| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is mmuP [C]
Identifier: 77460255
GI number: 77460255
Start: 4561256
End: 4562620
Strand: Direct
Name: mmuP [C]
Synonym: Pfl01_4034
Alternate gene names: 77460255
Gene position: 4561256-4562620 (Clockwise)
Preceding gene: 77460248
Following gene: 77460256
Centisome position: 70.84
GC content: 61.54
Gene sequence:
>1365_bases ATGAACACACAACTCAAACCCACGCTGGGCACCTTGCACCTGTGGGGCATCGCGGTGGGGCTGGTGATTTCCGGGGAGTA CTTCGGCTGGAGTTACGGCTGGGGCGTCGCGGGAACCCTGGGTTTCCTGGTGACCTCGTTCATGGTCGCGACCATGTACA CCTGCTTCATTTTCAGCTTTACCGAACTGACCACGGCGATCCCCCACGCGGGCGGGCCGTTTGCCTACAGTCGCCGGGCT TTCGGTGAAAAAGGTGGATTGATTGCCGGACTGGCGACACTGATCGAATTCGTCTTCGCCCCGCCGGCGATTGCCTTGGC GATTGGTGCGTATCTGAACGTGCAGTTTCCGGCCCTCGACCCGAAACATGCGGCGGTCGGCGCTTACATCGTGTTCATGG GTCTGAACATTCTTGGCGTGAAACTGGCCGCAACGTTCGAGTTGATCGTCTGCATCCTGGCCGTTGCCGAATTGCTGGTG TTCATGGGCGTCGTCGCCCCGGCCTTCAGCTTCAGCAACTTCGCCCTCAACGGCTGGGCCGGTTCGGACGTCTTTGGTGC TCCGGCGATCGCCGGGATGTTCGCGGCGATTCCGTTTGCGATCTGGTTTTTCCTCGCCATCGAAGGCGCCGCCATGGCCG CCGAAGAAGCCAAGGACCCGAAACGCACGATTCCCAAGGCCTACATCAGCGGCATTCTGACCTTGGTGTTGCTGGCCATG GGCGTGATGTTCTTCGCCGGTGGCGTCGGTGACTGGCGCACCCTGTCGAACATCAACGACCCGCTGCCTCAGGCAATGAA AACCGTGGTCGGTGACAACTCCGGCTGGCTGCACATGCTGGTCTGGATCGGTCTGTTCGGGCTGGTGGCGAGTTTCCACG GGATCATTCTTGGCTACTCGCGGCAATTCTTCGCCCTCGCACGCGCCGGTTACCTGCCCGCCTCGCTGGCGAAACTGTCG CGCTTCCAGACTCCGCACCGCGCCATCATCGCCGGCGGCGTGATCGGCATCGCGGCGATCTACAGCGACGGCCTGATCAA CCTCGGCGGCATGACCCTCACCGCCGCGATGATCACCATGGCGGTGTTCGGGGCGATCGTGATGTACATCATGAGCATGC TCAGTCTGTTCAAACTGCGCAAATCCGAACCGAATCTGGAGCGCACCTTCCGCGCGCCGTGCTATCCGCTGATCCCGCTG ATTGCATTGGTGCTGGCCGTGGTGTGTCTGGTGGCGATGGCCTGGTTCAATGCGCTGATCGGGCTGATCTTCCTCGGCTT CATGGCGGTCGGTTTCGGCTACTTCCTGTTGACCGGCCAATTGCGCGCCAACGCCCCGGCAGACGCCATGCTCACCGGAC TGTAA
Upstream 100 bases:
>100_bases TACGACAGCTTTCAGCTCTTTACGACCCGCCAATACAAAATGGCACGCCCACTGCACACGCCCTTCCCCGAGCTTTCCAA ACCGTTCAGGGAGCAAACAC
Downstream 100 bases:
>100_bases ACCGCGAAGGGCATAACCGGCCTAGAATGGAACCACTGCGAATGCACTTCGCTCAAAGTGGTATGCAGCGTTGCACGGCG AAACCCTCGCCCGTCGACCT
Product: amino acid permease-associated protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MNTQLKPTLGTLHLWGIAVGLVISGEYFGWSYGWGVAGTLGFLVTSFMVATMYTCFIFSFTELTTAIPHAGGPFAYSRRA FGEKGGLIAGLATLIEFVFAPPAIALAIGAYLNVQFPALDPKHAAVGAYIVFMGLNILGVKLAATFELIVCILAVAELLV FMGVVAPAFSFSNFALNGWAGSDVFGAPAIAGMFAAIPFAIWFFLAIEGAAMAAEEAKDPKRTIPKAYISGILTLVLLAM GVMFFAGGVGDWRTLSNINDPLPQAMKTVVGDNSGWLHMLVWIGLFGLVASFHGIILGYSRQFFALARAGYLPASLAKLS RFQTPHRAIIAGGVIGIAAIYSDGLINLGGMTLTAAMITMAVFGAIVMYIMSMLSLFKLRKSEPNLERTFRAPCYPLIPL IALVLAVVCLVAMAWFNALIGLIFLGFMAVGFGYFLLTGQLRANAPADAMLTGL
Sequences:
>Translated_454_residues MNTQLKPTLGTLHLWGIAVGLVISGEYFGWSYGWGVAGTLGFLVTSFMVATMYTCFIFSFTELTTAIPHAGGPFAYSRRA FGEKGGLIAGLATLIEFVFAPPAIALAIGAYLNVQFPALDPKHAAVGAYIVFMGLNILGVKLAATFELIVCILAVAELLV FMGVVAPAFSFSNFALNGWAGSDVFGAPAIAGMFAAIPFAIWFFLAIEGAAMAAEEAKDPKRTIPKAYISGILTLVLLAM GVMFFAGGVGDWRTLSNINDPLPQAMKTVVGDNSGWLHMLVWIGLFGLVASFHGIILGYSRQFFALARAGYLPASLAKLS RFQTPHRAIIAGGVIGIAAIYSDGLINLGGMTLTAAMITMAVFGAIVMYIMSMLSLFKLRKSEPNLERTFRAPCYPLIPL IALVLAVVCLVAMAWFNALIGLIFLGFMAVGFGYFLLTGQLRANAPADAMLTGL >Mature_454_residues MNTQLKPTLGTLHLWGIAVGLVISGEYFGWSYGWGVAGTLGFLVTSFMVATMYTCFIFSFTELTTAIPHAGGPFAYSRRA FGEKGGLIAGLATLIEFVFAPPAIALAIGAYLNVQFPALDPKHAAVGAYIVFMGLNILGVKLAATFELIVCILAVAELLV FMGVVAPAFSFSNFALNGWAGSDVFGAPAIAGMFAAIPFAIWFFLAIEGAAMAAEEAKDPKRTIPKAYISGILTLVLLAM GVMFFAGGVGDWRTLSNINDPLPQAMKTVVGDNSGWLHMLVWIGLFGLVASFHGIILGYSRQFFALARAGYLPASLAKLS RFQTPHRAIIAGGVIGIAAIYSDGLINLGGMTLTAAMITMAVFGAIVMYIMSMLSLFKLRKSEPNLERTFRAPCYPLIPL IALVLAVVCLVAMAWFNALIGLIFLGFMAVGFGYFLLTGQLRANAPADAMLTGL
Specific function: Probable amino-acid or metabolite transport protein [H]
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]
Homologues:
Organism=Escherichia coli, GI87081708, Length=473, Percent_Identity=23.2558139534884, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790653, Length=368, Percent_Identity=23.0978260869565, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1786789, Length=391, Percent_Identity=20.9718670076726, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1786602, Length=407, Percent_Identity=20.3931203931204, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI87081869, Length=375, Percent_Identity=20.5333333333333, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI87082250, Length=435, Percent_Identity=22.7586206896552, Blast_Score=62, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 48228; Mature: 48228
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTQLKPTLGTLHLWGIAVGLVISGEYFGWSYGWGVAGTLGFLVTSFMVATMYTCFIFSF CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TELTTAIPHAGGPFAYSRRAFGEKGGLIAGLATLIEFVFAPPAIALAIGAYLNVQFPALD HHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCCC PKHAAVGAYIVFMGLNILGVKLAATFELIVCILAVAELLVFMGVVAPAFSFSNFALNGWA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC GSDVFGAPAIAGMFAAIPFAIWFFLAIEGAAMAAEEAKDPKRTIPKAYISGILTLVLLAM CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH GVMFFAGGVGDWRTLSNINDPLPQAMKTVVGDNSGWLHMLVWIGLFGLVASFHGIILGYS HHHHHHCCCCCHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC RQFFALARAGYLPASLAKLSRFQTPHRAIIAGGVIGIAAIYSDGLINLGGMTLTAAMITM HHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AVFGAIVMYIMSMLSLFKLRKSEPNLERTFRAPCYPLIPLIALVLAVVCLVAMAWFNALI HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GLIFLGFMAVGFGYFLLTGQLRANAPADAMLTGL HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCC >Mature Secondary Structure MNTQLKPTLGTLHLWGIAVGLVISGEYFGWSYGWGVAGTLGFLVTSFMVATMYTCFIFSF CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TELTTAIPHAGGPFAYSRRAFGEKGGLIAGLATLIEFVFAPPAIALAIGAYLNVQFPALD HHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCCC PKHAAVGAYIVFMGLNILGVKLAATFELIVCILAVAELLVFMGVVAPAFSFSNFALNGWA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC GSDVFGAPAIAGMFAAIPFAIWFFLAIEGAAMAAEEAKDPKRTIPKAYISGILTLVLLAM CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH GVMFFAGGVGDWRTLSNINDPLPQAMKTVVGDNSGWLHMLVWIGLFGLVASFHGIILGYS HHHHHHCCCCCHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC RQFFALARAGYLPASLAKLSRFQTPHRAIIAGGVIGIAAIYSDGLINLGGMTLTAAMITM HHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AVFGAIVMYIMSMLSLFKLRKSEPNLERTFRAPCYPLIPLIALVLAVVCLVAMAWFNALI HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GLIFLGFMAVGFGYFLLTGQLRANAPADAMLTGL HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]