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The map label for this gene is rfaB [C]

Identifier: 77460064

GI number: 77460064

Start: 4344493

End: 4345569

Strand: Reverse

Name: rfaB [C]

Synonym: Pfl01_3843

Alternate gene names: 77460064

Gene position: 4345569-4344493 (Counterclockwise)

Preceding gene: 77460065

Following gene: 77460063

Centisome position: 67.49

GC content: 60.72

Gene sequence:

>1077_bases
GTGAAAAAAATACTGCACGTGGCGGAAACGATCAAAGGTGGGGTGGCGACGGTCATCCGCACGATTTCGGCGGCTCCCGA
AGACGGGCGCTATGAGCTGGTGTATCTGGTCCCGCTCGACCAGAAGAAAGAACTGCATGGCATCGATCCACAGCAGATCC
GCACCTTCGCCCGAAGCGGGCGGAATGTGCCGTCGCTGCTGCGTTTCGCCTGGCAACTGGCGCGGGTCCTGCTCAAGGAA
AAACCTGATGTGGTGCATCTGCACAGCACCTTTTCCGGGGTGATCGGCCGTTGCGTGTGCGTGCTCCTGCGGCCATGGCG
CAAGCCGAAAATCGTCTACTGCCCGCATGCGTTTTCGTTCCTGATGGAAAGCTCGCCGATCAAGCAGAAGGTCTATGCGG
GGATCGAGCGCGTGCTGCAGAAGGTCACGGACAAGATCATCTGTGTCAGCCAATTCGAGCTGGACAAGGCCGCGAAGTTT
GGCATCGAGCGCCAGCGCATGACGTTGATCTACAACGGCATCGACCACAAGGATGAAGAACGCAAAGTCGTTGATCCGGC
ACCGATTCATCTGCTGTTCGTCGGTCGCCTCGACTACCAGAAAGGCTTCGACGTATTGCTCAAGGCCTACAGCGAAGCAC
AGCGCAGCGACCTGAGACTGACGGTGGTGGGCAGCGCGGTGAACGAGGACGTCGTCGAATGTCCACCGCTGGACGGGGTG
GAATACCTGCCCTGGGTGACGCCAACCGAGGTGCACGCGCTGTATCGGAAAGCCGATGCGCTGATCGTCCCGAGCCGCTG
GGAAGGCTTTGCCATGGTGCCGCTGGAAGGCATGGCGCTGGGCCTGCCGGTGATCGCCAGCGACTGCACCTCGTTGCCCG
AACTGGTCACCCATGGTGTGTCCGGTTACGTGTTCCCCGCCGGTGACCACCAGGCGCTGGCCGAGCGCCTGAAGAAAATC
CAGAAGCCTGCGTTGTCGGCCCTCGGCATCGAAGGTCGGCGCATCGTCCGCGAGCGTTTCAGCGCCGCGTTGATGATCCG
CCAGACCTACGACGTGTATTCCGCTCCCTCTTATTAA

Upstream 100 bases:

>100_bases
CCAGCTATTACGGCAACGGCAGCTATTACAACTACGAATACGCGTCCGACCAGTCCTGAATCTCAGCGACGGTCCTTACA
GGCATGAAAGTGGGTGGGTT

Downstream 100 bases:

>100_bases
GTAGAACTCCGCTCATGAACGTAACGATTTTGCATGGCTACAGTGCCTCCAATTCCGGCGATGGTCTGCTGGTCGACCTG
GCCATTGCGCTGGTGCAGCG

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: ORF7 [H]

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MKKILHVAETIKGGVATVIRTISAAPEDGRYELVYLVPLDQKKELHGIDPQQIRTFARSGRNVPSLLRFAWQLARVLLKE
KPDVVHLHSTFSGVIGRCVCVLLRPWRKPKIVYCPHAFSFLMESSPIKQKVYAGIERVLQKVTDKIICVSQFELDKAAKF
GIERQRMTLIYNGIDHKDEERKVVDPAPIHLLFVGRLDYQKGFDVLLKAYSEAQRSDLRLTVVGSAVNEDVVECPPLDGV
EYLPWVTPTEVHALYRKADALIVPSRWEGFAMVPLEGMALGLPVIASDCTSLPELVTHGVSGYVFPAGDHQALAERLKKI
QKPALSALGIEGRRIVRERFSAALMIRQTYDVYSAPSY

Sequences:

>Translated_358_residues
MKKILHVAETIKGGVATVIRTISAAPEDGRYELVYLVPLDQKKELHGIDPQQIRTFARSGRNVPSLLRFAWQLARVLLKE
KPDVVHLHSTFSGVIGRCVCVLLRPWRKPKIVYCPHAFSFLMESSPIKQKVYAGIERVLQKVTDKIICVSQFELDKAAKF
GIERQRMTLIYNGIDHKDEERKVVDPAPIHLLFVGRLDYQKGFDVLLKAYSEAQRSDLRLTVVGSAVNEDVVECPPLDGV
EYLPWVTPTEVHALYRKADALIVPSRWEGFAMVPLEGMALGLPVIASDCTSLPELVTHGVSGYVFPAGDHQALAERLKKI
QKPALSALGIEGRRIVRERFSAALMIRQTYDVYSAPSY
>Mature_358_residues
MKKILHVAETIKGGVATVIRTISAAPEDGRYELVYLVPLDQKKELHGIDPQQIRTFARSGRNVPSLLRFAWQLARVLLKE
KPDVVHLHSTFSGVIGRCVCVLLRPWRKPKIVYCPHAFSFLMESSPIKQKVYAGIERVLQKVTDKIICVSQFELDKAAKF
GIERQRMTLIYNGIDHKDEERKVVDPAPIHLLFVGRLDYQKGFDVLLKAYSEAQRSDLRLTVVGSAVNEDVVECPPLDGV
EYLPWVTPTEVHALYRKADALIVPSRWEGFAMVPLEGMALGLPVIASDCTSLPELVTHGVSGYVFPAGDHQALAERLKKI
QKPALSALGIEGRRIVRERFSAALMIRQTYDVYSAPSY

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 40167; Mature: 40167

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILHVAETIKGGVATVIRTISAAPEDGRYELVYLVPLDQKKELHGIDPQQIRTFARSG
CCHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCC
RNVPSLLRFAWQLARVLLKEKPDVVHLHSTFSGVIGRCVCVLLRPWRKPKIVYCPHAFSF
CCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHH
LMESSPIKQKVYAGIERVLQKVTDKIICVSQFELDKAAKFGIERQRMTLIYNGIDHKDEE
HHCCCCHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHCCCHHHEEEEECCCCCCCCC
RKVVDPAPIHLLFVGRLDYQKGFDVLLKAYSEAQRSDLRLTVVGSAVNEDVVECPPLDGV
CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCC
EYLPWVTPTEVHALYRKADALIVPSRWEGFAMVPLEGMALGLPVIASDCTSLPELVTHGV
CCCCCCCHHHHHHHHHHCCEEEECCCCCCEEEECCCCHHCCCHHHHHHHHHHHHHHHCCC
SGYVFPAGDHQALAERLKKIQKPALSALGIEGRRIVRERFSAALMIRQTYDVYSAPSY
CCEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKKILHVAETIKGGVATVIRTISAAPEDGRYELVYLVPLDQKKELHGIDPQQIRTFARSG
CCHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCC
RNVPSLLRFAWQLARVLLKEKPDVVHLHSTFSGVIGRCVCVLLRPWRKPKIVYCPHAFSF
CCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHH
LMESSPIKQKVYAGIERVLQKVTDKIICVSQFELDKAAKFGIERQRMTLIYNGIDHKDEE
HHCCCCHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHCCCHHHEEEEECCCCCCCCC
RKVVDPAPIHLLFVGRLDYQKGFDVLLKAYSEAQRSDLRLTVVGSAVNEDVVECPPLDGV
CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCC
EYLPWVTPTEVHALYRKADALIVPSRWEGFAMVPLEGMALGLPVIASDCTSLPELVTHGV
CCCCCCCHHHHHHHHHHCCEEEECCCCCCEEEECCCCHHCCCHHHHHHHHHHHHHHHCCC
SGYVFPAGDHQALAERLKKIQKPALSALGIEGRRIVRERFSAALMIRQTYDVYSAPSY
CCEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7896702 [H]