| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460042
Identifier: 77460042
GI number: 77460042
Start: 4319894
End: 4320613
Strand: Direct
Name: 77460042
Synonym: Pfl01_3820
Alternate gene names: NA
Gene position: 4319894-4320613 (Clockwise)
Preceding gene: 77460041
Following gene: 77460046
Centisome position: 67.1
GC content: 45.69
Gene sequence:
>720_bases ATGAAGGGAAAAACCATCGCAACTTTTCTTGCATGCTTGCTGCTCGCCGGTTGTTCTGACCCAAAGCAAACCAAACTGCC TGCCGATATCAGTAAATGGTCAGAGGACAAAGGGCTAATGGAAGCTGTCGGCAAACTCGATGAAAACGATAGAAAACTGT TTGGTGGCTATGCTGCCCGGCAAGTGGTGGCCAGCACATTTGGCGGTAGCAAAGTTGTTGCAGACTCAACACTGGGTGAT GCTCTGAAAACACAACAGGCCTGGATCGAAGCCAAAGCTGCCGAAGCGGAAAAACAAAAAGCCCTGGCCGAGCAAGTAAA ACAGCAACAGCTTGTGGCACTGAAAGAAATGAACGGAACGCTTACAGCGTCCCTTCTCAAACTTAAACTGAATCCCGCCG ACTATAAAAACAAGCAATACAGTGAATATTTTTCAATTGAAATTGCTCTACACAACAATACAACTGAGGCCCTATCTGGC GTAAAGGGAACAGTAGTACTCAGCGACATGTTCGGCGACCCTATAAAAAGAATTGGCCTCACTAACGACATCCAAATTGA CCCAGGTCAAACGTACATCTATAGCGGGACAATGGATTACAACCAGTTTCAGGCCGCCGACAAGAAGTTGGCTGCTTCCG ATACAGAAAAAATGAAATTTGAATGGGTGCCTGACACTTATATTTTCACCAATGGCAAAAAGCAAACAATGCCAAACTGA
Upstream 100 bases:
>100_bases CGTCGCAACTGGAACGATTGCATCACCCTTTTTTTCTTGAGCTATACTCGTAAACAAACACACAACCAAGTAAAAACATA ATTATCTTAAGGACTGATAC
Downstream 100 bases:
>100_bases AGCTGAGAAAATGAGAGCAGGGACGAACTTAATACGGAAGATCGAAAATAAATATATCCATCCCTTTTCCCTTTACACCA ACTCACTCAAAATTTAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MKGKTIATFLACLLLAGCSDPKQTKLPADISKWSEDKGLMEAVGKLDENDRKLFGGYAARQVVASTFGGSKVVADSTLGD ALKTQQAWIEAKAAEAEKQKALAEQVKQQQLVALKEMNGTLTASLLKLKLNPADYKNKQYSEYFSIEIALHNNTTEALSG VKGTVVLSDMFGDPIKRIGLTNDIQIDPGQTYIYSGTMDYNQFQAADKKLAASDTEKMKFEWVPDTYIFTNGKKQTMPN
Sequences:
>Translated_239_residues MKGKTIATFLACLLLAGCSDPKQTKLPADISKWSEDKGLMEAVGKLDENDRKLFGGYAARQVVASTFGGSKVVADSTLGD ALKTQQAWIEAKAAEAEKQKALAEQVKQQQLVALKEMNGTLTASLLKLKLNPADYKNKQYSEYFSIEIALHNNTTEALSG VKGTVVLSDMFGDPIKRIGLTNDIQIDPGQTYIYSGTMDYNQFQAADKKLAASDTEKMKFEWVPDTYIFTNGKKQTMPN >Mature_239_residues MKGKTIATFLACLLLAGCSDPKQTKLPADISKWSEDKGLMEAVGKLDENDRKLFGGYAARQVVASTFGGSKVVADSTLGD ALKTQQAWIEAKAAEAEKQKALAEQVKQQQLVALKEMNGTLTASLLKLKLNPADYKNKQYSEYFSIEIALHNNTTEALSG VKGTVVLSDMFGDPIKRIGLTNDIQIDPGQTYIYSGTMDYNQFQAADKKLAASDTEKMKFEWVPDTYIFTNGKKQTMPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26221; Mature: 26221
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGKTIATFLACLLLAGCSDPKQTKLPADISKWSEDKGLMEAVGKLDENDRKLFGGYAAR CCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHH QVVASTFGGSKVVADSTLGDALKTQQAWIEAKAAEAEKQKALAEQVKQQQLVALKEMNGT HHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LTASLLKLKLNPADYKNKQYSEYFSIEIALHNNTTEALSGVKGTVVLSDMFGDPIKRIGL EEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCHHHHCCCCCEEEEECHHCCHHHHCCC TNDIQIDPGQTYIYSGTMDYNQFQAADKKLAASDTEKMKFEWVPDTYIFTNGKKQTMPN CCCEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCHHEEEEECCCEEEEECCCCCCCCC >Mature Secondary Structure MKGKTIATFLACLLLAGCSDPKQTKLPADISKWSEDKGLMEAVGKLDENDRKLFGGYAAR CCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHH QVVASTFGGSKVVADSTLGDALKTQQAWIEAKAAEAEKQKALAEQVKQQQLVALKEMNGT HHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LTASLLKLKLNPADYKNKQYSEYFSIEIALHNNTTEALSGVKGTVVLSDMFGDPIKRIGL EEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCHHHHCCCCCEEEEECHHCCHHHHCCC TNDIQIDPGQTYIYSGTMDYNQFQAADKKLAASDTEKMKFEWVPDTYIFTNGKKQTMPN CCCEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCHHEEEEECCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA