| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460067
Identifier: 77460067
GI number: 77460067
Start: 4348603
End: 4349547
Strand: Direct
Name: 77460067
Synonym: Pfl01_3846
Alternate gene names: NA
Gene position: 4348603-4349547 (Clockwise)
Preceding gene: 77460061
Following gene: 77460068
Centisome position: 67.54
GC content: 61.06
Gene sequence:
>945_bases ATGAAATCAGCACATCTCAAACATCTTGGTGCCGCCGCCCTGTTGATGCTCAGTGCTACCGCGCAGGTTCACGCCAGCGC GCTGTTCCCGTCACTGCCCGCCAGAACCATCGGCGTACAGGTCAAGATCCAGAATTTCGCCCCGGCCGACGCCGAGCAGA TCAAAGCGGCCGGATTCAGCTTTGTGCGCTTTGGCGTCTGGAGCGACAGCCTCGGCGCCAAGGCCTATCAGAAACAGATC AGCGATGCGTTTGCGGCGGCTCGCTCCGCCGGCTTGCCGGTCTTGATGACCGTGCGCGCCACCAAGCCGTTGAGCGGCGA CCTGGCGACCGCCGGCGAGGCCTTCGCCAACGCGGTAACCGGGCTTGAGCAAACCTGGAGCGCGCAACTGGTAGGGATCG AAATCTGGAATGAGCCGGATCTCGACACCTACTGGCCCACCGGGGACTTCAAAAATACCTTCGTGCCGTTCATGACGGCC ATGTGCAAGACGCTGCAGGGCAAGCCGCAATCGACGCCCCTGGTGGGATTCGGTTTCGCCCGCCCGCCGGCGGCCGGTTC CGCCCCGACCGTGGCACTCAACAGCATTCTCGGCACGTATCCCGAGTGCCTGGACGCCATTTCCTATCACCCCTACGGCA TGACCGCGACGCAGATCAGTAACGCGCAGACCTTCATCCAGCAAAACTTCCGTCTGCCGGGGGTCATCAGTGAATGGGGC ATCTCGGCGCTCGCTTCAAACGGTGGGCCGGAAGGGCAAGCCAGTAAAATCTCCGCGTTCATCGCCGATGTTAAAAAACT CAACATTCCGCTGACGTCGATTTATGAATGGAAGAACAGCGAATCGGGCAGCAACGACCGGGAGAAGAATTTCGGCTTGC TGACCTCCGACGGCCAGCCGAAACCGGCACAGGCGGCGGTCTCGACTCATTTGAACGCCGATTGA
Upstream 100 bases:
>100_bases ACAAAAAATAACATTCGTGCACTTCACGCCCTCTTCGGCATCGAAATACAGGCAACGAGATAACTATTGGCTAGATGTCA TTCTCATCAGGAGAGCCGAC
Downstream 100 bases:
>100_bases GCGGTACAGCGGGTCGGTTGCTTTGAACCTGTGGTTCTTTTTGGCATCGTATTGATCGATAACGCGCCCCGCCTTTCAAA CAGCCGTTTTCAGGTTGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-Xylosidase
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MKSAHLKHLGAAALLMLSATAQVHASALFPSLPARTIGVQVKIQNFAPADAEQIKAAGFSFVRFGVWSDSLGAKAYQKQI SDAFAAARSAGLPVLMTVRATKPLSGDLATAGEAFANAVTGLEQTWSAQLVGIEIWNEPDLDTYWPTGDFKNTFVPFMTA MCKTLQGKPQSTPLVGFGFARPPAAGSAPTVALNSILGTYPECLDAISYHPYGMTATQISNAQTFIQQNFRLPGVISEWG ISALASNGGPEGQASKISAFIADVKKLNIPLTSIYEWKNSESGSNDREKNFGLLTSDGQPKPAQAAVSTHLNAD
Sequences:
>Translated_314_residues MKSAHLKHLGAAALLMLSATAQVHASALFPSLPARTIGVQVKIQNFAPADAEQIKAAGFSFVRFGVWSDSLGAKAYQKQI SDAFAAARSAGLPVLMTVRATKPLSGDLATAGEAFANAVTGLEQTWSAQLVGIEIWNEPDLDTYWPTGDFKNTFVPFMTA MCKTLQGKPQSTPLVGFGFARPPAAGSAPTVALNSILGTYPECLDAISYHPYGMTATQISNAQTFIQQNFRLPGVISEWG ISALASNGGPEGQASKISAFIADVKKLNIPLTSIYEWKNSESGSNDREKNFGLLTSDGQPKPAQAAVSTHLNAD >Mature_314_residues MKSAHLKHLGAAALLMLSATAQVHASALFPSLPARTIGVQVKIQNFAPADAEQIKAAGFSFVRFGVWSDSLGAKAYQKQI SDAFAAARSAGLPVLMTVRATKPLSGDLATAGEAFANAVTGLEQTWSAQLVGIEIWNEPDLDTYWPTGDFKNTFVPFMTA MCKTLQGKPQSTPLVGFGFARPPAAGSAPTVALNSILGTYPECLDAISYHPYGMTATQISNAQTFIQQNFRLPGVISEWG ISALASNGGPEGQASKISAFIADVKKLNIPLTSIYEWKNSESGSNDREKNFGLLTSDGQPKPAQAAVSTHLNAD
Specific function: Unknown
COG id: COG3664
COG function: function code G; Beta-xylosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33221; Mature: 33221
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSAHLKHLGAAALLMLSATAQVHASALFPSLPARTIGVQVKIQNFAPADAEQIKAAGFS CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHCCCE FVRFGVWSDSLGAKAYQKQISDAFAAARSAGLPVLMTVRATKPLSGDLATAGEAFANAVT EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH GLEQTWSAQLVGIEIWNEPDLDTYWPTGDFKNTFVPFMTAMCKTLQGKPQSTPLVGFGFA HHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCC RPPAAGSAPTVALNSILGTYPECLDAISYHPYGMTATQISNAQTFIQQNFRLPGVISEWG CCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH ISALASNGGPEGQASKISAFIADVKKLNIPLTSIYEWKNSESGSNDREKNFGLLTSDGQP HHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHCCCEEECCCCC KPAQAAVSTHLNAD CCHHHHHHHCCCCC >Mature Secondary Structure MKSAHLKHLGAAALLMLSATAQVHASALFPSLPARTIGVQVKIQNFAPADAEQIKAAGFS CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHCCCE FVRFGVWSDSLGAKAYQKQISDAFAAARSAGLPVLMTVRATKPLSGDLATAGEAFANAVT EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH GLEQTWSAQLVGIEIWNEPDLDTYWPTGDFKNTFVPFMTAMCKTLQGKPQSTPLVGFGFA HHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCC RPPAAGSAPTVALNSILGTYPECLDAISYHPYGMTATQISNAQTFIQQNFRLPGVISEWG CCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH ISALASNGGPEGQASKISAFIADVKKLNIPLTSIYEWKNSESGSNDREKNFGLLTSDGQP HHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHCCCEEECCCCC KPAQAAVSTHLNAD CCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA