGCTCGGCGTTAA
AGGAAATCAAGTGCGTATCGGCGTCAACGCCCCGAAAGAGGTGGCCGTGCACCGTGAAGAAATCTATCTGCGTATAAAGA
AAGAGAAGGACGAAGAACCAAGCCATTAA

Upstream 100 bases:

>100_bases
AATACTCAGGCATGTAGGGCTACGATCGCTCCGGTTGTAGGTCGGGTGCCTTTTTTTTGCAGACTGTTGTCCCTGAAATG
ATTCGCGTGAGGAGAAAGGT

Downstream 100 bases:

>100_bases
TTTTTATCGATTTTTATGTTTGCAAACGGGGAAGAAGGTGGTTAATATACGCCCCGTGTTGCGGAGAGCTGGCCGAGTGG
CCGAAGGCGCTCCCCTGCTA

Product: carbon storage regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MLILTRRCAESLIIGDGEITVTVLGVKGNQVRIGVNAPKEVAVHREEIYLRIKKEKDEEPSH

Sequences:

>Translated_62_residues
MLILTRRCAESLIIGDGEITVTVLGVKGNQVRIGVNAPKEVAVHREEIYLRIKKEKDEEPSH
>Mature_62_residues
MLILTRRCAESLIIGDGEITVTVLGVKGNQVRIGVNAPKEVAVHREEIYLRIKKEKDEEPSH

Specific function: Could accelerate the degradation of some genes transcripts potentially through selective RNA binding

COG id: COG1551

COG function: function code T; Carbon storage regulator (could also regulate swarming and quorum sensing)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsrA family

Homologues:

Organism=Escherichia coli, GI1789047, Length=62, Percent_Identity=75.8064516129032, Blast_Score=96, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CSRA2_PSESM (P69921)

Other databases:

- EMBL:   AE016853
- RefSeq:   NP_791668.1
- ProteinModelPortal:   P69921
- SMR:   P69921
- GeneID:   1183485
- GenomeReviews:   AE016853_GR
- KEGG:   pst:PSPTO_1844
- TIGR:   PSPTO_1844
- HOGENOM:   HBG724655
- OMA:   ISIHREE
- ProtClustDB:   PRK01712
- BioCyc:   PSYR223283:PSPTO_1844-MONOMER
- HAMAP:   MF_00167
- InterPro:   IPR003751
- ProDom:   PD009007
- TIGRFAMs:   TIGR00202

Pfam domain/function: PF02599 CsrA

EC number: NA

Molecular weight: Translated: 6953; Mature: 6953

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILTRRCAESLIIGDGEITVTVLGVKGNQVRIGVNAPKEVAVHREEIYLRIKKEKDEEP
CEEEECCCCCEEEECCCCEEEEEEECCCCEEEEECCCCHHHEEEEEEEEEEEECCCCCCC
SH
CC
>Mature Secondary Structure
MLILTRRCAESLIIGDGEITVTVLGVKGNQVRIGVNAPKEVAVHREEIYLRIKKEKDEEP
CEEEECCCCCEEEECCCCEEEEEEECCCCEEEEECCCCHHHEEEEEEEEEEEECCCCCCC
SH
CC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12928499