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The map label for this gene is amaB [H]

Identifier: 77460117

GI number: 77460117

Start: 4406649

End: 4407887

Strand: Reverse

Name: amaB [H]

Synonym: Pfl01_3896

Alternate gene names: 77460117

Gene position: 4407887-4406649 (Counterclockwise)

Preceding gene: 77460118

Following gene: 77460116

Centisome position: 68.46

GC content: 64.33

Gene sequence:

>1239_bases
ATGTTGAAAATCAATGGCGAACGCCTGTGGGCGAGCCTGATGGCCATGGCCGAAATCGGTGCGACAGCCCGAGGCGGCAG
CTGCCGTCTGGCATTGAGCGACGAAGACAAGGCCGGTCGCGAACTGTTCGCCCACTGGTGCCGCGAAGCCGGCATGACCC
TGAGCGTGGACGCCATCGGCAACCTGTTCGCCCGTCGCGCCGGCACCGATTCGGACGCCGCGCCGGTGATGATGGGCAGC
CACCTCGACACCCAGCCCGAAGGCGGGCGTTTCGATGGCGTCTACGGTGTACTCGCCGGTCTGGAAGTGGTGCGTTGCCT
AAACGACCAGAACATCCAGACCCGCAAACCGCTGGAAGTGGCGGTGTGGACCAACGAAGAAGGCGCGCGCTTCACCCCGG
CCATGTTCGGCTCGGCGGTGTTCACCGGGATCATGGATCTGAACGCCGCGCTGACGGTACGCGATATCGATGGCATCAGC
GTCGCCGATGCTTTGCAGCGTACCGGTTACGCCGGTGAGCGTCCGTTGGGCGGCGCGGTGGACGCGTATTTTGAAGCGCA
CATCGAACAAGGCCCGATCCTCGAAGACAACGCCAAAAGCATCGGCGTGGTCACGGGCGGTCAGGCGATCCGCTGGCTCG
ACGTGCGCGTGGAAGGCATGGCTGCCCACGCCGGTACCACGCCGATGCCGCTGCGCAAAGATGCGCTGTACGGCGTGGCG
CGGATGATTCAGGCGATTGAAGGTCTGGCGGCGGATTTTGCCCCCGAAGGTCTGACCACGGTCGGCGAGTTGAGCATCAA
TAAATCCTCGCGCAACACCATTCCGGGGCTGGTGAATTTCACCGTCGATCTGCGTCATCACCGCGACGACGCCATTGCCG
CCATGGAGCAACAGGTCCGCGCCCGGTTGCAGGCCATCGCCGATGGCCGAGGCCTGAACCTGACGATCACCCAGCACTGG
AACAGCCCGGCCACGCCGTTCGACGCCGAATGCGTGGCAGCCGTGCAAGAAGCGGTGGATGCGCTGGGCTACGCTCAGCA
GTCGATTGTCAGCGGCGCCGGGCATGACGCGATTCACCTCGCGCGCTACTGCCCGACGGCGATGGTATTCATCCCGTGTG
TTGGCGGCCTGAGCCACAACGAAGCCGAAGACGTGTTGCCCGAAGACGTGAAGCAGGGCACCGATGTATTGCTCAACGCC
GTGCTGGCCCGCGCCGGTCGAATCGAACAGGAAGCCTGA

Upstream 100 bases:

>100_bases
GGCATTTCGCTGGTCTGCGTGCTGTCTCTCGCTCGTCGTCACGCCAACGTCCATCGCGCGGAAATGGCCCGTGCCTGACC
CGGAATCTCAGGAGAACCTC

Downstream 100 bases:

>100_bases
ACCATGCGCAGTTTTTTCCACCCCGAACAATTGCTCCACCATCCACGCAGCTATTACTCGCGCGGGCAGATGCGTACGCC
GCAGGAAGTTCCCGAGCGTG

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MLKINGERLWASLMAMAEIGATARGGSCRLALSDEDKAGRELFAHWCREAGMTLSVDAIGNLFARRAGTDSDAAPVMMGS
HLDTQPEGGRFDGVYGVLAGLEVVRCLNDQNIQTRKPLEVAVWTNEEGARFTPAMFGSAVFTGIMDLNAALTVRDIDGIS
VADALQRTGYAGERPLGGAVDAYFEAHIEQGPILEDNAKSIGVVTGGQAIRWLDVRVEGMAAHAGTTPMPLRKDALYGVA
RMIQAIEGLAADFAPEGLTTVGELSINKSSRNTIPGLVNFTVDLRHHRDDAIAAMEQQVRARLQAIADGRGLNLTITQHW
NSPATPFDAECVAAVQEAVDALGYAQQSIVSGAGHDAIHLARYCPTAMVFIPCVGGLSHNEAEDVLPEDVKQGTDVLLNA
VLARAGRIEQEA

Sequences:

>Translated_412_residues
MLKINGERLWASLMAMAEIGATARGGSCRLALSDEDKAGRELFAHWCREAGMTLSVDAIGNLFARRAGTDSDAAPVMMGS
HLDTQPEGGRFDGVYGVLAGLEVVRCLNDQNIQTRKPLEVAVWTNEEGARFTPAMFGSAVFTGIMDLNAALTVRDIDGIS
VADALQRTGYAGERPLGGAVDAYFEAHIEQGPILEDNAKSIGVVTGGQAIRWLDVRVEGMAAHAGTTPMPLRKDALYGVA
RMIQAIEGLAADFAPEGLTTVGELSINKSSRNTIPGLVNFTVDLRHHRDDAIAAMEQQVRARLQAIADGRGLNLTITQHW
NSPATPFDAECVAAVQEAVDALGYAQQSIVSGAGHDAIHLARYCPTAMVFIPCVGGLSHNEAEDVLPEDVKQGTDVLLNA
VLARAGRIEQEA
>Mature_412_residues
MLKINGERLWASLMAMAEIGATARGGSCRLALSDEDKAGRELFAHWCREAGMTLSVDAIGNLFARRAGTDSDAAPVMMGS
HLDTQPEGGRFDGVYGVLAGLEVVRCLNDQNIQTRKPLEVAVWTNEEGARFTPAMFGSAVFTGIMDLNAALTVRDIDGIS
VADALQRTGYAGERPLGGAVDAYFEAHIEQGPILEDNAKSIGVVTGGQAIRWLDVRVEGMAAHAGTTPMPLRKDALYGVA
RMIQAIEGLAADFAPEGLTTVGELSINKSSRNTIPGLVNFTVDLRHHRDDAIAAMEQQVRARLQAIADGRGLNLTITQHW
NSPATPFDAECVAAVQEAVDALGYAQQSIVSGAGHDAIHLARYCPTAMVFIPCVGGLSHNEAEDVLPEDVKQGTDVLLNA
VLARAGRIEQEA

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=389, Percent_Identity=32.3907455012853, Blast_Score=197, Evalue=8e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 43841; Mature: 43841

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKINGERLWASLMAMAEIGATARGGSCRLALSDEDKAGRELFAHWCREAGMTLSVDAIG
CEEECHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEHHHHH
NLFARRAGTDSDAAPVMMGSHLDTQPEGGRFDGVYGVLAGLEVVRCLNDQNIQTRKPLEV
HHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEE
AVWTNEEGARFTPAMFGSAVFTGIMDLNAALTVRDIDGISVADALQRTGYAGERPLGGAV
EEEECCCCCEECHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCHH
DAYFEAHIEQGPILEDNAKSIGVVTGGQAIRWLDVRVEGMAAHAGTTPMPLRKDALYGVA
HHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHH
RMIQAIEGLAADFAPEGLTTVGELSINKSSRNTIPGLVNFTVDLRHHRDDAIAAMEQQVR
HHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHH
ARLQAIADGRGLNLTITQHWNSPATPFDAECVAAVQEAVDALGYAQQSIVSGAGHDAIHL
HHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
ARYCPTAMVFIPCVGGLSHNEAEDVLPEDVKQGTDVLLNAVLARAGRIEQEA
HHHCCHHEEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLKINGERLWASLMAMAEIGATARGGSCRLALSDEDKAGRELFAHWCREAGMTLSVDAIG
CEEECHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEHHHHH
NLFARRAGTDSDAAPVMMGSHLDTQPEGGRFDGVYGVLAGLEVVRCLNDQNIQTRKPLEV
HHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEE
AVWTNEEGARFTPAMFGSAVFTGIMDLNAALTVRDIDGISVADALQRTGYAGERPLGGAV
EEEECCCCCEECHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCHH
DAYFEAHIEQGPILEDNAKSIGVVTGGQAIRWLDVRVEGMAAHAGTTPMPLRKDALYGVA
HHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHH
RMIQAIEGLAADFAPEGLTTVGELSINKSSRNTIPGLVNFTVDLRHHRDDAIAAMEQQVR
HHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHH
ARLQAIADGRGLNLTITQHWNSPATPFDAECVAAVQEAVDALGYAQQSIVSGAGHDAIHL
HHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
ARYCPTAMVFIPCVGGLSHNEAEDVLPEDVKQGTDVLLNAVLARAGRIEQEA
HHHCCHHEEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]