Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77460042

Identifier: 77460042

GI number: 77460042

Start: 4319894

End: 4320613

Strand: Direct

Name: 77460042

Synonym: Pfl01_3820

Alternate gene names: NA

Gene position: 4319894-4320613 (Clockwise)

Preceding gene: 77460041

Following gene: 77460046

Centisome position: 67.1

GC content: 45.69

Gene sequence:

>720_bases
ATGAAGGGAAAAACCATCGCAACTTTTCTTGCATGCTTGCTGCTCGCCGGTTGTTCTGACCCAAAGCAAACCAAACTGCC
TGCCGATATCAGTAAATGGTCAGAGGACAAAGGGCTAATGGAAGCTGTCGGCAAACTCGATGAAAACGATAGAAAACTGT
TTGGTGGCTATGCTGCCCGGCAAGTGGTGGCCAGCACATTTGGCGGTAGCAAAGTTGTTGCAGACTCAACACTGGGTGAT
GCTCTGAAAACACAACAGGCCTGGATCGAAGCCAAAGCTGCCGAAGCGGAAAAACAAAAAGCCCTGGCCGAGCAAGTAAA
ACAGCAACAGCTTGTGGCACTGAAAGAAATGAACGGAACGCTTACAGCGTCCCTTCTCAAACTTAAACTGAATCCCGCCG
ACTATAAAAACAAGCAATACAGTGAATATTTTTCAATTGAAATTGCTCTACACAACAATACAACTGAGGCCCTATCTGGC
GTAAAGGGAACAGTAGTACTCAGCGACATGTTCGGCGACCCTATAAAAAGAATTGGCCTCACTAACGACATCCAAATTGA
CCCAGGTCAAACGTACATCTATAGCGGGACAATGGATTACAACCAGTTTCAGGCCGCCGACAAGAAGTTGGCTGCTTCCG
ATACAGAAAAAATGAAATTTGAATGGGTGCCTGACACTTATATTTTCACCAATGGCAAAAAGCAAACAATGCCAAACTGA

Upstream 100 bases:

>100_bases
CGTCGCAACTGGAACGATTGCATCACCCTTTTTTTCTTGAGCTATACTCGTAAACAAACACACAACCAAGTAAAAACATA
ATTATCTTAAGGACTGATAC

Downstream 100 bases:

>100_bases
AGCTGAGAAAATGAGAGCAGGGACGAACTTAATACGGAAGATCGAAAATAAATATATCCATCCCTTTTCCCTTTACACCA
ACTCACTCAAAATTTAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MKGKTIATFLACLLLAGCSDPKQTKLPADISKWSEDKGLMEAVGKLDENDRKLFGGYAARQVVASTFGGSKVVADSTLGD
ALKTQQAWIEAKAAEAEKQKALAEQVKQQQLVALKEMNGTLTASLLKLKLNPADYKNKQYSEYFSIEIALHNNTTEALSG
VKGTVVLSDMFGDPIKRIGLTNDIQIDPGQTYIYSGTMDYNQFQAADKKLAASDTEKMKFEWVPDTYIFTNGKKQTMPN

Sequences:

>Translated_239_residues
MKGKTIATFLACLLLAGCSDPKQTKLPADISKWSEDKGLMEAVGKLDENDRKLFGGYAARQVVASTFGGSKVVADSTLGD
ALKTQQAWIEAKAAEAEKQKALAEQVKQQQLVALKEMNGTLTASLLKLKLNPADYKNKQYSEYFSIEIALHNNTTEALSG
VKGTVVLSDMFGDPIKRIGLTNDIQIDPGQTYIYSGTMDYNQFQAADKKLAASDTEKMKFEWVPDTYIFTNGKKQTMPN
>Mature_239_residues
MKGKTIATFLACLLLAGCSDPKQTKLPADISKWSEDKGLMEAVGKLDENDRKLFGGYAARQVVASTFGGSKVVADSTLGD
ALKTQQAWIEAKAAEAEKQKALAEQVKQQQLVALKEMNGTLTASLLKLKLNPADYKNKQYSEYFSIEIALHNNTTEALSG
VKGTVVLSDMFGDPIKRIGLTNDIQIDPGQTYIYSGTMDYNQFQAADKKLAASDTEKMKFEWVPDTYIFTNGKKQTMPN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26221; Mature: 26221

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGKTIATFLACLLLAGCSDPKQTKLPADISKWSEDKGLMEAVGKLDENDRKLFGGYAAR
CCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHH
QVVASTFGGSKVVADSTLGDALKTQQAWIEAKAAEAEKQKALAEQVKQQQLVALKEMNGT
HHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LTASLLKLKLNPADYKNKQYSEYFSIEIALHNNTTEALSGVKGTVVLSDMFGDPIKRIGL
EEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCHHHHCCCCCEEEEECHHCCHHHHCCC
TNDIQIDPGQTYIYSGTMDYNQFQAADKKLAASDTEKMKFEWVPDTYIFTNGKKQTMPN
CCCEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCHHEEEEECCCEEEEECCCCCCCCC
>Mature Secondary Structure
MKGKTIATFLACLLLAGCSDPKQTKLPADISKWSEDKGLMEAVGKLDENDRKLFGGYAAR
CCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHH
QVVASTFGGSKVVADSTLGDALKTQQAWIEAKAAEAEKQKALAEQVKQQQLVALKEMNGT
HHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LTASLLKLKLNPADYKNKQYSEYFSIEIALHNNTTEALSGVKGTVVLSDMFGDPIKRIGL
EEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCHHHHCCCCCEEEEECHHCCHHHHCCC
TNDIQIDPGQTYIYSGTMDYNQFQAADKKLAASDTEKMKFEWVPDTYIFTNGKKQTMPN
CCCEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCHHEEEEECCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA