Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77460144

Identifier: 77460144

GI number: 77460144

Start: 4439213

End: 4440412

Strand: Direct

Name: 77460144

Synonym: Pfl01_3923

Alternate gene names: NA

Gene position: 4439213-4440412 (Clockwise)

Preceding gene: 77460143

Following gene: 77460145

Centisome position: 68.95

GC content: 60.92

Gene sequence:

>1200_bases
ATGTCGAAGAAATCCCGCTCGAAACTGTGGTTCCTGGTACACAGCTGGCTGGCGTTGCCAATCTGGTTTTTTGTCCTGAT
TGTCTGCGTCACCGGCACCCTGGCGGTGGTCAGCCAGGAAATCGTCTGGCTGGTGAATCCGCAAATGCGCGCCACCCAAC
CATCGGACGATGCCCCGCTGCTGGGTTATGACCAGATCATCAGCGCGATCAAGACTGCCGAACCACAGTTGCTGGTCGAA
CGCATCAGTCGTCCCGACGAATCGCATTTCGCGCTGGAGGTGAACGTCAGTCAACCTGACGGGCGCTCGGTAACGGTCTA
CGTCAACCCTTACACCGGTGTGATCCAGGGCACCGCGCCCGACTTCAATTTCCGGGCCTTCACCCGGGCCTTGCATGGCT
GGTGGCTGGTACCGTTCACCAACGGTTACAGCTGGGGCTGGTATCTGGTGTCCTTCCTGGCGCTGCCGATGCTGGCTTCG
CTGGTGACCGGACTGGTGGTCTACAAACGTTTCTGGAAGGGCTTTTTCAGCCCGACCCTGCGCCTGCGTCACGGTGCGCG
GATATTCTGGGGCGATTTCCACCGTCTCAGCGGCATCTGGTCGATCTGGTTTATCGCGGTGATCTCCGTCACCGCCGTGT
GGTTCCTGATCGAAGCCATTCTTTCGGACAACCACATCTCCATCTCCAGCGAGCCGGTCATCGCAGCCATGTCCCGTGAA
GGCGTGCCGCTGTCCGCCGATGGTTCGCCACCGCCACGGGTCAGCCTGGATCACGCCATCGAAATTGCCCAGCAACGGAT
TCCCGGGTTCGAAGCCAGCACCATCAATCTGCCCGGCAATGCCTACAGCCACCTCGATATCCGGGGACGCGGCTGGTATC
CGCTGATGTTCCAGTCAGCCACGCTCAACCCTTACAGCGGTGAAGTGGCAGCCTCGCGCCTGCTCTCCGACCGGACCTCC
CTGGAGTTCGTCACCGAATCCATGCGTCCGCTGCACACCGGCGACTTCGGTGGACTGTGGATCAAGCTGATCTGGTTCTT
CTTCGGACTGGTGCTGAGCATGATGGTCCTCAGCGGGCTGTTGATCTGGACCAAGCGCACCGCGCTGGCGACCGCCAACG
CCCTCAAGCGCGAGCACAAGAAACAGCGCGGTCAGGCACAACCGGCCCTGCACCGTGAACCGTCGGAGGTCCATCTGTGA

Upstream 100 bases:

>100_bases
GCCGGTCGCGTAGGCAAAAGCCACGACGGGCCCTTCAGGGACTGCCGCGCTGCGAAGCCCGTAGTGGCCGAGTCCTCTCA
CCGAATCAAGACCCGTCATC

Downstream 100 bases:

>100_bases
GCAAGTCCACCACAGTGGTTCAACCTTCGCGACTGAGCGTGATCTGGCATAAATGGCGCTTCCACATCAACGTGCTGCTG
TTGCTGATTCCGCTGGGATT

Product: hypothetical protein

Products: NA

Alternate protein names: PepSY-Associated TM Helix Domain-Containing Protein; PepSY-Associated TM Helix; Iron-Regulated Membrane Protein; Peptidase; PepSY-Associated TM Helix Family; PepSY-Associated Membrane Protein; Cytoplasmic Membrane Protein; Membrane-Bound Protein; Sulfite Reductase Flavoprotein Component

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MSKKSRSKLWFLVHSWLALPIWFFVLIVCVTGTLAVVSQEIVWLVNPQMRATQPSDDAPLLGYDQIISAIKTAEPQLLVE
RISRPDESHFALEVNVSQPDGRSVTVYVNPYTGVIQGTAPDFNFRAFTRALHGWWLVPFTNGYSWGWYLVSFLALPMLAS
LVTGLVVYKRFWKGFFSPTLRLRHGARIFWGDFHRLSGIWSIWFIAVISVTAVWFLIEAILSDNHISISSEPVIAAMSRE
GVPLSADGSPPPRVSLDHAIEIAQQRIPGFEASTINLPGNAYSHLDIRGRGWYPLMFQSATLNPYSGEVAASRLLSDRTS
LEFVTESMRPLHTGDFGGLWIKLIWFFFGLVLSMMVLSGLLIWTKRTALATANALKREHKKQRGQAQPALHREPSEVHL

Sequences:

>Translated_399_residues
MSKKSRSKLWFLVHSWLALPIWFFVLIVCVTGTLAVVSQEIVWLVNPQMRATQPSDDAPLLGYDQIISAIKTAEPQLLVE
RISRPDESHFALEVNVSQPDGRSVTVYVNPYTGVIQGTAPDFNFRAFTRALHGWWLVPFTNGYSWGWYLVSFLALPMLAS
LVTGLVVYKRFWKGFFSPTLRLRHGARIFWGDFHRLSGIWSIWFIAVISVTAVWFLIEAILSDNHISISSEPVIAAMSRE
GVPLSADGSPPPRVSLDHAIEIAQQRIPGFEASTINLPGNAYSHLDIRGRGWYPLMFQSATLNPYSGEVAASRLLSDRTS
LEFVTESMRPLHTGDFGGLWIKLIWFFFGLVLSMMVLSGLLIWTKRTALATANALKREHKKQRGQAQPALHREPSEVHL
>Mature_398_residues
SKKSRSKLWFLVHSWLALPIWFFVLIVCVTGTLAVVSQEIVWLVNPQMRATQPSDDAPLLGYDQIISAIKTAEPQLLVER
ISRPDESHFALEVNVSQPDGRSVTVYVNPYTGVIQGTAPDFNFRAFTRALHGWWLVPFTNGYSWGWYLVSFLALPMLASL
VTGLVVYKRFWKGFFSPTLRLRHGARIFWGDFHRLSGIWSIWFIAVISVTAVWFLIEAILSDNHISISSEPVIAAMSREG
VPLSADGSPPPRVSLDHAIEIAQQRIPGFEASTINLPGNAYSHLDIRGRGWYPLMFQSATLNPYSGEVAASRLLSDRTSL
EFVTESMRPLHTGDFGGLWIKLIWFFFGLVLSMMVLSGLLIWTKRTALATANALKREHKKQRGQAQPALHREPSEVHL

Specific function: Unknown

COG id: COG3182

COG function: function code S; Uncharacterized iron-regulated membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44917; Mature: 44785

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKSRSKLWFLVHSWLALPIWFFVLIVCVTGTLAVVSQEIVWLVNPQMRATQPSDDAPL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCC
LGYDQIISAIKTAEPQLLVERISRPDESHFALEVNVSQPDGRSVTVYVNPYTGVIQGTAP
CCHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEECCCCCEEECCCC
DFNFRAFTRALHGWWLVPFTNGYSWGWYLVSFLALPMLASLVTGLVVYKRFWKGFFSPTL
CCCHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
RLRHGARIFWGDFHRLSGIWSIWFIAVISVTAVWFLIEAILSDNHISISSEPVIAAMSRE
HHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEECCC
GVPLSADGSPPPRVSLDHAIEIAQQRIPGFEASTINLPGNAYSHLDIRGRGWYPLMFQSA
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEECCCCCCEEEEECC
TLNPYSGEVAASRLLSDRTSLEFVTESMRPLHTGDFGGLWIKLIWFFFGLVLSMMVLSGL
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LIWTKRTALATANALKREHKKQRGQAQPALHREPSEVHL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCC
>Mature Secondary Structure 
SKKSRSKLWFLVHSWLALPIWFFVLIVCVTGTLAVVSQEIVWLVNPQMRATQPSDDAPL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCC
LGYDQIISAIKTAEPQLLVERISRPDESHFALEVNVSQPDGRSVTVYVNPYTGVIQGTAP
CCHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEECCCCCEEECCCC
DFNFRAFTRALHGWWLVPFTNGYSWGWYLVSFLALPMLASLVTGLVVYKRFWKGFFSPTL
CCCHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
RLRHGARIFWGDFHRLSGIWSIWFIAVISVTAVWFLIEAILSDNHISISSEPVIAAMSRE
HHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEECCC
GVPLSADGSPPPRVSLDHAIEIAQQRIPGFEASTINLPGNAYSHLDIRGRGWYPLMFQSA
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEECCCCCCEEEEECC
TLNPYSGEVAASRLLSDRTSLEFVTESMRPLHTGDFGGLWIKLIWFFFGLVLSMMVLSGL
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LIWTKRTALATANALKREHKKQRGQAQPALHREPSEVHL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA