| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460420
Identifier: 77460420
GI number: 77460420
Start: 4739923
End: 4740771
Strand: Direct
Name: 77460420
Synonym: Pfl01_4199
Alternate gene names: NA
Gene position: 4739923-4740771 (Clockwise)
Preceding gene: 77460419
Following gene: 77460430
Centisome position: 73.62
GC content: 62.66
Gene sequence:
>849_bases ATGATCGGTAGCGTCAGCAACTACACGAGCTATACCAGCAGCACCTCCACCCAAAACGCCCGCAGCCAGCAACTGCAAAA GGAACTGTTCGCCAAACTCGACAGCAACGGCGACGGCGCGGTGGATCAGGACGAACTGGGCAGTGCCCTGTCACAAAAGT CCAATGACGGCCTGCTGGTCAGCCTGAGCAAACAATTCGGCGATCTGGACAGCGACGCCAGCGGCAGCCTCAGCGCCGAA GAAATGACCGCCATGGCCCCACCTCCACCGCCCCCAGGCGACCAGGCCCCCAACACCGAACTCGCCGACGCCCTGATCAG CGCCCTGGACGCCGACGGCGACGGCGCCATCAGCAGCGACGAACTGAGCAACGGCCTGACCAGCGCCGGCAGCACCGCCG ACAGCAGCAAAATCTTCTCGGCCCTGGACAAAAACGAAGACGGCGTCGTCAGCCAGGACGAACTCGCCGCCAGCCTCGCC CCACCACCCCCGCCCCCTCAAGCCACCAGCGACGAACTGTTCAGCCAGCTCGATGCCGACGGCGACGGCAGCGTCATCGC CACCGAGTTGAACAGTGCGTTGCAAGCCAGCGACAGCACCTCATCGAACAACACCGACAACGCCGCCGCCCTGCTCAAAG TGCTGGACAGCGACAGCAGCGCAGGCGTCAGCAGCGACGAACTGAAAGCTGCACTGCATGCAGGTCGTGAGCGCCCGGAT GACGAACGGACCGCCAGCAATACTCAAACCACTACCGAGGCGCTGAACCGGATGATTGCCAATCTGAGCAAGCAGTACTC GCTCGAAAACACTGCGTCGGTGGGCAAGTATTTGAATGTCGCGACTTGA
Upstream 100 bases:
>100_bases GTACCGGCCGGTACAAACCTCACATACCCACGACACCTTGCACCTTGAGGCTGCATAAGCCGGTACACCCACCGGTTTTC CAGTCCAAGGAGTGAGCCCG
Downstream 100 bases:
>100_bases GATTGGGTGAGGATTTGAGGGACGACTGAGGTTGGACGGGGTAAGTGGTTTGCTTTGACTTGGCGGTGTGTCAACAAAGC GCCCTCACCCTAACCCTCTC
Product: signal transduction protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MIGSVSNYTSYTSSTSTQNARSQQLQKELFAKLDSNGDGAVDQDELGSALSQKSNDGLLVSLSKQFGDLDSDASGSLSAE EMTAMAPPPPPPGDQAPNTELADALISALDADGDGAISSDELSNGLTSAGSTADSSKIFSALDKNEDGVVSQDELAASLA PPPPPPQATSDELFSQLDADGDGSVIATELNSALQASDSTSSNNTDNAAALLKVLDSDSSAGVSSDELKAALHAGRERPD DERTASNTQTTTEALNRMIANLSKQYSLENTASVGKYLNVAT
Sequences:
>Translated_282_residues MIGSVSNYTSYTSSTSTQNARSQQLQKELFAKLDSNGDGAVDQDELGSALSQKSNDGLLVSLSKQFGDLDSDASGSLSAE EMTAMAPPPPPPGDQAPNTELADALISALDADGDGAISSDELSNGLTSAGSTADSSKIFSALDKNEDGVVSQDELAASLA PPPPPPQATSDELFSQLDADGDGSVIATELNSALQASDSTSSNNTDNAAALLKVLDSDSSAGVSSDELKAALHAGRERPD DERTASNTQTTTEALNRMIANLSKQYSLENTASVGKYLNVAT >Mature_282_residues MIGSVSNYTSYTSSTSTQNARSQQLQKELFAKLDSNGDGAVDQDELGSALSQKSNDGLLVSLSKQFGDLDSDASGSLSAE EMTAMAPPPPPPGDQAPNTELADALISALDADGDGAISSDELSNGLTSAGSTADSSKIFSALDKNEDGVVSQDELAASLA PPPPPPQATSDELFSQLDADGDGSVIATELNSALQASDSTSSNNTDNAAALLKVLDSDSSAGVSSDELKAALHAGRERPD DERTASNTQTTTEALNRMIANLSKQYSLENTASVGKYLNVAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28912; Mature: 28912
Theoretical pI: Translated: 3.74; Mature: 3.74
Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGSVSNYTSYTSSTSTQNARSQQLQKELFAKLDSNGDGAVDQDELGSALSQKSNDGLLV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEE SLSKQFGDLDSDASGSLSAEEMTAMAPPPPPPGDQAPNTELADALISALDADGDGAISSD EEHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHH ELSNGLTSAGSTADSSKIFSALDKNEDGVVSQDELAASLAPPPPPPQATSDELFSQLDAD HHHHCHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHCCC GDGSVIATELNSALQASDSTSSNNTDNAAALLKVLDSDSSAGVSSDELKAALHAGRERPD CCCCEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC DERTASNTQTTTEALNRMIANLSKQYSLENTASVGKYLNVAT HHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC >Mature Secondary Structure MIGSVSNYTSYTSSTSTQNARSQQLQKELFAKLDSNGDGAVDQDELGSALSQKSNDGLLV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEE SLSKQFGDLDSDASGSLSAEEMTAMAPPPPPPGDQAPNTELADALISALDADGDGAISSD EEHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHH ELSNGLTSAGSTADSSKIFSALDKNEDGVVSQDELAASLAPPPPPPQATSDELFSQLDAD HHHHCHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHCCC GDGSVIATELNSALQASDSTSSNNTDNAAALLKVLDSDSSAGVSSDELKAALHAGRERPD CCCCEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC DERTASNTQTTTEALNRMIANLSKQYSLENTASVGKYLNVAT HHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA