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The map label for this gene is dgoA [H]

Identifier: 77460345

GI number: 77460345

Start: 4666405

End: 4667025

Strand: Reverse

Name: dgoA [H]

Synonym: Pfl01_4124

Alternate gene names: 77460345

Gene position: 4667025-4666405 (Counterclockwise)

Preceding gene: 77460346

Following gene: 77460344

Centisome position: 72.49

GC content: 64.25

Gene sequence:

>621_bases
ATGCTCAAGCAAGCACTGGCGCAAAACGGTCTGATCGCGATTCTGCGCGGCCTGCATCCGCAGGAAGCCGCCGCTGTCGG
AGAAGTCCTGTATGCGGCCGGATTTCGCGTCATCGAAGTACCGCTCAATTCCCCCTCGCCGTACGAAAGCATCCGTATTC
TGCGTAAGGCCTTGCCCGCCGATTGTCTGATCGGTGCCGGCACGGTGCTGACCCCGGAACAGGTCGAATTGGTGAAGGAG
GCCGGCGGCCAGGTGATCGTCATGCCCCACAGCGATGCCAAGGTGCTGCGGGCGGCGAAAGCGGCGGGGCTGTACCTGTC
GCCGGGCGTTGCCACACCGACCGAAGCCTTTGCGGCACTGGAGGAGGGTGCTGACATTCTCAAGCTGTTCCCGGCCGAAC
AGATGGGCCCGGCGGTGGTGAAAGCCTGGCTGGCGGTGTTGCCCGTCGGGACGATCCTGGCGCCGGTCGGTGGCATCACG
CCGGACAACATGCAGGCGTTCATCGACGCCGGCGTCAAAGGCTTTGGCCTCGGTTCCGGGCTGTTCAAGCCGGGCATGAC
GACTGAGCAAGTGGCGACCAATGCCAAGGCCTACGTGGCGGCCTGGAAAGCCCTTCGCTAA

Upstream 100 bases:

>100_bases
ACCCTGGCCGAGCAAGCCACCGAGCGTGGACTGTGGCAACTGGCGCTCGCCGCCGGACTGATCGATTCCTCATCCCGTTA
ACCCTGACTGGAGGCCTGAC

Downstream 100 bases:

>100_bases
GACTTTTCCGGCGCTGCGTGCGCTGCATCTAACAAGAGAGACAAGCAGATGAAAATCACCAAACTCACCACCTTCATCGT
CCCGCCGCGCTGGTGCTTCC

Product: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase

Products: NA

Alternate protein names: 2-oxo-3-deoxygalactonate 6-phosphate aldolase; 6-phospho-2-dehydro-3-deoxygalactonate aldolase [H]

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MLKQALAQNGLIAILRGLHPQEAAAVGEVLYAAGFRVIEVPLNSPSPYESIRILRKALPADCLIGAGTVLTPEQVELVKE
AGGQVIVMPHSDAKVLRAAKAAGLYLSPGVATPTEAFAALEEGADILKLFPAEQMGPAVVKAWLAVLPVGTILAPVGGIT
PDNMQAFIDAGVKGFGLGSGLFKPGMTTEQVATNAKAYVAAWKALR

Sequences:

>Translated_206_residues
MLKQALAQNGLIAILRGLHPQEAAAVGEVLYAAGFRVIEVPLNSPSPYESIRILRKALPADCLIGAGTVLTPEQVELVKE
AGGQVIVMPHSDAKVLRAAKAAGLYLSPGVATPTEAFAALEEGADILKLFPAEQMGPAVVKAWLAVLPVGTILAPVGGIT
PDNMQAFIDAGVKGFGLGSGLFKPGMTTEQVATNAKAYVAAWKALR
>Mature_206_residues
MLKQALAQNGLIAILRGLHPQEAAAVGEVLYAAGFRVIEVPLNSPSPYESIRILRKALPADCLIGAGTVLTPEQVELVKE
AGGQVIVMPHSDAKVLRAAKAAGLYLSPGVATPTEAFAALEEGADILKLFPAEQMGPAVVKAWLAVLPVGTILAPVGGIT
PDNMQAFIDAGVKGFGLGSGLFKPGMTTEQVATNAKAYVAAWKALR

Specific function: D-galactonate degradation; first step. D-galactonate degradation; third step. [C]

COG id: COG0800

COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994954, Length=194, Percent_Identity=48.9690721649485, Blast_Score=167, Evalue=5e-43,
Organism=Escherichia coli, GI1788156, Length=150, Percent_Identity=35.3333333333333, Blast_Score=80, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000887
- InterPro:   IPR013785 [H]

Pfam domain/function: PF01081 Aldolase [H]

EC number: =4.1.2.21 [H]

Molecular weight: Translated: 21332; Mature: 21332

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS00160 ALDOLASE_KDPG_KHG_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKQALAQNGLIAILRGLHPQEAAAVGEVLYAAGFRVIEVPLNSPSPYESIRILRKALPA
CCHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCH
DCLIGAGTVLTPEQVELVKEAGGQVIVMPHSDAKVLRAAKAAGLYLSPGVATPTEAFAAL
HHEECCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCEEECCCCCCHHHHHHHH
EEGADILKLFPAEQMGPAVVKAWLAVLPVGTILAPVGGITPDNMQAFIDAGVKGFGLGSG
HCCCHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC
LFKPGMTTEQVATNAKAYVAAWKALR
CCCCCCCHHHHHHCHHHHHHHHHHCC
>Mature Secondary Structure
MLKQALAQNGLIAILRGLHPQEAAAVGEVLYAAGFRVIEVPLNSPSPYESIRILRKALPA
CCHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCH
DCLIGAGTVLTPEQVELVKEAGGQVIVMPHSDAKVLRAAKAAGLYLSPGVATPTEAFAAL
HHEECCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCEEECCCCCCHHHHHHHH
EEGADILKLFPAEQMGPAVVKAWLAVLPVGTILAPVGGITPDNMQAFIDAGVKGFGLGSG
HCCCHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC
LFKPGMTTEQVATNAKAYVAAWKALR
CCCCCCCHHHHHHCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]