| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460145
Identifier: 77460145
GI number: 77460145
Start: 4440409
End: 4440951
Strand: Direct
Name: 77460145
Synonym: Pfl01_3924
Alternate gene names: NA
Gene position: 4440409-4440951 (Clockwise)
Preceding gene: 77460144
Following gene: 77460146
Centisome position: 68.97
GC content: 62.62
Gene sequence:
>543_bases GTGAGCAAGTCCACCACAGTGGTTCAACCTTCGCGACTGAGCGTGATCTGGCATAAATGGCGCTTCCACATCAACGTGCT GCTGTTGCTGATTCCGCTGGGATTCATGCCCCGGTATTTCGCCGACCAGGCGCTGTTTCGCGGCGACAGCGGACTGGGCG AACGCGAGATCGGCGAAGTCCAGGTGGGTCCCTGGAGCCTGAGGCTGGCCGAGTTTCGCAACGAACCACCGCTTCCCGAC GGCGCGGCCGGTTATCTGAAGGGCTTTAGCGCCGCCCTGTGCGACGCCTGTGTCGAACAGGTCAAGGCCACCTACCTGCG TATCGGCAAGCCGCGCAGTCTGCGCGCCGCGGGTTCGATCTTCTTCGGCACGCCTTACAGCATGGGTACGCAGATGCCCG TCCCGGACAAAACCAGAGCCGACGCCGAACTGTGGATCACCATGGAAGGCTGGGACGGCAGCATGCACCAAGCCTCGATT CCGCTGAGCCAGGCCTCCCCCGCCACCGTTGCCTGGCTGAACAAACAAGGAGCCAAACCATGA
Upstream 100 bases:
>100_bases GCACCGCGCTGGCGACCGCCAACGCCCTCAAGCGCGAGCACAAGAAACAGCGCGGTCAGGCACAACCGGCCCTGCACCGT GAACCGTCGGAGGTCCATCT
Downstream 100 bases:
>100_bases GCCACCCTTCCCGCTTGAACATGAGCGTTGCATTGCTGGCGCTGTGCGCCGGTTTCAGCGCCAGCGCCCTGGCCCACAAC CCGATGTGCGAGTGCAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSKSTTVVQPSRLSVIWHKWRFHINVLLLLIPLGFMPRYFADQALFRGDSGLGEREIGEVQVGPWSLRLAEFRNEPPLPD GAAGYLKGFSAALCDACVEQVKATYLRIGKPRSLRAAGSIFFGTPYSMGTQMPVPDKTRADAELWITMEGWDGSMHQASI PLSQASPATVAWLNKQGAKP
Sequences:
>Translated_180_residues MSKSTTVVQPSRLSVIWHKWRFHINVLLLLIPLGFMPRYFADQALFRGDSGLGEREIGEVQVGPWSLRLAEFRNEPPLPD GAAGYLKGFSAALCDACVEQVKATYLRIGKPRSLRAAGSIFFGTPYSMGTQMPVPDKTRADAELWITMEGWDGSMHQASI PLSQASPATVAWLNKQGAKP >Mature_179_residues SKSTTVVQPSRLSVIWHKWRFHINVLLLLIPLGFMPRYFADQALFRGDSGLGEREIGEVQVGPWSLRLAEFRNEPPLPDG AAGYLKGFSAALCDACVEQVKATYLRIGKPRSLRAAGSIFFGTPYSMGTQMPVPDKTRADAELWITMEGWDGSMHQASIP LSQASPATVAWLNKQGAKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19833; Mature: 19702
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSTTVVQPSRLSVIWHKWRFHINVLLLLIPLGFMPRYFADQALFRGDSGLGEREIGEV CCCCCEEECCCHHEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEE QVGPWSLRLAEFRNEPPLPDGAAGYLKGFSAALCDACVEQVKATYLRIGKPRSLRAAGSI EECCCEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE FFGTPYSMGTQMPVPDKTRADAELWITMEGWDGSMHQASIPLSQASPATVAWLNKQGAKP EECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCC >Mature Secondary Structure SKSTTVVQPSRLSVIWHKWRFHINVLLLLIPLGFMPRYFADQALFRGDSGLGEREIGEV CCCCEEECCCHHEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEE QVGPWSLRLAEFRNEPPLPDGAAGYLKGFSAALCDACVEQVKATYLRIGKPRSLRAAGSI EECCCEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE FFGTPYSMGTQMPVPDKTRADAELWITMEGWDGSMHQASIPLSQASPATVAWLNKQGAKP EECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA