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The map label for this gene is ynfA [C]

Identifier: 77460326

GI number: 77460326

Start: 4647409

End: 4647750

Strand: Reverse

Name: ynfA [C]

Synonym: Pfl01_4105

Alternate gene names: 77460326

Gene position: 4647750-4647409 (Counterclockwise)

Preceding gene: 77460327

Following gene: 77460325

Centisome position: 72.19

GC content: 61.99

Gene sequence:

>342_bases
ATGTCTTGCATGCTCAATTACCTGTGGTTCTTCCTCGCCGCGCTGTTCGAAATCGCCGGCTGTTTCGCGTTCTGGATGTG
GTTGCGCCAGGGCAAGAGCGCCTTGTGGGTGATCCCGGCGCTGATCAGCCTGACCCTGTTCGCGCTGCTGTTGACGCGCG
TCGAAGCGACCTACGCCGGTCGCGCCTACGCCGCGTATGGTGGCATCTACATCATTGCTTCGATTGGCTGGCTGGCGGTG
GTCGAGCGCATCCGCCCGTTGGGGTCGGACTGGATCGGTGTGGCGTTGTGTGTGATCGGGGCGACTGTGATTCTGTTCGG
GCCACGGTTTTCCGCGAGCTGA

Upstream 100 bases:

>100_bases
ATGGCCGAAAAGATGCGCGCCAAGTCCAAACAGAACAACGGCTGAACTTGCCCGGGGTTCGCCGCATCGTTAGGGTGGCC
GCAACAGTCACCCTGACGAG

Downstream 100 bases:

>100_bases
ATCTTGCAGGCCTGAAGGAAACGTCTGAAGGCTTGCGCGCCCTGACGCGTAGGGAATGACTGAATTGCCCGGGGTGCATT
GTAGGGCGGTCGAAACCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MSCMLNYLWFFLAALFEIAGCFAFWMWLRQGKSALWVIPALISLTLFALLLTRVEATYAGRAYAAYGGIYIIASIGWLAV
VERIRPLGSDWIGVALCVIGATVILFGPRFSAS

Sequences:

>Translated_113_residues
MSCMLNYLWFFLAALFEIAGCFAFWMWLRQGKSALWVIPALISLTLFALLLTRVEATYAGRAYAAYGGIYIIASIGWLAV
VERIRPLGSDWIGVALCVIGATVILFGPRFSAS
>Mature_112_residues
SCMLNYLWFFLAALFEIAGCFAFWMWLRQGKSALWVIPALISLTLFALLLTRVEATYAGRAYAAYGGIYIIASIGWLAVV
ERIRPLGSDWIGVALCVIGATVILFGPRFSAS

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family [H]

Homologues:

Organism=Escherichia coli, GI1787865, Length=98, Percent_Identity=42.8571428571429, Blast_Score=74, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003844 [H]

Pfam domain/function: PF02694 UPF0060 [H]

EC number: NA

Molecular weight: Translated: 12475; Mature: 12344

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCMLNYLWFFLAALFEIAGCFAFWMWLRQGKSALWVIPALISLTLFALLLTRVEATYAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
RAYAAYGGIYIIASIGWLAVVERIRPLGSDWIGVALCVIGATVILFGPRFSAS
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SCMLNYLWFFLAALFEIAGCFAFWMWLRQGKSALWVIPALISLTLFALLLTRVEATYAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
RAYAAYGGIYIIASIGWLAVVERIRPLGSDWIGVALCVIGATVILFGPRFSAS
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA