| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yaiW [H]
Identifier: 77459971
GI number: 77459971
Start: 4236609
End: 4237697
Strand: Reverse
Name: yaiW [H]
Synonym: Pfl01_3749
Alternate gene names: 77459971
Gene position: 4237697-4236609 (Counterclockwise)
Preceding gene: 77459973
Following gene: 77459958
Centisome position: 65.82
GC content: 64.65
Gene sequence:
>1089_bases ATGCACACCCCACGATTATTCGTCAGCCTCGCCGCGCTGCTGGTACTGGCCGGTTGCGCCGGTCAACGCAGCGAAGAACC GGCGCCGCGCCCGCCCGCCGAGGTCAAGGCGCAGATCGTGCGCCTGCTGCCGGCGAAAACCGTCGACCGCCAGGGCTGGG CCACTGACATCTACGCTGCTTTCGCCGCTCAGGGCATCAGCCCGACCACGCAGAATCTGTGTTCGGTGCTGGCCGTCACC GAGCAGGAATCCACCTTTCAGGTCGATCCGCCAGTGCCGGGCCTGGGCAAGATCGCCCGTGACGAAATCGACCGCCGCGC CGCCAAGGTGCATATCCCGAGCCTGTTGGTCAGCGGCGCCTTGCAGGTGCGTTCGCCGAACGGCAAGACCTATAGCGAAC GCCTGAGCGCCGCCCGCAGCGAAAAGGAATTGAGCGCGATTTTCGACGACTTCATCGGCTCGGTGCCGATGGGCCGGACA CTGTTCAGCGGTTTCAACCCGGTGCACACCGGCGGGCCGATGCAGGTCAGCATCGAATTCGCCGAGCAGCATGCCAAGGA CTATCCGTACCCGGTGGACGGGACGATTCGTCGCGAGGTGTTCAGCCGTCGCGGCGGCATGTATTTCGGCATCGCCCATT TGCTTGGTTATCCAGTGAGTTATCGCGAGCCGCTGTACCGCTTCGCCGACTTCAACGCCGGCTGGTACGCCAGTCGCAAT GCGGCGTTTCAGAACGCGGTCAGCCGGGCGTCGGGGATTCCGCTGGCGCTGGATGGCGACCTGATCCGCCCGGGCGCGAT CATGCCGGGCAGCACTGAACTGGCGGTGCGCACCCTCGGCAAATCCCTGGGCATGCGCAATCCGGTGATCCGCGATCAAC TGGAGAAGGGCGATAGCCTGGCCTTCGAGGAGACCAAACTGTATCAACGGGTCTTCGAACTGGCGGAGCGTGCGGAAGGC AAGACATTGCCCCGTGCGGTGCTGCCGGGCATCGTGCTGCAGAGCCCGAAGATCACCCGCAAACTGACCACGGCGTGGTT TGCCAAACGGGTCGACGAGCGTTATCGGCGCTGCATGGCCAAGGGCTGA
Upstream 100 bases:
>100_bases CAAACGGGGCGATGGAACAGCGCCGCTGGCCCGCAGTCCTATCCTGCACCCTGCGATTGAGCGTAGGGTTAACCCGGCTC AACGGACTGGATGAAGCGTT
Downstream 100 bases:
>100_bases GGACGATCAGACAGGCATAAAAAAACCCGGCTGACGGGAGCCGGGTTTTTTCTGGGTTGTTGCGATCAAGCCATTCATTC AGGCAACGCGGCGTTCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MHTPRLFVSLAALLVLAGCAGQRSEEPAPRPPAEVKAQIVRLLPAKTVDRQGWATDIYAAFAAQGISPTTQNLCSVLAVT EQESTFQVDPPVPGLGKIARDEIDRRAAKVHIPSLLVSGALQVRSPNGKTYSERLSAARSEKELSAIFDDFIGSVPMGRT LFSGFNPVHTGGPMQVSIEFAEQHAKDYPYPVDGTIRREVFSRRGGMYFGIAHLLGYPVSYREPLYRFADFNAGWYASRN AAFQNAVSRASGIPLALDGDLIRPGAIMPGSTELAVRTLGKSLGMRNPVIRDQLEKGDSLAFEETKLYQRVFELAERAEG KTLPRAVLPGIVLQSPKITRKLTTAWFAKRVDERYRRCMAKG
Sequences:
>Translated_362_residues MHTPRLFVSLAALLVLAGCAGQRSEEPAPRPPAEVKAQIVRLLPAKTVDRQGWATDIYAAFAAQGISPTTQNLCSVLAVT EQESTFQVDPPVPGLGKIARDEIDRRAAKVHIPSLLVSGALQVRSPNGKTYSERLSAARSEKELSAIFDDFIGSVPMGRT LFSGFNPVHTGGPMQVSIEFAEQHAKDYPYPVDGTIRREVFSRRGGMYFGIAHLLGYPVSYREPLYRFADFNAGWYASRN AAFQNAVSRASGIPLALDGDLIRPGAIMPGSTELAVRTLGKSLGMRNPVIRDQLEKGDSLAFEETKLYQRVFELAERAEG KTLPRAVLPGIVLQSPKITRKLTTAWFAKRVDERYRRCMAKG >Mature_362_residues MHTPRLFVSLAALLVLAGCAGQRSEEPAPRPPAEVKAQIVRLLPAKTVDRQGWATDIYAAFAAQGISPTTQNLCSVLAVT EQESTFQVDPPVPGLGKIARDEIDRRAAKVHIPSLLVSGALQVRSPNGKTYSERLSAARSEKELSAIFDDFIGSVPMGRT LFSGFNPVHTGGPMQVSIEFAEQHAKDYPYPVDGTIRREVFSRRGGMYFGIAHLLGYPVSYREPLYRFADFNAGWYASRN AAFQNAVSRASGIPLALDGDLIRPGAIMPGSTELAVRTLGKSLGMRNPVIRDQLEKGDSLAFEETKLYQRVFELAERAEG KTLPRAVLPGIVLQSPKITRKLTTAWFAKRVDERYRRCMAKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786576, Length=350, Percent_Identity=62.5714285714286, Blast_Score=462, Evalue=1e-131,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011673 - ProDom: PD041438 [H]
Pfam domain/function: PF07759 DUF1615 [H]
EC number: NA
Molecular weight: Translated: 39731; Mature: 39731
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTPRLFVSLAALLVLAGCAGQRSEEPAPRPPAEVKAQIVRLLPAKTVDRQGWATDIYAA CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH FAAQGISPTTQNLCSVLAVTEQESTFQVDPPVPGLGKIARDEIDRRAAKVHIPSLLVSGA HHHCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC LQVRSPNGKTYSERLSAARSEKELSAIFDDFIGSVPMGRTLFSGFNPVHTGGPMQVSIEF CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCEEEEEHH AEQHAKDYPYPVDGTIRREVFSRRGGMYFGIAHLLGYPVSYREPLYRFADFNAGWYASRN HHHHCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHCCCCHHHHHHHHHHCCCCCCCCCCH AAFQNAVSRASGIPLALDGDLIRPGAIMPGSTELAVRTLGKSLGMRNPVIRDQLEKGDSL HHHHHHHHHHCCCCEEECCCEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCC AFEETKLYQRVFELAERAEGKTLPRAVLPGIVLQSPKITRKLTTAWFAKRVDERYRRCMA HHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC KG CC >Mature Secondary Structure MHTPRLFVSLAALLVLAGCAGQRSEEPAPRPPAEVKAQIVRLLPAKTVDRQGWATDIYAA CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH FAAQGISPTTQNLCSVLAVTEQESTFQVDPPVPGLGKIARDEIDRRAAKVHIPSLLVSGA HHHCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC LQVRSPNGKTYSERLSAARSEKELSAIFDDFIGSVPMGRTLFSGFNPVHTGGPMQVSIEF CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCEEEEEHH AEQHAKDYPYPVDGTIRREVFSRRGGMYFGIAHLLGYPVSYREPLYRFADFNAGWYASRN HHHHCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHCCCCHHHHHHHHHHCCCCCCCCCCH AAFQNAVSRASGIPLALDGDLIRPGAIMPGSTELAVRTLGKSLGMRNPVIRDQLEKGDSL HHHHHHHHHHCCCCEEECCCEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCC AFEETKLYQRVFELAERAEGKTLPRAVLPGIVLQSPKITRKLTTAWFAKRVDERYRRCMA HHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC KG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]