| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459952
Identifier: 77459952
GI number: 77459952
Start: 4215250
End: 4215999
Strand: Reverse
Name: 77459952
Synonym: Pfl01_3730
Alternate gene names: NA
Gene position: 4215999-4215250 (Counterclockwise)
Preceding gene: 77459956
Following gene: 77459951
Centisome position: 65.48
GC content: 59.33
Gene sequence:
>750_bases ATGCCGAGAGTTTTGCACCCAATCGCTGCATTCATTCATCGCCCGTGCCTGCTGCTGGCCTGCCTGTCGACGCTGCTGTT CGGCGGTTGCAGCCATCAGGACGGCAACAATTTCATCAGCCAGATGCGCGAGGGCAGGCCTCAGGAATTTCTCCAGACCA GCGTCGACCGCATGGCTACGCTGGCGATGCGCGACAACCTCGACAGCCTCTATCGCTTGATGGGCAAGTTGTATTTGCGT AACCCGGAAGAACTGCGCAAATCCGGTTTTCTCGACATTCGCACGGCGGTCAAGCAGGTGCGACTGGCCATCGAGCAACA GCAACCCTTGCCGACCCTCGGCGGCAAAAAGGATCTGGCAGCGCTGAGCTATGCCATGAGCCCGGAATTCCTCGGCGACC GGGTCGGCGCGTTCATCTATGCGATCGGCAGCATGCTGGTCACCGCCCACGGCAACCGCACCGAGTTCTACATGACCGAT GCGATCAACCCGACCTTCGTCAACAACGCCGCGCGCAACATCGAGAAAGCCACTTGGATCCTCGCCCAGCGGCAGAACAA GGATGGCCAGCCGCTGCTGTTTTCCAATGAGATTTCCGAGGAGGGCAGCAACCTGAGTTTCGCCACGGAGTTCGGCAAAG TCGTGGCGCGTCTGGATCTGCTGACCCAGATGCTCGACGAGCGCTACCGGCGCATCGGACTGAATTACGCCCAGAGCCTG CTGTTTTTGAATTTTTTGCCCGTGCAGTGA
Upstream 100 bases:
>100_bases GAATCCACCCTGGCACCGCACTTTTGCGAAATCCCCGGCTCTATCCATGGCCAGGTTGCGGTGACTTCCGCTGCACAGGA ACGTGTCCGTCAAAGAATTC
Downstream 100 bases:
>100_bases AATGGCATAACGATAGATCCGATCGATATAGGGCGTTATAAGAAAACTGGTTATGCTGCGGGCCGGATTTTTCCTGTGGT TTGTCTGGACGTCTTAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MPRVLHPIAAFIHRPCLLLACLSTLLFGGCSHQDGNNFISQMREGRPQEFLQTSVDRMATLAMRDNLDSLYRLMGKLYLR NPEELRKSGFLDIRTAVKQVRLAIEQQQPLPTLGGKKDLAALSYAMSPEFLGDRVGAFIYAIGSMLVTAHGNRTEFYMTD AINPTFVNNAARNIEKATWILAQRQNKDGQPLLFSNEISEEGSNLSFATEFGKVVARLDLLTQMLDERYRRIGLNYAQSL LFLNFLPVQ
Sequences:
>Translated_249_residues MPRVLHPIAAFIHRPCLLLACLSTLLFGGCSHQDGNNFISQMREGRPQEFLQTSVDRMATLAMRDNLDSLYRLMGKLYLR NPEELRKSGFLDIRTAVKQVRLAIEQQQPLPTLGGKKDLAALSYAMSPEFLGDRVGAFIYAIGSMLVTAHGNRTEFYMTD AINPTFVNNAARNIEKATWILAQRQNKDGQPLLFSNEISEEGSNLSFATEFGKVVARLDLLTQMLDERYRRIGLNYAQSL LFLNFLPVQ >Mature_248_residues PRVLHPIAAFIHRPCLLLACLSTLLFGGCSHQDGNNFISQMREGRPQEFLQTSVDRMATLAMRDNLDSLYRLMGKLYLRN PEELRKSGFLDIRTAVKQVRLAIEQQQPLPTLGGKKDLAALSYAMSPEFLGDRVGAFIYAIGSMLVTAHGNRTEFYMTDA INPTFVNNAARNIEKATWILAQRQNKDGQPLLFSNEISEEGSNLSFATEFGKVVARLDLLTQMLDERYRRIGLNYAQSLL FLNFLPVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28104; Mature: 27973
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRVLHPIAAFIHRPCLLLACLSTLLFGGCSHQDGNNFISQMREGRPQEFLQTSVDRMAT CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH LAMRDNLDSLYRLMGKLYLRNPEELRKSGFLDIRTAVKQVRLAIEQQQPLPTLGGKKDLA HHHHCCHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH ALSYAMSPEFLGDRVGAFIYAIGSMLVTAHGNRTEFYMTDAINPTFVNNAARNIEKATWI HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH LAQRQNKDGQPLLFSNEISEEGSNLSFATEFGKVVARLDLLTQMLDERYRRIGLNYAQSL HHHHCCCCCCCEEECCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFLNFLPVQ HHHHHCCCC >Mature Secondary Structure PRVLHPIAAFIHRPCLLLACLSTLLFGGCSHQDGNNFISQMREGRPQEFLQTSVDRMAT CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH LAMRDNLDSLYRLMGKLYLRNPEELRKSGFLDIRTAVKQVRLAIEQQQPLPTLGGKKDLA HHHHCCHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH ALSYAMSPEFLGDRVGAFIYAIGSMLVTAHGNRTEFYMTDAINPTFVNNAARNIEKATWI HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH LAQRQNKDGQPLLFSNEISEEGSNLSFATEFGKVVARLDLLTQMLDERYRRIGLNYAQSL HHHHCCCCCCCEEECCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFLNFLPVQ HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA