| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77459743
Identifier: 77459743
GI number: 77459743
Start: 4000804
End: 4001214
Strand: Reverse
Name: 77459743
Synonym: Pfl01_3521
Alternate gene names: NA
Gene position: 4001214-4000804 (Counterclockwise)
Preceding gene: 77459744
Following gene: 77459740
Centisome position: 62.15
GC content: 60.83
Gene sequence:
>411_bases ATGGCAACTGCATCAGCAACCATCGACATTCCGGCTTCGGCCGAACAGGTCTGGCAATTGATTGGCGGCTTCAACAGCCT GCCGGACTGGCTCCCGTTCATTCCCAATAGCGAACTGAGTGAAGGCGGGCGTGTGCGCACCCTGCAAACCGCTGACGGCG GGGTGGTGGTCGAGCGTCTGGAGACGTTCGATAACGCGGGCAAGACTTACAGCTATTCGATTCTGCAGGCACCGTTTCCG GCTACCGATTATCTGGCGACGATTCGTGTTGAAGCCCAGGGGCAGGGCGCGAAGGTGACGTGGTCGGGACGGTTTACGGC CAAGGGCGTGAGCGAGGAGGAAGTGGTGGCGCTGTTCAGCGGGATCTATCAGGGTGGGCTCGAGGCACTGCGCGCCAACT ACCCCGCTTAA
Upstream 100 bases:
>100_bases TCACCGCTGTCTTCAGCTACCACTGGCGCCGCGTTGCGGGTCGACGGTGGCGTGGTCGACAGCCTGACTATCTGAATTTA TCTAGAGAGACTTTTTATTT
Downstream 100 bases:
>100_bases GTTGATCGCTGATCGTTCCCACGCGGCGTGGGAACGATCTCTTCAAGACTGTGAAATCAGACTCTGCCGACAATCCAGCA CCAGCTTCGCCCCGCCCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MATASATIDIPASAEQVWQLIGGFNSLPDWLPFIPNSELSEGGRVRTLQTADGGVVVERLETFDNAGKTYSYSILQAPFP ATDYLATIRVEAQGQGAKVTWSGRFTAKGVSEEEVVALFSGIYQGGLEALRANYPA
Sequences:
>Translated_136_residues MATASATIDIPASAEQVWQLIGGFNSLPDWLPFIPNSELSEGGRVRTLQTADGGVVVERLETFDNAGKTYSYSILQAPFP ATDYLATIRVEAQGQGAKVTWSGRFTAKGVSEEEVVALFSGIYQGGLEALRANYPA >Mature_135_residues ATASATIDIPASAEQVWQLIGGFNSLPDWLPFIPNSELSEGGRVRTLQTADGGVVVERLETFDNAGKTYSYSILQAPFPA TDYLATIRVEAQGQGAKVTWSGRFTAKGVSEEEVVALFSGIYQGGLEALRANYPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14545; Mature: 14414
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATASATIDIPASAEQVWQLIGGFNSLPDWLPFIPNSELSEGGRVRTLQTADGGVVVERL CCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHH ETFDNAGKTYSYSILQAPFPATDYLATIRVEAQGQGAKVTWSGRFTAKGVSEEEVVALFS HHHCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCCCEEEECCCEEECCCCHHHHHHHHH GIYQGGLEALRANYPA HHHHHHHHHHHCCCCC >Mature Secondary Structure ATASATIDIPASAEQVWQLIGGFNSLPDWLPFIPNSELSEGGRVRTLQTADGGVVVERL CCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHH ETFDNAGKTYSYSILQAPFPATDYLATIRVEAQGQGAKVTWSGRFTAKGVSEEEVVALFS HHHCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCCCEEEECCCEEECCCCHHHHHHHHH GIYQGGLEALRANYPA HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA