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The map label for this gene is yceD [C]

Identifier: 77460382

GI number: 77460382

Start: 4697211

End: 4697738

Strand: Reverse

Name: yceD [C]

Synonym: Pfl01_4161

Alternate gene names: 77460382

Gene position: 4697738-4697211 (Counterclockwise)

Preceding gene: 77460384

Following gene: 77460381

Centisome position: 72.96

GC content: 54.55

Gene sequence:

>528_bases
ATGTTGAATGACCCGATTCCACCTCACGTTGACCCGCGCAAATTGGCTGACCGTGGCACCACCCTTCAAGGTGAACTGCT
GCTGGCCGATTTGAAGAGACTCTGCGACCCGCTTTCCGACGATGTCGGTACGGTGCAGGCCAAATTCGTTTTTGAACGAG
ATGAACGTAAATCTGTGGTGATCCACAGCTTTATCGACACCGAAGTCAAAATGGTTTGCCAGCGTTGTCTTGAGCTGGTC
ACCCTGCCGATCCACAGCGAATGCAGTTACGCTGTTGTGAAGGAGGGTGCGAATACCCAGTCGTTACCGAAAGGTTATGA
CGTGCTGGAACTGGGCGAAGATCCATTGGATCTGCAGTCACTGATCGAGGAGGAGCTTCTGCTCGCCTTGCCCATTGTGC
CTGCTCATCATCCGGAAGAATGCCAGCAGCCGGCGGGAGCAGATGAGCCCGAACCGAGCGAGGACGAGGTAACGCGGTCC
AACCCGTTCAGTGTATTGGCGCAGTTAAAGCGTGACCCAAACGTTTAG

Upstream 100 bases:

>100_bases
CTCCAGAGGCAGGCGACAGATTCTAGCGGAGCCGCGCAAGTGACGGACAGGGCACAATTTCCTTTGACATGGGTGGGTGC
ATCCCTATAATGCTGCGCCT

Downstream 100 bases:

>100_bases
GAGTTAATCAATTATGGCTGTTCAGCAGAACAAAAAATCCCGCTCTGCCCGTGACATGCGCCGTTCGCACGACGCTCTCG
AGGCTAGCACCCTGTCTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MLNDPIPPHVDPRKLADRGTTLQGELLLADLKRLCDPLSDDVGTVQAKFVFERDERKSVVIHSFIDTEVKMVCQRCLELV
TLPIHSECSYAVVKEGANTQSLPKGYDVLELGEDPLDLQSLIEEELLLALPIVPAHHPEECQQPAGADEPEPSEDEVTRS
NPFSVLAQLKRDPNV

Sequences:

>Translated_175_residues
MLNDPIPPHVDPRKLADRGTTLQGELLLADLKRLCDPLSDDVGTVQAKFVFERDERKSVVIHSFIDTEVKMVCQRCLELV
TLPIHSECSYAVVKEGANTQSLPKGYDVLELGEDPLDLQSLIEEELLLALPIVPAHHPEECQQPAGADEPEPSEDEVTRS
NPFSVLAQLKRDPNV
>Mature_175_residues
MLNDPIPPHVDPRKLADRGTTLQGELLLADLKRLCDPLSDDVGTVQAKFVFERDERKSVVIHSFIDTEVKMVCQRCLELV
TLPIHSECSYAVVKEGANTQSLPKGYDVLELGEDPLDLQSLIEEELLLALPIVPAHHPEECQQPAGADEPEPSEDEVTRS
NPFSVLAQLKRDPNV

Specific function: Unknown

COG id: COG1399

COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yceD [H]

Homologues:

Organism=Escherichia coli, GI1787329, Length=167, Percent_Identity=27.5449101796407, Blast_Score=76, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003772 [H]

Pfam domain/function: PF02620 DUF177 [H]

EC number: NA

Molecular weight: Translated: 19427; Mature: 19427

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNDPIPPHVDPRKLADRGTTLQGELLLADLKRLCDPLSDDVGTVQAKFVFERDERKSVV
CCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHCEEHHEEEECCCCCCEE
IHSFIDTEVKMVCQRCLELVTLPIHSECSYAVVKEGANTQSLPKGYDVLELGEDPLDLQS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCHHHCCCCCHHHHH
LIEEELLLALPIVPAHHPEECQQPAGADEPEPSEDEVTRSNPFSVLAQLKRDPNV
HHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MLNDPIPPHVDPRKLADRGTTLQGELLLADLKRLCDPLSDDVGTVQAKFVFERDERKSVV
CCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHCEEHHEEEECCCCCCEE
IHSFIDTEVKMVCQRCLELVTLPIHSECSYAVVKEGANTQSLPKGYDVLELGEDPLDLQS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCHHHCCCCCHHHHH
LIEEELLLALPIVPAHHPEECQQPAGADEPEPSEDEVTRSNPFSVLAQLKRDPNV
HHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]