Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is yxlA [H]

Identifier: 77460357

GI number: 77460357

Start: 4673957

End: 4675423

Strand: Reverse

Name: yxlA [H]

Synonym: Pfl01_4136

Alternate gene names: 77460357

Gene position: 4675423-4673957 (Counterclockwise)

Preceding gene: 77460358

Following gene: 77460356

Centisome position: 72.62

GC content: 63.39

Gene sequence:

>1467_bases
ATGAGTTCATCGAACACCGGGCAAAGCGCCGGGCAACTGGAAACCCGGGGCATCGAACCGGTGCCGGAAGGCGAGTGCAA
CGGCCATCCGCTGCAACTGTTCTGGGTCTGGTTCGCTGCCAACATTTCCATCCTCGGCCTGCCGCTGGGCGCCACGCTGG
TTGCGTTTCGCGGCCTGGCGATCTGGCAGGCAATCATCGTCGCGATCCTCGGCGCTGCCGGTTCGTTCGCGGTGGTGGGG
ATCATCTCGATTGCCGGCCGTCGCGGTCGTGCGCCGAGCCTGACTTTGTCGCGGGCGATCTTTGGTGTGCGCGGCAATAT
CGGCCCGACGCTGGTGTCGCTGATGTCGCGCCTGGGCTGGGAAACCGTCAACACCACCACCGCCGCGTTCGTGCTGCTGT
CGTTGTGCTCGATCCTGTTCGGCTCGCCGGTGGAAGCCAAAAGCGCGCCGGTGCTGACCCTGATTTTCATCGCGATTTTC
GTGCTGCTGACCCTGTCGGTGTCCGGCCTCGGCCACGCCACCTTGCTGGTGATCCAGAAGTGGGCGACCTACGTGTTCGG
CGCCCTGAACATTCTGGTCGGCGGCTTCCTCTGCGCGACCATCGACTGGAGCGCGGTGTTCAACGCCACGCCGGCACCAA
TGAGCGCGATGATCATCGGTATCGGCACCATGGCCGCCGGCACCGGGATCGGCTGGGCCAACGCTGGTGCCGACATGTCG
CGCTATCAGCATCACAGTGTCAAAGCCGTGCGCTTGGTGGCTTCGGCGGCGTTCGGTGCGGGGATTCCGCTGGTGTTGCT
GATCACCCTCGGCGGCCTGCTGTCGGTGGGCAACAACGATCTGGCGTCGGCGACTGATCCGATCGTGGCGATCCGCGACA
TGCTGCCGACCTGGATGGCCGTGCCGTACCTGATCACCGCATTCGGTGGTCTGCTGCTGTCGAACAACCTTTCGGTGTAC
TCCGCCGGTCTGACCACGCTGACCCTCGGCCTGAAGGTCAAGCGCGTGTACGCGGTAGTGGTCGACATCGTTGCAATCTT
CGCCGGTTCGATCTACTTCATGCTGATCGCCGACAGCTTCTACGGCCCGTTCATTACCTTCATTTCCCTGCTGGCGGTGC
CGATCACCGCGTGGGTCGGGATCTTCGTGGTCGACCTGATTCACCGTCACTACTACAGCCCGAAAGACCTGCTCGACGTC
AGCCCGAGCAGCGCCTACTGGTACAGCGGTGGCATCGAATGGCGCGCATTCGGCGCCTGGGCGATTGCGATCGTGCTGGG
CTTCAGTTTCACCACCATCGGCACCACGGCTGAAAACGTCTGGTTCAAGGGCTTCCTGTCCGACTCGTGGCTGGGCCACA
ACGGCCTCGGCTGGATCGTGACGTTTGTGGTCGCTGGCGGCATTTACTTCGTACTCGGCGGGGCGAGAGATCGCCGCGCT
GCGCAATCCGAGAATGCTCATGCCTAA

Upstream 100 bases:

>100_bases
CCCGCAATGGATCGCGCAGACAGGCCCAGGAAGGGGCGGGATGTCTTGTCGTTCTGCGTCATTGCCACAACCACAATAAA
GGCAAACAGGAGCATTTTTC

Downstream 100 bases:

>100_bases
GATGTTGCACACCGGCCAGGTCATCATTGACCTGGTCATGGCCGTGGATGCGCTGCCGCAAATTGGCGGTGACGTGCTGG
CGCAGTCCGCCAGTTTCGAA

Product: cytosine/purines, uracil, thiamine, allantoin permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 488; Mature: 487

Protein sequence:

>488_residues
MSSSNTGQSAGQLETRGIEPVPEGECNGHPLQLFWVWFAANISILGLPLGATLVAFRGLAIWQAIIVAILGAAGSFAVVG
IISIAGRRGRAPSLTLSRAIFGVRGNIGPTLVSLMSRLGWETVNTTTAAFVLLSLCSILFGSPVEAKSAPVLTLIFIAIF
VLLTLSVSGLGHATLLVIQKWATYVFGALNILVGGFLCATIDWSAVFNATPAPMSAMIIGIGTMAAGTGIGWANAGADMS
RYQHHSVKAVRLVASAAFGAGIPLVLLITLGGLLSVGNNDLASATDPIVAIRDMLPTWMAVPYLITAFGGLLLSNNLSVY
SAGLTTLTLGLKVKRVYAVVVDIVAIFAGSIYFMLIADSFYGPFITFISLLAVPITAWVGIFVVDLIHRHYYSPKDLLDV
SPSSAYWYSGGIEWRAFGAWAIAIVLGFSFTTIGTTAENVWFKGFLSDSWLGHNGLGWIVTFVVAGGIYFVLGGARDRRA
AQSENAHA

Sequences:

>Translated_488_residues
MSSSNTGQSAGQLETRGIEPVPEGECNGHPLQLFWVWFAANISILGLPLGATLVAFRGLAIWQAIIVAILGAAGSFAVVG
IISIAGRRGRAPSLTLSRAIFGVRGNIGPTLVSLMSRLGWETVNTTTAAFVLLSLCSILFGSPVEAKSAPVLTLIFIAIF
VLLTLSVSGLGHATLLVIQKWATYVFGALNILVGGFLCATIDWSAVFNATPAPMSAMIIGIGTMAAGTGIGWANAGADMS
RYQHHSVKAVRLVASAAFGAGIPLVLLITLGGLLSVGNNDLASATDPIVAIRDMLPTWMAVPYLITAFGGLLLSNNLSVY
SAGLTTLTLGLKVKRVYAVVVDIVAIFAGSIYFMLIADSFYGPFITFISLLAVPITAWVGIFVVDLIHRHYYSPKDLLDV
SPSSAYWYSGGIEWRAFGAWAIAIVLGFSFTTIGTTAENVWFKGFLSDSWLGHNGLGWIVTFVVAGGIYFVLGGARDRRA
AQSENAHA
>Mature_487_residues
SSSNTGQSAGQLETRGIEPVPEGECNGHPLQLFWVWFAANISILGLPLGATLVAFRGLAIWQAIIVAILGAAGSFAVVGI
ISIAGRRGRAPSLTLSRAIFGVRGNIGPTLVSLMSRLGWETVNTTTAAFVLLSLCSILFGSPVEAKSAPVLTLIFIAIFV
LLTLSVSGLGHATLLVIQKWATYVFGALNILVGGFLCATIDWSAVFNATPAPMSAMIIGIGTMAAGTGIGWANAGADMSR
YQHHSVKAVRLVASAAFGAGIPLVLLITLGGLLSVGNNDLASATDPIVAIRDMLPTWMAVPYLITAFGGLLLSNNLSVYS
AGLTTLTLGLKVKRVYAVVVDIVAIFAGSIYFMLIADSFYGPFITFISLLAVPITAWVGIFVVDLIHRHYYSPKDLLDVS
PSSAYWYSGGIEWRAFGAWAIAIVLGFSFTTIGTTAENVWFKGFLSDSWLGHNGLGWIVTFVVAGGIYFVLGGARDRRAA
QSENAHA

Specific function: Unknown

COG id: COG1457

COG function: function code F; Purine-cytosine permease and related proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the purine-cytosine permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001248 [H]

Pfam domain/function: PF02133 Transp_cyt_pur [H]

EC number: NA

Molecular weight: Translated: 51422; Mature: 51290

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSNTGQSAGQLETRGIEPVPEGECNGHPLQLFWVWFAANISILGLPLGATLVAFRGLA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEHHCCCEEEEECHHHHHHHHHHHH
IWQAIIVAILGAAGSFAVVGIISIAGRRGRAPSLTLSRAIFGVRGNIGPTLVSLMSRLGW
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCC
ETVNTTTAAFVLLSLCSILFGSPVEAKSAPVLTLIFIAIFVLLTLSVSGLGHATLLVIQK
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
WATYVFGALNILVGGFLCATIDWSAVFNATPAPMSAMIIGIGTMAAGTGIGWANAGADMS
HHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHEEHHHHHCCCCCCCCCCCCHHH
RYQHHSVKAVRLVASAAFGAGIPLVLLITLGGLLSVGNNDLASATDPIVAIRDMLPTWMA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
VPYLITAFGGLLLSNNLSVYSAGLTTLTLGLKVKRVYAVVVDIVAIFAGSIYFMLIADSF
HHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGPFITFISLLAVPITAWVGIFVVDLIHRHYYSPKDLLDVSPSSAYWYSGGIEWRAFGAW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEECCCCEEEEHHHH
AIAIVLGFSFTTIGTTAENVWFKGFLSDSWLGHNGLGWIVTFVVAGGIYFVLGGARDRRA
HHHHHHHHHHHCCCCCHHHHEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH
AQSENAHA
HCCCCCCC
>Mature Secondary Structure 
SSSNTGQSAGQLETRGIEPVPEGECNGHPLQLFWVWFAANISILGLPLGATLVAFRGLA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEHHCCCEEEEECHHHHHHHHHHHH
IWQAIIVAILGAAGSFAVVGIISIAGRRGRAPSLTLSRAIFGVRGNIGPTLVSLMSRLGW
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCC
ETVNTTTAAFVLLSLCSILFGSPVEAKSAPVLTLIFIAIFVLLTLSVSGLGHATLLVIQK
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
WATYVFGALNILVGGFLCATIDWSAVFNATPAPMSAMIIGIGTMAAGTGIGWANAGADMS
HHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHEEHHHHHCCCCCCCCCCCCHHH
RYQHHSVKAVRLVASAAFGAGIPLVLLITLGGLLSVGNNDLASATDPIVAIRDMLPTWMA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
VPYLITAFGGLLLSNNLSVYSAGLTTLTLGLKVKRVYAVVVDIVAIFAGSIYFMLIADSF
HHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGPFITFISLLAVPITAWVGIFVVDLIHRHYYSPKDLLDVSPSSAYWYSGGIEWRAFGAW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEECCCCEEEEHHHH
AIAIVLGFSFTTIGTTAENVWFKGFLSDSWLGHNGLGWIVTFVVAGGIYFVLGGARDRRA
HHHHHHHHHHHCCCCCHHHHEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH
AQSENAHA
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]