Click here to switch to the map view.

The map label for this gene is yjbH [H]

Identifier: 77460052

GI number: 77460052

Start: 4330956

End: 4333034

Strand: Reverse

Name: yjbH [H]

Synonym: Pfl01_3830

Alternate gene names: 77460052

Gene position: 4333034-4330956 (Counterclockwise)

Preceding gene: 77460053

Following gene: 77460048

Centisome position: 67.3

GC content: 61.42

Gene sequence:

>2079_bases
TTGAATTTGCGTTTTGCAGCTGTGTTGTTATTGCCGTGTGGCCTGGTGCATGCCGAGCCTCGGATTACCCAGAATGACTT
CGGCGGCGTCGGTCTGTTGCAGACCCCGACCGCGCGCATGTCGCCCGCCGGTGAGTTGAGCGTCAACGCCAACCGCACCG
AACCGTACAGCCGATACAGCGTTTCGTTGCAGCCGCTCGACTGGCTGGAAGGTTCGTTTCGCTACACCGCCATCACCAAC
CGTCCGTACGGTTCCGAAGCGCTGAGCGGCAGCCAGAGCTATAAGGACAAGGCGGTCGACGCCAAGGTCCGGCTGTGGCA
GGAAAGCCACTGGGCGCCGGAAGTGGCGCTGGGCTTTCGAGACATCGGCGGTACCGGTCTGTTTGCCAGTGAATTCTTCG
TGGCCAACAAGCGCTGGGACAATTTCGATTTCAGCGCCGGCATCGCCTGGGGTTACATCGGCAATCGCGGCGATGTCGAT
AACCCGTTGGGTTCGATCAGTGACCGCTTCAACACTCGCCCTGATCTGGAAGGCACCGGTGACGTCAACGCCGGCTCGTA
CTTTCGCGGCAAGCCGTCGTTTTTCGGCGGTGTGAGTTACCAGACGCCCTGGGACCGTCTCAGTCTGAAGCTCGAATACG
AAGGCAACGACTACAAGCACGAGCCCAAGGACAACATCATCAAGCAGGACTCGCCGATCAACCTCGGCGCGGTGTTCAAG
GTGACCGATTCAGTCGATGTGAGTGCGGCCTGGGAACGCGGCAACACGGCGATGTTCGGCATCACGTTCCACACCAATTT
CGTCAGTCGCAAGGCCCCGGCCAAGACCTTTGATCCGCCGGCCGAACCGCTGCCGGCGAAGGCGCCGACCGCGTCCATGG
AAGAGGTCAACTGGGCCGACGTGTCGCGCCGTTTGCAGCAGAACGCCGGCTACAAGGTCGAACGCATCACCCAGCGCGAT
TCCGAACTGATCGTGTACGGCGAGCAGCAGCGCTATTTCCATTCGCCGAAGGCTGTCGGCCGCGCGAGCCGGATCCTCGA
CAACAGCGTCAACGACGACATCGACTGGTTCACCGTGGTCAACAAGCGCTACGACCTGCCGCTGGAAGAAACCAGCGTGC
CCCGGCAGACATTCCGCGAAGTGATCAACAACGAAGAGCCTCTGGAGTCGCTGCACCGCACCACCGAGATCAACCCGGCG
ATGCCGCGCAACGAGAAAACCCTCTACACCGAGGCGCCGCAGCACTTCAATTACGGCGTCGGCCTGGGCTTCAAACAGAA
CGTCGGCGGCCCCGATGGTTTGCTCTATCAGTTCACGGCGGATCTGGACGCCGAGTACCGCTTCAACCGCAACACCTGGT
GGAACGGTCTGCTGAGTCAGAACCTGATCAACAACTTCGACAAGTTCACCTACGACGCGCCCAGCGGCCTGCCGCGTGTG
CGCACCGACTTGCGTCAGTACCTGACCACGTCGGACACCACCATGCCGCTGTTCCAGGTCAGCCACGCCGAGCAACTGGA
CAAGGATTTGTACGGCATGGTCTACGGCGGTTATCTGGAGTCGATGTTCGCCGGGGTCGGGGGCGAGGTGCTGTTTCGCC
CGACCGGCAAGCGCTGGTCGATTGGTGCGGACCTGAACTACGTGCGTCAGCGTGAGTTCGACCAGGGTTTCGGCCTGCGT
GATTACTCGGTCTGGACCGGCCACATCACCGGCTACACCGACCTGCCGTTCGACACGCTGGCCGCAGTCAGCGTCGGGCG
TTACCTGGCGGGCGACTTTGGCGGCACGGTGGATATCTCCCGCGAGTTCTTCAACGGCGTACGCTTTGGCGCCTGGGCGA
CCATTACCACCGCCGGCAGCGCCGAGTATGGTGAGGGTAGTTTCGACAAGGGGCTGTATTTGTCGATTCCGTTCGACGAA
ATGATGAGCATGTCGACCATGCGCCGCGCCAACCTGGTGTGGGCACCGCTGACCCGTGACGGTGGCGCGCGGCTCAACCG
AAGCTTCCAGCTGCATTCGATGACGGACAGTCGGGAAGGGGACATGTTCTACCGCAACTTCGGGAAGATTACCGAGTAG

Upstream 100 bases:

>100_bases
TTCTGGTGCCGGTGAAAAACGATGATCTGGATCCGCCTGTCCCTGAACTGAATCAGCAGTTGGCCGAATTGATTGCCACG
CAGTTGGCTGAGGTGGTTCG

Downstream 100 bases:

>100_bases
GTTCGGGGGAGCGGGGAGTTAAAGCGGGAGCCTGTGGGCTCCCGTTTTCGTTTGTGGTGAAGGGTGATCTTGATACAGCC
ATGATTGCGGTGGGAGTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 692; Mature: 692

Protein sequence:

>692_residues
MNLRFAAVLLLPCGLVHAEPRITQNDFGGVGLLQTPTARMSPAGELSVNANRTEPYSRYSVSLQPLDWLEGSFRYTAITN
RPYGSEALSGSQSYKDKAVDAKVRLWQESHWAPEVALGFRDIGGTGLFASEFFVANKRWDNFDFSAGIAWGYIGNRGDVD
NPLGSISDRFNTRPDLEGTGDVNAGSYFRGKPSFFGGVSYQTPWDRLSLKLEYEGNDYKHEPKDNIIKQDSPINLGAVFK
VTDSVDVSAAWERGNTAMFGITFHTNFVSRKAPAKTFDPPAEPLPAKAPTASMEEVNWADVSRRLQQNAGYKVERITQRD
SELIVYGEQQRYFHSPKAVGRASRILDNSVNDDIDWFTVVNKRYDLPLEETSVPRQTFREVINNEEPLESLHRTTEINPA
MPRNEKTLYTEAPQHFNYGVGLGFKQNVGGPDGLLYQFTADLDAEYRFNRNTWWNGLLSQNLINNFDKFTYDAPSGLPRV
RTDLRQYLTTSDTTMPLFQVSHAEQLDKDLYGMVYGGYLESMFAGVGGEVLFRPTGKRWSIGADLNYVRQREFDQGFGLR
DYSVWTGHITGYTDLPFDTLAAVSVGRYLAGDFGGTVDISREFFNGVRFGAWATITTAGSAEYGEGSFDKGLYLSIPFDE
MMSMSTMRRANLVWAPLTRDGGARLNRSFQLHSMTDSREGDMFYRNFGKITE

Sequences:

>Translated_692_residues
MNLRFAAVLLLPCGLVHAEPRITQNDFGGVGLLQTPTARMSPAGELSVNANRTEPYSRYSVSLQPLDWLEGSFRYTAITN
RPYGSEALSGSQSYKDKAVDAKVRLWQESHWAPEVALGFRDIGGTGLFASEFFVANKRWDNFDFSAGIAWGYIGNRGDVD
NPLGSISDRFNTRPDLEGTGDVNAGSYFRGKPSFFGGVSYQTPWDRLSLKLEYEGNDYKHEPKDNIIKQDSPINLGAVFK
VTDSVDVSAAWERGNTAMFGITFHTNFVSRKAPAKTFDPPAEPLPAKAPTASMEEVNWADVSRRLQQNAGYKVERITQRD
SELIVYGEQQRYFHSPKAVGRASRILDNSVNDDIDWFTVVNKRYDLPLEETSVPRQTFREVINNEEPLESLHRTTEINPA
MPRNEKTLYTEAPQHFNYGVGLGFKQNVGGPDGLLYQFTADLDAEYRFNRNTWWNGLLSQNLINNFDKFTYDAPSGLPRV
RTDLRQYLTTSDTTMPLFQVSHAEQLDKDLYGMVYGGYLESMFAGVGGEVLFRPTGKRWSIGADLNYVRQREFDQGFGLR
DYSVWTGHITGYTDLPFDTLAAVSVGRYLAGDFGGTVDISREFFNGVRFGAWATITTAGSAEYGEGSFDKGLYLSIPFDE
MMSMSTMRRANLVWAPLTRDGGARLNRSFQLHSMTDSREGDMFYRNFGKITE
>Mature_692_residues
MNLRFAAVLLLPCGLVHAEPRITQNDFGGVGLLQTPTARMSPAGELSVNANRTEPYSRYSVSLQPLDWLEGSFRYTAITN
RPYGSEALSGSQSYKDKAVDAKVRLWQESHWAPEVALGFRDIGGTGLFASEFFVANKRWDNFDFSAGIAWGYIGNRGDVD
NPLGSISDRFNTRPDLEGTGDVNAGSYFRGKPSFFGGVSYQTPWDRLSLKLEYEGNDYKHEPKDNIIKQDSPINLGAVFK
VTDSVDVSAAWERGNTAMFGITFHTNFVSRKAPAKTFDPPAEPLPAKAPTASMEEVNWADVSRRLQQNAGYKVERITQRD
SELIVYGEQQRYFHSPKAVGRASRILDNSVNDDIDWFTVVNKRYDLPLEETSVPRQTFREVINNEEPLESLHRTTEINPA
MPRNEKTLYTEAPQHFNYGVGLGFKQNVGGPDGLLYQFTADLDAEYRFNRNTWWNGLLSQNLINNFDKFTYDAPSGLPRV
RTDLRQYLTTSDTTMPLFQVSHAEQLDKDLYGMVYGGYLESMFAGVGGEVLFRPTGKRWSIGADLNYVRQREFDQGFGLR
DYSVWTGHITGYTDLPFDTLAAVSVGRYLAGDFGGTVDISREFFNGVRFGAWATITTAGSAEYGEGSFDKGLYLSIPFDE
MMSMSTMRRANLVWAPLTRDGGARLNRSFQLHSMTDSREGDMFYRNFGKITE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ymcA [H]

Homologues:

Organism=Escherichia coli, GI1790461, Length=670, Percent_Identity=43.134328358209, Blast_Score=507, Evalue=1e-144,
Organism=Escherichia coli, GI1787219, Length=672, Percent_Identity=40.922619047619, Blast_Score=489, Evalue=1e-139,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010344 [H]

Pfam domain/function: PF06082 DUF940 [H]

EC number: NA

Molecular weight: Translated: 77795; Mature: 77795

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLRFAAVLLLPCGLVHAEPRITQNDFGGVGLLQTPTARMSPAGELSVNANRTEPYSRYS
CCCHHEEHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCCEEE
VSLQPLDWLEGSFRYTAITNRPYGSEALSGSQSYKDKAVDAKVRLWQESHWAPEVALGFR
EEECCHHHCCCCEEEEEEECCCCCCHHHCCCCHHHHHHCCHHHEEEHHCCCCCEEEECEE
DIGGTGLFASEFFVANKRWDNFDFSAGIAWGYIGNRGDVDNPLGSISDRFNTRPDLEGTG
CCCCCCEEHHHEEEECCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCC
DVNAGSYFRGKPSFFGGVSYQTPWDRLSLKLEYEGNDYKHEPKDNIIKQDSPINLGAVFK
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE
VTDSVDVSAAWERGNTAMFGITFHTNFVSRKAPAKTFDPPAEPLPAKAPTASMEEVNWAD
EECCCCEEEEECCCCEEEEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHH
VSRRLQQNAGYKVERITQRDSELIVYGEQQRYFHSPKAVGRASRILDNSVNDDIDWFTVV
HHHHHHHCCCCEEEEHHCCCCEEEEEECHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEE
NKRYDLPLEETSVPRQTFREVINNEEPLESLHRTTEINPAMPRNEKTLYTEAPQHFNYGV
CCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCC
GLGFKQNVGGPDGLLYQFTADLDAEYRFNRNTWWNGLLSQNLINNFDKFTYDAPSGLPRV
CCCCCCCCCCCCCEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHEECCCCCCCHHH
RTDLRQYLTTSDTTMPLFQVSHAEQLDKDLYGMVYGGYLESMFAGVGGEVLFRPTGKRWS
HHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEE
IGADLNYVRQREFDQGFGLRDYSVWTGHITGYTDLPFDTLAAVSVGRYLAGDFGGTVDIS
ECCCHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEC
REFFNGVRFGAWATITTAGSAEYGEGSFDKGLYLSIPFDEMMSMSTMRRANLVWAPLTRD
HHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHCCEEEEECCCC
GGARLNRSFQLHSMTDSREGDMFYRNFGKITE
CCCCCCCEEEEEECCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MNLRFAAVLLLPCGLVHAEPRITQNDFGGVGLLQTPTARMSPAGELSVNANRTEPYSRYS
CCCHHEEHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCCEEE
VSLQPLDWLEGSFRYTAITNRPYGSEALSGSQSYKDKAVDAKVRLWQESHWAPEVALGFR
EEECCHHHCCCCEEEEEEECCCCCCHHHCCCCHHHHHHCCHHHEEEHHCCCCCEEEECEE
DIGGTGLFASEFFVANKRWDNFDFSAGIAWGYIGNRGDVDNPLGSISDRFNTRPDLEGTG
CCCCCCEEHHHEEEECCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCC
DVNAGSYFRGKPSFFGGVSYQTPWDRLSLKLEYEGNDYKHEPKDNIIKQDSPINLGAVFK
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE
VTDSVDVSAAWERGNTAMFGITFHTNFVSRKAPAKTFDPPAEPLPAKAPTASMEEVNWAD
EECCCCEEEEECCCCEEEEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHH
VSRRLQQNAGYKVERITQRDSELIVYGEQQRYFHSPKAVGRASRILDNSVNDDIDWFTVV
HHHHHHHCCCCEEEEHHCCCCEEEEEECHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEE
NKRYDLPLEETSVPRQTFREVINNEEPLESLHRTTEINPAMPRNEKTLYTEAPQHFNYGV
CCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCC
GLGFKQNVGGPDGLLYQFTADLDAEYRFNRNTWWNGLLSQNLINNFDKFTYDAPSGLPRV
CCCCCCCCCCCCCEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHEECCCCCCCHHH
RTDLRQYLTTSDTTMPLFQVSHAEQLDKDLYGMVYGGYLESMFAGVGGEVLFRPTGKRWS
HHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEE
IGADLNYVRQREFDQGFGLRDYSVWTGHITGYTDLPFDTLAAVSVGRYLAGDFGGTVDIS
ECCCHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEC
REFFNGVRFGAWATITTAGSAEYGEGSFDKGLYLSIPFDEMMSMSTMRRANLVWAPLTRD
HHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHCCEEEEECCCC
GGARLNRSFQLHSMTDSREGDMFYRNFGKITE
CCCCCCCEEEEEECCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]