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The map label for this gene is ydiS [C]

Identifier: 77460339

GI number: 77460339

Start: 4659066

End: 4660730

Strand: Direct

Name: ydiS [C]

Synonym: Pfl01_4118

Alternate gene names: 77460339

Gene position: 4659066-4660730 (Clockwise)

Preceding gene: 77460328

Following gene: 77460341

Centisome position: 72.36

GC content: 60.24

Gene sequence:

>1665_bases
GTGGAACGCGAATACATGGAATTCGACGTGGTCATCGTCGGTGCCGGCCCCGCTGGCCTGTCCGCCGCCTGCCGTCTGAA
GCAGAAGGCCGCCGAAGCCGGTAAGGAAATCAGCGTCTGCGTGGTCGAAAAAGGCTCCGAAGTCGGCGCACACATCCTGT
CCGGTGCCGTATTCGAACCACGGGCCCTGAACGAACTGTTCCCGGACTGGAAAGAACTCGGCGCCCCGCTGAACACGCCA
GTCACCCGCGATGACATCTTCGTGCTGAAAAACGCCGAAAGCGCGCAAAAAATTCCTGACTTCTTTGTGCCCAAGACCAT
GCACAACGAAGGCAACTACATTATCTCCCTCGGCAACCTGTGCCGCTGGCTCGCTCAGCAGGCCGAAAACCTGGGCGTGG
AAATCTACCCGGGCTTCGCCGCTCAGGAAGCGCTGATCGATGAAAACGGCGTGGTGCGCGGGATCATCACCGGCGACCTC
GGCGTCGACCGCGAAGGCCATCCGAAAGAAGGCCTGTACACCCCGGGCATGGAACTGCGTGGCAAGTACACGCTGTTCGC
CGAAGGTTGCCGTGGCCACATCGGCAAGCAACTGATCAAGCGCTATAACCTGGACAGCGATGCCGACGCCCAGCACTACG
GCATCGGGCTGAAGGAAATCTGGGAAATCGACCCGGCCAAACACCAGCCAGGCCTGGTGGTGCACACCGCCGGTTGGCCG
ATGGACATCATGGGCACCGAGAACACCGGCGGCTCCTTCCTCTATCACCTGGAAAACAACCAGGTGGTGGTCGGTCTGAT
CGTCGACCTTTCCTACAGCAACACCTACCTGTCGCCGTTCGACGAATTCCAGCGCCTCAAGCATCACCCGGTACTCAAGC
AGTATCTGGAAGGCGGCAAGCGCATCAGCTACGGCGCACGTGCGATCTGCAAGGGTGGCCTGAACTCACTGCCGAAAATG
GTCTTCAAGGGCGGCGCACTGATCGGTTGCGACCTCGGCACTCTGAACTTCGCCAAGATCAAAGGCAGCCACACCGCGAT
GAAGTCCGGCATGCTCGCCGCTGAATCCGTGGCCGACGCGCTGTTCGCTGAAAAGGACGGCACGGAAGAGCTGACCACCT
ACGTCGACGCCTTCAAGAAGAGCTGGCTCTACGAAGAACTGTTCGCCAGCCGCAACTTCGGCCCGGCGATCCACAAGTTC
GGCGCTATCGTCGGCGGCGGTTTCAACTGGCTGGACCAGAACATCTTCGGCGGCAAACTGCCGTTCACCCTGCACGACAC
CAAGCCGGACTACGCCTGCCTCAAGCTCGCGGCCGACTGCAAGAAGATCGACTACCCGAAACCCGACGGCAAGATCAGCT
TCGACAAGCTGAGCTCGGTGTTCATCTCCGGTACCAACCATGAAGAAGAACAGCCGTGCCACCTGAAACTGACCGATCCG
ACCATCCCGCTGAGCAAGAACCTGCCGCTGTACGACGAGCCGGCGCAGCGCTACTGCCCGGCCGGCGTGTATGAAGTGAT
CACCAAGGAAGACGGCGAGAAGCGCTTCCAGATCAACGCCCAGAACTGCGTGCACTGCAAGACCTGTGACATCAAGGATC
CTTCGCAGAACATCACCTGGGTGACGCCGGAAGGCGCTGGCGGTCCGACCTATCCAAACATGTAA

Upstream 100 bases:

>100_bases
CCATTATTACCCTTGACGTTAACGTAAAGGCAATAACGGATACGACACCGAACCTCCAAATTAGAAAAAAAACTGTTGAG
CCTTGAGTAGGAGATAGCCT

Downstream 100 bases:

>100_bases
GTCGAATTGCTGAACATCAAGGCTCCCGAAACGGGGGCCTTTTTGTTCCCCGCGATTTGGTGAAAATCACGCAGCACGCT
CATCCCCCGGACTGCGTTCG

Product: electron transfer flavoprotein-ubiquinone oxidoreductase

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MEREYMEFDVVIVGAGPAGLSAACRLKQKAAEAGKEISVCVVEKGSEVGAHILSGAVFEPRALNELFPDWKELGAPLNTP
VTRDDIFVLKNAESAQKIPDFFVPKTMHNEGNYIISLGNLCRWLAQQAENLGVEIYPGFAAQEALIDENGVVRGIITGDL
GVDREGHPKEGLYTPGMELRGKYTLFAEGCRGHIGKQLIKRYNLDSDADAQHYGIGLKEIWEIDPAKHQPGLVVHTAGWP
MDIMGTENTGGSFLYHLENNQVVVGLIVDLSYSNTYLSPFDEFQRLKHHPVLKQYLEGGKRISYGARAICKGGLNSLPKM
VFKGGALIGCDLGTLNFAKIKGSHTAMKSGMLAAESVADALFAEKDGTEELTTYVDAFKKSWLYEELFASRNFGPAIHKF
GAIVGGGFNWLDQNIFGGKLPFTLHDTKPDYACLKLAADCKKIDYPKPDGKISFDKLSSVFISGTNHEEEQPCHLKLTDP
TIPLSKNLPLYDEPAQRYCPAGVYEVITKEDGEKRFQINAQNCVHCKTCDIKDPSQNITWVTPEGAGGPTYPNM

Sequences:

>Translated_554_residues
MEREYMEFDVVIVGAGPAGLSAACRLKQKAAEAGKEISVCVVEKGSEVGAHILSGAVFEPRALNELFPDWKELGAPLNTP
VTRDDIFVLKNAESAQKIPDFFVPKTMHNEGNYIISLGNLCRWLAQQAENLGVEIYPGFAAQEALIDENGVVRGIITGDL
GVDREGHPKEGLYTPGMELRGKYTLFAEGCRGHIGKQLIKRYNLDSDADAQHYGIGLKEIWEIDPAKHQPGLVVHTAGWP
MDIMGTENTGGSFLYHLENNQVVVGLIVDLSYSNTYLSPFDEFQRLKHHPVLKQYLEGGKRISYGARAICKGGLNSLPKM
VFKGGALIGCDLGTLNFAKIKGSHTAMKSGMLAAESVADALFAEKDGTEELTTYVDAFKKSWLYEELFASRNFGPAIHKF
GAIVGGGFNWLDQNIFGGKLPFTLHDTKPDYACLKLAADCKKIDYPKPDGKISFDKLSSVFISGTNHEEEQPCHLKLTDP
TIPLSKNLPLYDEPAQRYCPAGVYEVITKEDGEKRFQINAQNCVHCKTCDIKDPSQNITWVTPEGAGGPTYPNM
>Mature_554_residues
MEREYMEFDVVIVGAGPAGLSAACRLKQKAAEAGKEISVCVVEKGSEVGAHILSGAVFEPRALNELFPDWKELGAPLNTP
VTRDDIFVLKNAESAQKIPDFFVPKTMHNEGNYIISLGNLCRWLAQQAENLGVEIYPGFAAQEALIDENGVVRGIITGDL
GVDREGHPKEGLYTPGMELRGKYTLFAEGCRGHIGKQLIKRYNLDSDADAQHYGIGLKEIWEIDPAKHQPGLVVHTAGWP
MDIMGTENTGGSFLYHLENNQVVVGLIVDLSYSNTYLSPFDEFQRLKHHPVLKQYLEGGKRISYGARAICKGGLNSLPKM
VFKGGALIGCDLGTLNFAKIKGSHTAMKSGMLAAESVADALFAEKDGTEELTTYVDAFKKSWLYEELFASRNFGPAIHKF
GAIVGGGFNWLDQNIFGGKLPFTLHDTKPDYACLKLAADCKKIDYPKPDGKISFDKLSSVFISGTNHEEEQPCHLKLTDP
TIPLSKNLPLYDEPAQRYCPAGVYEVITKEDGEKRFQINAQNCVHCKTCDIKDPSQNITWVTPEGAGGPTYPNM

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=567, Percent_Identity=54.8500881834215, Blast_Score=603, Evalue=1e-172,
Organism=Escherichia coli, GI1787991, Length=332, Percent_Identity=26.8072289156627, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI87082155, Length=347, Percent_Identity=26.5129682997118, Blast_Score=86, Evalue=8e-18,
Organism=Escherichia coli, GI1786227, Length=378, Percent_Identity=24.8677248677249, Blast_Score=82, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI25144720, Length=563, Percent_Identity=50.7992895204263, Blast_Score=557, Evalue=1e-159,
Organism=Saccharomyces cerevisiae, GI6324932, Length=579, Percent_Identity=43.6960276338515, Blast_Score=459, Evalue=1e-130,
Organism=Drosophila melanogaster, GI24652256, Length=564, Percent_Identity=54.7872340425532, Blast_Score=596, Evalue=1e-170,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 60841; Mature: 60841

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEREYMEFDVVIVGAGPAGLSAACRLKQKAAEAGKEISVCVVEKGSEVGAHILSGAVFEP
CCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHCCCCCCC
RALNELFPDWKELGAPLNTPVTRDDIFVLKNAESAQKIPDFFVPKTMHNEGNYIISLGNL
HHHHHHCCCHHHHCCCCCCCCCCCCEEEEECCCHHHHCCCHHCCCEECCCCCEEEEHHHH
CRWLAQQAENLGVEIYPGFAAQEALIDENGVVRGIITGDLGVDREGHPKEGLYTPGMELR
HHHHHHHHHHCCEEEECCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
GKYTLFAEGCRGHIGKQLIKRYNLDSDADAQHYGIGLKEIWEIDPAKHQPGLVVHTAGWP
CCEEEEECCHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHCCCCCCCCCCEEEEECCCC
MDIMGTENTGGSFLYHLENNQVVVGLIVDLSYSNTYLSPFDEFQRLKHHPVLKQYLEGGK
EEEEECCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHCCCC
RISYGARAICKGGLNSLPKMVFKGGALIGCDLGTLNFAKIKGSHTAMKSGMLAAESVADA
EECCCHHHHHHCCHHHHHHHHHCCCCEEEECCCCCEEEEECCCHHHHHHCCHHHHHHHHH
LFAEKDGTEELTTYVDAFKKSWLYEELFASRNFGPAIHKFGAIVGGGFNWLDQNIFGGKL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCC
PFTLHDTKPDYACLKLAADCKKIDYPKPDGKISFDKLSSVFISGTNHEEEQPCHLKLTDP
CEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEHHHHCEEEEECCCCCCCCCCEEEECCC
TIPLSKNLPLYDEPAQRYCPAGVYEVITKEDGEKRFQINAQNCVHCKTCDIKDPSQNITW
CCCCCCCCCCCCCCHHHHCCCCHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCCCEEE
VTPEGAGGPTYPNM
ECCCCCCCCCCCCC
>Mature Secondary Structure
MEREYMEFDVVIVGAGPAGLSAACRLKQKAAEAGKEISVCVVEKGSEVGAHILSGAVFEP
CCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHCCCCCCC
RALNELFPDWKELGAPLNTPVTRDDIFVLKNAESAQKIPDFFVPKTMHNEGNYIISLGNL
HHHHHHCCCHHHHCCCCCCCCCCCCEEEEECCCHHHHCCCHHCCCEECCCCCEEEEHHHH
CRWLAQQAENLGVEIYPGFAAQEALIDENGVVRGIITGDLGVDREGHPKEGLYTPGMELR
HHHHHHHHHHCCEEEECCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
GKYTLFAEGCRGHIGKQLIKRYNLDSDADAQHYGIGLKEIWEIDPAKHQPGLVVHTAGWP
CCEEEEECCHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHCCCCCCCCCCEEEEECCCC
MDIMGTENTGGSFLYHLENNQVVVGLIVDLSYSNTYLSPFDEFQRLKHHPVLKQYLEGGK
EEEEECCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHCCCC
RISYGARAICKGGLNSLPKMVFKGGALIGCDLGTLNFAKIKGSHTAMKSGMLAAESVADA
EECCCHHHHHHCCHHHHHHHHHCCCCEEEECCCCCEEEEECCCHHHHHHCCHHHHHHHHH
LFAEKDGTEELTTYVDAFKKSWLYEELFASRNFGPAIHKFGAIVGGGFNWLDQNIFGGKL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCC
PFTLHDTKPDYACLKLAADCKKIDYPKPDGKISFDKLSSVFISGTNHEEEQPCHLKLTDP
CEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEHHHHCEEEEECCCCCCCCCCEEEECCC
TIPLSKNLPLYDEPAQRYCPAGVYEVITKEDGEKRFQINAQNCVHCKTCDIKDPSQNITW
CCCCCCCCCCCCCCHHHHCCCCHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCCCEEE
VTPEGAGGPTYPNM
ECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]