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The map label for this gene is flgC [H]

Identifier: 77460471

GI number: 77460471

Start: 4797884

End: 4798327

Strand: Reverse

Name: flgC [H]

Synonym: Pfl01_4250

Alternate gene names: 77460471

Gene position: 4798327-4797884 (Counterclockwise)

Preceding gene: 77460472

Following gene: 77460470

Centisome position: 74.53

GC content: 60.59

Gene sequence:

>444_bases
ATGTCCCTGTCCAGCGTTTTCAACATTGCCGGCAGCGGCATGAGCGCCCAGACCACCCGTCTCAACACCGTGGCCTCGAA
CATCGCCAACGCCGAGACCGTCTCGTCGAGCATCGACCAGACTTATCGCGCCCGTCACCCGGTGTTCGCCACCATGTTCC
AGGGCGGCCAGAGCGGCGGCAGCAATTCGCTGTTCCAGAACCAGGACGCAGCCGGTCAGGGCGTGCAGGTCATGGGTGTG
GTCGAAGACCAGAGCAACCTCGAAGCGCGCTACGAGCCGAATCATCCGGCGGCCGACGCCAAGGGCTACGTCTACTACCC
GAACGTCAATGTGGTGGAAGAAATGGCTGACATGATTTCCGCGAGCCGTTCGTTCCAGACCAACGCCGAAATGATGAACA
CCGCCAAAACCATGATGCAGAAAGTGCTGACCCTCGGTCAGTGA

Upstream 100 bases:

>100_bases
GTCGAACTACGCGGAAAACGCCGTCGGCTTCCAGGCCAGCTTCACCCTGCTCAACAGCAAATTCAAAGGGCTGGTGTCAG
CCCTGCGCGGAGAGTAATCC

Downstream 100 bases:

>100_bases
TAAGGGGCGACTGCCATGAGTGTTTCCGATACCACCAGCAGCCTGACGATGAAGGACATACTGGCCAACTCTTCGAAGAA
GACCAGTAGCACCACCACCG

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSLSSVFNIAGSGMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQGGQSGGSNSLFQNQDAAGQGVQVMGV
VEDQSNLEARYEPNHPAADAKGYVYYPNVNVVEEMADMISASRSFQTNAEMMNTAKTMMQKVLTLGQ

Sequences:

>Translated_147_residues
MSLSSVFNIAGSGMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQGGQSGGSNSLFQNQDAAGQGVQVMGV
VEDQSNLEARYEPNHPAADAKGYVYYPNVNVVEEMADMISASRSFQTNAEMMNTAKTMMQKVLTLGQ
>Mature_146_residues
SLSSVFNIAGSGMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQGGQSGGSNSLFQNQDAAGQGVQVMGVV
EDQSNLEARYEPNHPAADAKGYVYYPNVNVVEEMADMISASRSFQTNAEMMNTAKTMMQKVLTLGQ

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=147, Percent_Identity=47.6190476190476, Blast_Score=131, Evalue=2e-32,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 15757; Mature: 15626

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSSVFNIAGSGMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQGGQSGG
CCHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC
SNSLFQNQDAAGQGVQVMGVVEDQSNLEARYEPNHPAADAKGYVYYPNVNVVEEMADMIS
CCCCCCCCCCCCCCEEEEEEEECCCCCCEEECCCCCCCCCCCEEECCCCHHHHHHHHHHH
ASRSFQTNAEMMNTAKTMMQKVLTLGQ
HHCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLSSVFNIAGSGMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQGGQSGG
CHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC
SNSLFQNQDAAGQGVQVMGVVEDQSNLEARYEPNHPAADAKGYVYYPNVNVVEEMADMIS
CCCCCCCCCCCCCCEEEEEEEECCCCCCEEECCCCCCCCCCCEEECCCCHHHHHHHHHHH
ASRSFQTNAEMMNTAKTMMQKVLTLGQ
HHCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]