| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460058
Identifier: 77460058
GI number: 77460058
Start: 4338826
End: 4339974
Strand: Reverse
Name: 77460058
Synonym: Pfl01_3837
Alternate gene names: NA
Gene position: 4339974-4338826 (Counterclockwise)
Preceding gene: 77460059
Following gene: 77460056
Centisome position: 67.41
GC content: 63.62
Gene sequence:
>1149_bases ATGCTGGCTGTTGATGAGGTGCCGCCGGTGGCGGCGTCGGTGGTGCAGGTCGGTGACGCCCGCGAGCGTTTTGGCCAGTG GCGCGAAGGCAAGGCCGGCAAGGTGTTGTCGATCTCGGTGATCGGTGACAGCTACAGCGCCGGGCAGGATTTCTACCTGA ACAAACTGGTGCAACGCGTGGCCGGGGAGGTCGGGTTTGCCGGGCCGGGGTATGTCGGGTTCAACCACGGCGCAGCGCTG GGCGGCACGCACTTCAAGTACACCCGCAGCAGCGAAAAATACTTCGGCGGTGACTGGCAGGTCTCCGGCCTCGGCCAGGC CAGCCCCGACAGCCGCACGGTGACCGGCCACCCCGGCGCCTGGCTGCAAGTCGAGGCCAGCCCGACGCCTGCCATCAACA CCGCCGTCACTCAGGCGAAACTGCTCTACCTCGGCAACGGTGAGTCCAGTGAGTTGCGTTATCGCTGGTCACCCTCCGCC GACTGGCAACCGTTGAAACTCGCGAGCGAGGGCGTACAGGAAGTCCCGCTGCCCGGTACGTCGGCCGCGACCGATTGGGC CTTCAGGCTTGAAGTGGTAAAAGGCGCGCCGACCCTGTTCGGTCTGTGGCTGAGCAACGATCAGAACGGGGTTCGGGTAT CGAAACTGGCGGCGTCCGGCGCGGCGTCCGCTGATTTCTATCACGACGATGCTCGCTGGCAGGCGCAGTGGAAAGCCGTT GTATCGAAGATTCCCGCAGACATTTACCTGATCATGCTCGGTGGCAACGATCAGGGTTTCGGCGTGAAGCCCGAGCAGTA TCTGCATAACGTTCAGGGGCTGGTCGGCATGCTCCGCGAGATTCAGCCGGCGGCGAGCATCAACCTGATCCTGCGTCAGG ACACCACCCGCTCCAGCGCCTATCCGATGTCGGCTTATGCGCAGGTCATCGAACCCTGGGCCCGTGCGCAGCATCTGGGT TATGCCAATCTGCAATGCGCGTTTGGCACCGACGTCAAACGCTACGCCGCCGCGATGATCGGGCCGGACAAGATTCATCC GCTGCCGGCCACGGGCGGGCGGGTGATTGCCGATTACTTCTATCGTTGGGTCGTGGGCGGGCAACAAAAAGTCTCGCCAC AGGACAGCTGTGGCGAGACTTCGAAGTAG
Upstream 100 bases:
>100_bases CTTCACTTCAGTGTTGTTTCTCGGCGAACGTGCGGCGACGAAAAAGAAACCGGCGGCAACCATCGCTCCGGTGGCGCAGA CCCGATGAAGGAAGCGATTC
Downstream 100 bases:
>100_bases CCGTCAGTTATCGAACAGATCCAGATGGCTCAGCAGCTCTGCGGTTTTCTGCGGCATCAACTGCGTCACGCAACGGGTTT CCACGTTGACGATGATCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MLAVDEVPPVAASVVQVGDARERFGQWREGKAGKVLSISVIGDSYSAGQDFYLNKLVQRVAGEVGFAGPGYVGFNHGAAL GGTHFKYTRSSEKYFGGDWQVSGLGQASPDSRTVTGHPGAWLQVEASPTPAINTAVTQAKLLYLGNGESSELRYRWSPSA DWQPLKLASEGVQEVPLPGTSAATDWAFRLEVVKGAPTLFGLWLSNDQNGVRVSKLAASGAASADFYHDDARWQAQWKAV VSKIPADIYLIMLGGNDQGFGVKPEQYLHNVQGLVGMLREIQPAASINLILRQDTTRSSAYPMSAYAQVIEPWARAQHLG YANLQCAFGTDVKRYAAAMIGPDKIHPLPATGGRVIADYFYRWVVGGQQKVSPQDSCGETSK
Sequences:
>Translated_382_residues MLAVDEVPPVAASVVQVGDARERFGQWREGKAGKVLSISVIGDSYSAGQDFYLNKLVQRVAGEVGFAGPGYVGFNHGAAL GGTHFKYTRSSEKYFGGDWQVSGLGQASPDSRTVTGHPGAWLQVEASPTPAINTAVTQAKLLYLGNGESSELRYRWSPSA DWQPLKLASEGVQEVPLPGTSAATDWAFRLEVVKGAPTLFGLWLSNDQNGVRVSKLAASGAASADFYHDDARWQAQWKAV VSKIPADIYLIMLGGNDQGFGVKPEQYLHNVQGLVGMLREIQPAASINLILRQDTTRSSAYPMSAYAQVIEPWARAQHLG YANLQCAFGTDVKRYAAAMIGPDKIHPLPATGGRVIADYFYRWVVGGQQKVSPQDSCGETSK >Mature_382_residues MLAVDEVPPVAASVVQVGDARERFGQWREGKAGKVLSISVIGDSYSAGQDFYLNKLVQRVAGEVGFAGPGYVGFNHGAAL GGTHFKYTRSSEKYFGGDWQVSGLGQASPDSRTVTGHPGAWLQVEASPTPAINTAVTQAKLLYLGNGESSELRYRWSPSA DWQPLKLASEGVQEVPLPGTSAATDWAFRLEVVKGAPTLFGLWLSNDQNGVRVSKLAASGAASADFYHDDARWQAQWKAV VSKIPADIYLIMLGGNDQGFGVKPEQYLHNVQGLVGMLREIQPAASINLILRQDTTRSSAYPMSAYAQVIEPWARAQHLG YANLQCAFGTDVKRYAAAMIGPDKIHPLPATGGRVIADYFYRWVVGGQQKVSPQDSCGETSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41168; Mature: 41168
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAVDEVPPVAASVVQVGDARERFGQWREGKAGKVLSISVIGDSYSAGQDFYLNKLVQRV CCCCCCCCCHHHHHHHHCCHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHH AGEVGFAGPGYVGFNHGAALGGTHFKYTRSSEKYFGGDWQVSGLGQASPDSRTVTGHPGA HHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCEEECCCCC WLQVEASPTPAINTAVTQAKLLYLGNGESSELRYRWSPSADWQPLKLASEGVQEVPLPGT EEEEECCCCCCHHHHHCEEEEEEEECCCCCCEEEEECCCCCCCCHHHHHCCHHHCCCCCC SAATDWAFRLEVVKGAPTLFGLWLSNDQNGVRVSKLAASGAASADFYHDDARWQAQWKAV CCCCCEEEEEEEECCCCEEEEEEECCCCCCEEEEEEHHCCCCCCCEECCCCHHHHHHHHH VSKIPADIYLIMLGGNDQGFGVKPEQYLHNVQGLVGMLREIQPAASINLILRQDTTRSSA HHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC YPMSAYAQVIEPWARAQHLGYANLQCAFGTDVKRYAAAMIGPDKIHPLPATGGRVIADYF CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHH YRWVVGGQQKVSPQDSCGETSK HHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLAVDEVPPVAASVVQVGDARERFGQWREGKAGKVLSISVIGDSYSAGQDFYLNKLVQRV CCCCCCCCCHHHHHHHHCCHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHH AGEVGFAGPGYVGFNHGAALGGTHFKYTRSSEKYFGGDWQVSGLGQASPDSRTVTGHPGA HHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCEEECCCCC WLQVEASPTPAINTAVTQAKLLYLGNGESSELRYRWSPSADWQPLKLASEGVQEVPLPGT EEEEECCCCCCHHHHHCEEEEEEEECCCCCCEEEEECCCCCCCCHHHHHCCHHHCCCCCC SAATDWAFRLEVVKGAPTLFGLWLSNDQNGVRVSKLAASGAASADFYHDDARWQAQWKAV CCCCCEEEEEEEECCCCEEEEEEECCCCCCEEEEEEHHCCCCCCCEECCCCHHHHHHHHH VSKIPADIYLIMLGGNDQGFGVKPEQYLHNVQGLVGMLREIQPAASINLILRQDTTRSSA HHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC YPMSAYAQVIEPWARAQHLGYANLQCAFGTDVKRYAAAMIGPDKIHPLPATGGRVIADYF CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHH YRWVVGGQQKVSPQDSCGETSK HHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA