Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is yaiW [H]

Identifier: 77459971

GI number: 77459971

Start: 4236609

End: 4237697

Strand: Reverse

Name: yaiW [H]

Synonym: Pfl01_3749

Alternate gene names: 77459971

Gene position: 4237697-4236609 (Counterclockwise)

Preceding gene: 77459973

Following gene: 77459958

Centisome position: 65.82

GC content: 64.65

Gene sequence:

>1089_bases
ATGCACACCCCACGATTATTCGTCAGCCTCGCCGCGCTGCTGGTACTGGCCGGTTGCGCCGGTCAACGCAGCGAAGAACC
GGCGCCGCGCCCGCCCGCCGAGGTCAAGGCGCAGATCGTGCGCCTGCTGCCGGCGAAAACCGTCGACCGCCAGGGCTGGG
CCACTGACATCTACGCTGCTTTCGCCGCTCAGGGCATCAGCCCGACCACGCAGAATCTGTGTTCGGTGCTGGCCGTCACC
GAGCAGGAATCCACCTTTCAGGTCGATCCGCCAGTGCCGGGCCTGGGCAAGATCGCCCGTGACGAAATCGACCGCCGCGC
CGCCAAGGTGCATATCCCGAGCCTGTTGGTCAGCGGCGCCTTGCAGGTGCGTTCGCCGAACGGCAAGACCTATAGCGAAC
GCCTGAGCGCCGCCCGCAGCGAAAAGGAATTGAGCGCGATTTTCGACGACTTCATCGGCTCGGTGCCGATGGGCCGGACA
CTGTTCAGCGGTTTCAACCCGGTGCACACCGGCGGGCCGATGCAGGTCAGCATCGAATTCGCCGAGCAGCATGCCAAGGA
CTATCCGTACCCGGTGGACGGGACGATTCGTCGCGAGGTGTTCAGCCGTCGCGGCGGCATGTATTTCGGCATCGCCCATT
TGCTTGGTTATCCAGTGAGTTATCGCGAGCCGCTGTACCGCTTCGCCGACTTCAACGCCGGCTGGTACGCCAGTCGCAAT
GCGGCGTTTCAGAACGCGGTCAGCCGGGCGTCGGGGATTCCGCTGGCGCTGGATGGCGACCTGATCCGCCCGGGCGCGAT
CATGCCGGGCAGCACTGAACTGGCGGTGCGCACCCTCGGCAAATCCCTGGGCATGCGCAATCCGGTGATCCGCGATCAAC
TGGAGAAGGGCGATAGCCTGGCCTTCGAGGAGACCAAACTGTATCAACGGGTCTTCGAACTGGCGGAGCGTGCGGAAGGC
AAGACATTGCCCCGTGCGGTGCTGCCGGGCATCGTGCTGCAGAGCCCGAAGATCACCCGCAAACTGACCACGGCGTGGTT
TGCCAAACGGGTCGACGAGCGTTATCGGCGCTGCATGGCCAAGGGCTGA

Upstream 100 bases:

>100_bases
CAAACGGGGCGATGGAACAGCGCCGCTGGCCCGCAGTCCTATCCTGCACCCTGCGATTGAGCGTAGGGTTAACCCGGCTC
AACGGACTGGATGAAGCGTT

Downstream 100 bases:

>100_bases
GGACGATCAGACAGGCATAAAAAAACCCGGCTGACGGGAGCCGGGTTTTTTCTGGGTTGTTGCGATCAAGCCATTCATTC
AGGCAACGCGGCGTTCGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MHTPRLFVSLAALLVLAGCAGQRSEEPAPRPPAEVKAQIVRLLPAKTVDRQGWATDIYAAFAAQGISPTTQNLCSVLAVT
EQESTFQVDPPVPGLGKIARDEIDRRAAKVHIPSLLVSGALQVRSPNGKTYSERLSAARSEKELSAIFDDFIGSVPMGRT
LFSGFNPVHTGGPMQVSIEFAEQHAKDYPYPVDGTIRREVFSRRGGMYFGIAHLLGYPVSYREPLYRFADFNAGWYASRN
AAFQNAVSRASGIPLALDGDLIRPGAIMPGSTELAVRTLGKSLGMRNPVIRDQLEKGDSLAFEETKLYQRVFELAERAEG
KTLPRAVLPGIVLQSPKITRKLTTAWFAKRVDERYRRCMAKG

Sequences:

>Translated_362_residues
MHTPRLFVSLAALLVLAGCAGQRSEEPAPRPPAEVKAQIVRLLPAKTVDRQGWATDIYAAFAAQGISPTTQNLCSVLAVT
EQESTFQVDPPVPGLGKIARDEIDRRAAKVHIPSLLVSGALQVRSPNGKTYSERLSAARSEKELSAIFDDFIGSVPMGRT
LFSGFNPVHTGGPMQVSIEFAEQHAKDYPYPVDGTIRREVFSRRGGMYFGIAHLLGYPVSYREPLYRFADFNAGWYASRN
AAFQNAVSRASGIPLALDGDLIRPGAIMPGSTELAVRTLGKSLGMRNPVIRDQLEKGDSLAFEETKLYQRVFELAERAEG
KTLPRAVLPGIVLQSPKITRKLTTAWFAKRVDERYRRCMAKG
>Mature_362_residues
MHTPRLFVSLAALLVLAGCAGQRSEEPAPRPPAEVKAQIVRLLPAKTVDRQGWATDIYAAFAAQGISPTTQNLCSVLAVT
EQESTFQVDPPVPGLGKIARDEIDRRAAKVHIPSLLVSGALQVRSPNGKTYSERLSAARSEKELSAIFDDFIGSVPMGRT
LFSGFNPVHTGGPMQVSIEFAEQHAKDYPYPVDGTIRREVFSRRGGMYFGIAHLLGYPVSYREPLYRFADFNAGWYASRN
AAFQNAVSRASGIPLALDGDLIRPGAIMPGSTELAVRTLGKSLGMRNPVIRDQLEKGDSLAFEETKLYQRVFELAERAEG
KTLPRAVLPGIVLQSPKITRKLTTAWFAKRVDERYRRCMAKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786576, Length=350, Percent_Identity=62.5714285714286, Blast_Score=462, Evalue=1e-131,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011673
- ProDom:   PD041438 [H]

Pfam domain/function: PF07759 DUF1615 [H]

EC number: NA

Molecular weight: Translated: 39731; Mature: 39731

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTPRLFVSLAALLVLAGCAGQRSEEPAPRPPAEVKAQIVRLLPAKTVDRQGWATDIYAA
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
FAAQGISPTTQNLCSVLAVTEQESTFQVDPPVPGLGKIARDEIDRRAAKVHIPSLLVSGA
HHHCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
LQVRSPNGKTYSERLSAARSEKELSAIFDDFIGSVPMGRTLFSGFNPVHTGGPMQVSIEF
CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCEEEEEHH
AEQHAKDYPYPVDGTIRREVFSRRGGMYFGIAHLLGYPVSYREPLYRFADFNAGWYASRN
HHHHCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHCCCCHHHHHHHHHHCCCCCCCCCCH
AAFQNAVSRASGIPLALDGDLIRPGAIMPGSTELAVRTLGKSLGMRNPVIRDQLEKGDSL
HHHHHHHHHHCCCCEEECCCEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
AFEETKLYQRVFELAERAEGKTLPRAVLPGIVLQSPKITRKLTTAWFAKRVDERYRRCMA
HHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
KG
CC
>Mature Secondary Structure
MHTPRLFVSLAALLVLAGCAGQRSEEPAPRPPAEVKAQIVRLLPAKTVDRQGWATDIYAA
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
FAAQGISPTTQNLCSVLAVTEQESTFQVDPPVPGLGKIARDEIDRRAAKVHIPSLLVSGA
HHHCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
LQVRSPNGKTYSERLSAARSEKELSAIFDDFIGSVPMGRTLFSGFNPVHTGGPMQVSIEF
CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCEEEEEHH
AEQHAKDYPYPVDGTIRREVFSRRGGMYFGIAHLLGYPVSYREPLYRFADFNAGWYASRN
HHHHCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHCCCCHHHHHHHHHHCCCCCCCCCCH
AAFQNAVSRASGIPLALDGDLIRPGAIMPGSTELAVRTLGKSLGMRNPVIRDQLEKGDSL
HHHHHHHHHHCCCCEEECCCEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
AFEETKLYQRVFELAERAEGKTLPRAVLPGIVLQSPKITRKLTTAWFAKRVDERYRRCMA
HHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
KG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]